EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022117 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 4352 bases
Position: chr17:21637700-21642051
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0045044	Ribosomal_L3	PF00297.22	3.5e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0045044	-	599	-	MGP_SPRETEiJ_P0045044	133 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0022117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0022117	-	100	77.444	MGP_SPRETEiJ_G0020930	Rpl3	61	76.522

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022117	-	100	78.947	ENSG00000100316	RPL3	51	78.947	Homo_sapiens
MGP_SPRETEiJ_G0022117	-	100	98.496	ENSG00000140986	RPL3L	100	100.000	Homo_sapiens
MGP_SPRETEiJ_G0022117	-	100	79.699	ENSATEG00000021992	rpl3	51	79.710	Anabas_testudineus
MGP_SPRETEiJ_G0022117	-	54	76.389	ENSCHIG00000010410	-	53	76.389	Capra_hircus
MGP_SPRETEiJ_G0022117	-	100	78.195	ENSCPOG00000010038	RPL3	62	77.391	Cavia_porcellus
MGP_SPRETEiJ_G0022117	-	100	75.188	ENSCANG00000028822	-	52	70.370	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0022117	-	100	65.414	FBgn0020910	RpL3	50	63.768	Drosophila_melanogaster
MGP_SPRETEiJ_G0022117	-	100	78.947	ENSGAFG00000010760	rpl3	53	78.261	Gambusia_affinis
MGP_SPRETEiJ_G0022117	-	100	78.195	ENSHGLG00000010440	RPL3	66	77.391	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0022117	-	100	78.195	ENSHGLG00100003777	RPL3	66	77.391	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0022117	-	100	77.444	ENSIPUG00000010685	RL3	51	78.261	Ictalurus_punctatus
MGP_SPRETEiJ_G0022117	-	100	76.692	ENSLBEG00000004376	rpl3	53	78.261	Labrus_bergylta
MGP_SPRETEiJ_G0022117	-	89	67.200	ENSMMUG00000030339	-	60	67.200	Macaca_mulatta
MGP_SPRETEiJ_G0022117	-	59	73.077	ENSMNEG00000035597	-	53	73.077	Macaca_nemestrina
MGP_SPRETEiJ_G0022117	-	100	81.203	ENSMAMG00000020741	rpl3	60	69.136	Mastacembelus_armatus
MGP_SPRETEiJ_G0022117	-	100	77.444	MGP_CAROLIEiJ_G0020032	-	61	76.522	Mus_caroli
MGP_SPRETEiJ_G0022117	-	100	99.248	MGP_CAROLIEiJ_G0021203	Rpl3l	100	99.248	Mus_caroli
MGP_SPRETEiJ_G0022117	-	100	99.248	ENSMUSG00000002500	Rpl3l	100	99.248	Mus_musculus
MGP_SPRETEiJ_G0022117	-	100	77.444	ENSMUSG00000060036	Rpl3	61	76.522	Mus_musculus
MGP_SPRETEiJ_G0022117	-	100	77.444	MGP_PahariEiJ_G0020034	Rpl3	61	76.522	Mus_pahari
MGP_SPRETEiJ_G0022117	-	100	98.496	MGP_PahariEiJ_G0023520	Rpl3l	100	98.496	Mus_pahari
MGP_SPRETEiJ_G0022117	-	100	78.195	ENSORLG00015006805	rpl3	53	79.710	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0022117	-	62	74.390	ENSPANG00000024807	-	57	74.390	Papio_anubis
MGP_SPRETEiJ_G0022117	-	53	80.000	ENSPMGG00000020646	-	56	80.000	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0022117	-	100	79.699	ENSPMEG00000007708	rpl3	53	78.261	Poecilia_mexicana
MGP_SPRETEiJ_G0022117	-	58	75.325	ENSRROG00000013960	-	53	75.325	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0022117	-	100	78.195	ENSSDUG00000021612	rpl3	53	79.710	Seriola_dumerili
MGP_SPRETEiJ_G0022117	-	71	58.947	ENSSLDG00000005527	-	52	58.947	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0022117	-	100	77.444	ENSTRUG00000000144	rpl3	51	78.261	Takifugu_rubripes