EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022221 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 14028 bases
Position: chr17:24909491-24923518
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0045484	zf-U1	PF06220.12	1.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0045484	-	695	-	MGP_SPRETEiJ_P0045484	120 (aa)	-	-
MGP_SPRETEiJ_T0045485	-	5105	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0022221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022221's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSG00000124562	SNRPC	74	99.153	Homo_sapiens
MGP_SPRETEiJ_G0022221	-	97	98.276	ENSAMEG00000000963	SNRPC	64	98.276	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0022221	-	80	92.708	ENSACAG00000015721	SNRPC	52	94.681	Anolis_carolinensis
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSANAG00000019696	-	74	99.153	Aotus_nancymaae
MGP_SPRETEiJ_G0022221	-	80	90.625	ENSANAG00000020588	-	56	91.579	Aotus_nancymaae
MGP_SPRETEiJ_G0022221	-	96	95.652	ENSANAG00000019726	-	71	95.652	Aotus_nancymaae
MGP_SPRETEiJ_G0022221	-	80	92.708	ENSANAG00000019157	-	60	92.708	Aotus_nancymaae
MGP_SPRETEiJ_G0022221	-	98	77.119	ENSANAG00000021444	-	61	82.292	Aotus_nancymaae
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSANAG00000007843	-	74	99.153	Aotus_nancymaae
MGP_SPRETEiJ_G0022221	-	94	83.186	ENSANAG00000021026	-	64	84.071	Aotus_nancymaae
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSBTAG00000024549	SNRPC	74	99.153	Bos_taurus
MGP_SPRETEiJ_G0022221	-	68	60.494	WBGene00017238	F08B4.7	92	47.328	Caenorhabditis_elegans
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSCJAG00000043055	-	74	99.153	Callithrix_jacchus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSCJAG00000015321	-	74	99.153	Callithrix_jacchus
MGP_SPRETEiJ_G0022221	-	98	96.610	ENSCJAG00000041822	-	74	96.610	Callithrix_jacchus
MGP_SPRETEiJ_G0022221	-	98	97.458	ENSCAFG00000028988	-	74	97.458	Canis_familiaris
MGP_SPRETEiJ_G0022221	-	98	96.610	ENSCAFG00000031775	-	74	96.610	Canis_familiaris
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSCAFG00000001231	-	93	99.153	Canis_familiaris
MGP_SPRETEiJ_G0022221	-	98	98.305	ENSCAFG00020026577	-	66	98.305	Canis_lupus_dingo
MGP_SPRETEiJ_G0022221	-	98	96.610	ENSCAFG00020017383	-	74	96.610	Canis_lupus_dingo
MGP_SPRETEiJ_G0022221	-	80	94.792	ENSCAFG00020005758	-	59	95.745	Canis_lupus_dingo
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSCAFG00020005945	-	74	99.153	Canis_lupus_dingo
MGP_SPRETEiJ_G0022221	-	98	98.305	ENSCHIG00000012087	-	74	98.305	Capra_hircus
MGP_SPRETEiJ_G0022221	-	83	93.000	ENSTSYG00000029745	-	50	93.000	Carlito_syrichta
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSTSYG00000011216	-	74	99.153	Carlito_syrichta
MGP_SPRETEiJ_G0022221	-	80	80.208	ENSTSYG00000025721	-	60	70.408	Carlito_syrichta
MGP_SPRETEiJ_G0022221	-	84	99.010	ENSCAPG00000005161	SNRPC	71	99.010	Cavia_aperea
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSCPOG00000008563	SNRPC	74	99.153	Cavia_porcellus
MGP_SPRETEiJ_G0022221	-	78	94.681	ENSCCAG00000036059	-	54	94.792	Cebus_capucinus
MGP_SPRETEiJ_G0022221	-	81	91.753	ENSCCAG00000022751	-	59	91.753	Cebus_capucinus
MGP_SPRETEiJ_G0022221	-	100	68.939	ENSCCAG00000028293	-	59	89.610	Cebus_capucinus
MGP_SPRETEiJ_G0022221	-	78	65.591	ENSCCAG00000022209	-	53	65.591	Cebus_capucinus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSCATG00000035787	SNRPC	74	99.153	Cercocebus_atys
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSCLAG00000016920	SNRPC	74	99.153	Chinchilla_lanigera
MGP_SPRETEiJ_G0022221	-	98	82.051	ENSCLAG00000010242	-	58	83.158	Chinchilla_lanigera
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSCSAG00000009821	SNRPC	66	99.153	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0022221	-	98	97.458	ENSCPBG00000027142	SNRPC	74	97.458	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0022221	-	60	77.778	ENSCING00000021229	ci-zf(matrin)-4	51	85.484	Ciona_intestinalis
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSCANG00000028035	SNRPC	74	99.153	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0022221	-	80	80.208	ENSCGRG00001021483	-	57	70.833	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0022221	-	98	100.000	ENSCGRG00001009011	-	74	100.000	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0022221	-	98	99.138	ENSCGRG00000005005	Snrpc	73	99.138	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0022221	-	98	97.458	ENSDNOG00000034699	-	74	97.458	Dasypus_novemcinctus
MGP_SPRETEiJ_G0022221	-	100	97.500	ENSDNOG00000042403	-	95	97.500	Dasypus_novemcinctus
MGP_SPRETEiJ_G0022221	-	64	94.805	ENSDORG00000029823	-	56	94.805	Dipodomys_ordii
MGP_SPRETEiJ_G0022221	-	69	93.976	ENSETEG00000008756	-	75	93.506	Echinops_telfairi
MGP_SPRETEiJ_G0022221	-	64	94.805	ENSETEG00000008268	-	62	94.792	Echinops_telfairi
MGP_SPRETEiJ_G0022221	-	64	90.909	ENSETEG00000011265	-	62	91.667	Echinops_telfairi
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSEASG00005021007	SNRPC	74	99.153	Equus_asinus_asinus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSECAG00000026848	SNRPC	74	99.153	Equus_caballus
MGP_SPRETEiJ_G0022221	-	98	98.305	ENSFCAG00000031775	-	69	98.305	Felis_catus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSFCAG00000044077	-	74	99.153	Felis_catus
MGP_SPRETEiJ_G0022221	-	98	98.305	ENSFALG00000003756	SNRPC	74	98.305	Ficedula_albicollis
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSFDAG00000018111	SNRPC	74	99.153	Fukomys_damarensis
MGP_SPRETEiJ_G0022221	-	52	100.000	ENSFHEG00000016667	snrpc	55	100.000	Fundulus_heteroclitus
MGP_SPRETEiJ_G0022221	-	98	95.798	ENSGALG00000002773	SNRPC	74	95.798	Gallus_gallus
MGP_SPRETEiJ_G0022221	-	98	97.458	ENSGAGG00000003063	SNRPC	74	97.458	Gopherus_agassizii
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSGGOG00000012499	SNRPC	74	99.153	Gorilla_gorilla
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSHGLG00000013981	SNRPC	74	99.153	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0022221	-	93	80.357	ENSHGLG00000005871	-	54	87.013	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSHGLG00100009478	SNRPC	74	99.153	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0022221	-	98	96.610	ENSHGLG00100017764	-	74	96.610	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSSTOG00000013786	SNRPC	74	99.153	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0022221	-	98	100.000	ENSJJAG00000021741	Snrpc	74	100.000	Jaculus_jaculus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSLAFG00000013534	SNRPC	74	99.153	Loxodonta_africana
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSMFAG00000031764	-	74	99.153	Macaca_fascicularis
MGP_SPRETEiJ_G0022221	-	98	98.305	ENSMFAG00000030525	-	74	98.305	Macaca_fascicularis
MGP_SPRETEiJ_G0022221	-	98	97.458	ENSMMUG00000000869	-	72	97.458	Macaca_mulatta
MGP_SPRETEiJ_G0022221	-	78	90.426	ENSMMUG00000045425	-	60	90.625	Macaca_mulatta
MGP_SPRETEiJ_G0022221	-	98	98.305	ENSMMUG00000039415	-	74	98.305	Macaca_mulatta
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSMNEG00000032731	SNRPC	74	99.153	Macaca_nemestrina
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSMLEG00000033916	-	74	99.153	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0022221	-	61	95.890	ENSMLEG00000040224	-	53	93.478	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0022221	-	98	95.763	ENSMGAG00000006054	SNRPC	74	95.763	Meleagris_gallopavo
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSMICG00000032183	-	74	99.153	Microcebus_murinus
MGP_SPRETEiJ_G0022221	-	98	98.305	ENSMICG00000007339	-	74	98.305	Microcebus_murinus
MGP_SPRETEiJ_G0022221	-	64	98.701	ENSMICG00000009130	-	53	98.701	Microcebus_murinus
MGP_SPRETEiJ_G0022221	-	98	100.000	ENSMOCG00000017609	Snrpc	74	100.000	Microtus_ochrogaster
MGP_SPRETEiJ_G0022221	-	98	97.458	ENSMODG00000013904	-	74	97.458	Monodelphis_domestica
MGP_SPRETEiJ_G0022221	-	98	100.000	MGP_CAROLIEiJ_G0021308	Snrpc	74	100.000	Mus_caroli
MGP_SPRETEiJ_G0022221	-	98	100.000	ENSMUSG00000024217	Snrpc	74	100.000	Mus_musculus
MGP_SPRETEiJ_G0022221	-	97	98.276	ENSMPUG00000003210	SNRPC	73	98.276	Mustela_putorius_furo
MGP_SPRETEiJ_G0022221	-	97	98.276	ENSMLUG00000002488	SNRPC	73	98.276	Myotis_lucifugus
MGP_SPRETEiJ_G0022221	-	98	100.000	ENSNGAG00000019686	Snrpc	74	100.000	Nannospalax_galili
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSNLEG00000034810	SNRPC	74	99.153	Nomascus_leucogenys
MGP_SPRETEiJ_G0022221	-	84	98.020	ENSMEUG00000009300	SNRPC	71	98.020	Notamacropus_eugenii
MGP_SPRETEiJ_G0022221	-	81	92.784	ENSODEG00000006008	-	69	93.750	Octodon_degus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSODEG00000017080	-	74	99.153	Octodon_degus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSODEG00000020370	-	74	99.153	Octodon_degus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSODEG00000018985	-	74	99.153	Octodon_degus
MGP_SPRETEiJ_G0022221	-	98	98.305	ENSODEG00000020201	-	74	98.305	Octodon_degus
MGP_SPRETEiJ_G0022221	-	98	98.305	ENSODEG00000019633	-	74	98.305	Octodon_degus
MGP_SPRETEiJ_G0022221	-	86	92.523	ENSOANG00000003405	SNRPC	72	92.523	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSOCUG00000026668	-	74	99.153	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0022221	-	98	97.458	ENSOCUG00000023292	-	74	97.458	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0022221	-	98	98.305	ENSOCUG00000026430	-	73	98.305	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0022221	-	98	96.610	ENSOGAG00000026269	-	74	96.610	Otolemur_garnettii
MGP_SPRETEiJ_G0022221	-	97	98.276	ENSOGAG00000008755	-	65	98.276	Otolemur_garnettii
MGP_SPRETEiJ_G0022221	-	87	81.731	ENSOGAG00000028405	-	67	78.846	Otolemur_garnettii
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSOARG00000010823	SNRPC	74	99.153	Ovis_aries
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSPPAG00000043871	SNRPC	74	99.153	Pan_paniscus
MGP_SPRETEiJ_G0022221	-	94	56.250	ENSPPRG00000010967	-	83	54.472	Panthera_pardus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSPPRG00000008647	-	74	99.153	Panthera_pardus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSPTIG00000021867	-	74	99.153	Panthera_tigris_altaica
MGP_SPRETEiJ_G0022221	-	75	80.000	ENSPTIG00000013329	-	62	81.053	Panthera_tigris_altaica
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSPTRG00000018070	SNRPC	74	99.153	Pan_troglodytes
MGP_SPRETEiJ_G0022221	-	78	89.362	ENSPANG00000018228	-	56	89.583	Papio_anubis
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSPANG00000022802	-	74	99.153	Papio_anubis
MGP_SPRETEiJ_G0022221	-	98	100.000	ENSPEMG00000010773	Snrpc	74	100.000	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0022221	-	69	98.795	ENSPPYG00000029902	-	84	98.795	Pongo_abelii
MGP_SPRETEiJ_G0022221	-	97	98.276	ENSPCAG00000016885	SNRPC	66	98.276	Procavia_capensis
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSPCOG00000004904	SNRPC	74	99.153	Propithecus_coquereli
MGP_SPRETEiJ_G0022221	-	97	97.414	ENSPVAG00000015597	SNRPC	64	97.414	Pteropus_vampyrus
MGP_SPRETEiJ_G0022221	-	98	100.000	ENSRNOG00000000493	Snrpc	74	100.000	Rattus_norvegicus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSRBIG00000037567	-	74	99.153	Rhinopithecus_bieti
MGP_SPRETEiJ_G0022221	-	98	98.305	ENSRBIG00000022998	-	74	98.305	Rhinopithecus_bieti
MGP_SPRETEiJ_G0022221	-	98	98.305	ENSRBIG00000014819	-	74	98.305	Rhinopithecus_bieti
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSRROG00000041300	SNRPC	74	99.153	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0022221	-	96	80.000	ENSSBOG00000032361	-	66	80.208	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSSBOG00000031528	-	74	99.153	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0022221	-	98	81.356	ENSSBOG00000023189	-	58	85.417	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0022221	-	64	89.610	ENSSHAG00000002972	-	93	65.625	Sarcophilus_harrisii
MGP_SPRETEiJ_G0022221	-	97	97.414	ENSSHAG00000000945	-	64	97.414	Sarcophilus_harrisii
MGP_SPRETEiJ_G0022221	-	98	97.458	ENSSPUG00000002502	SNRPC	74	97.458	Sphenodon_punctatus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSSSCG00000001531	SNRPC	74	99.153	Sus_scrofa
MGP_SPRETEiJ_G0022221	-	98	97.436	ENSTGUG00000001773	SNRPC	74	97.436	Taeniopygia_guttata
MGP_SPRETEiJ_G0022221	-	82	91.837	ENSTBEG00000013022	-	62	91.667	Tupaia_belangeri
MGP_SPRETEiJ_G0022221	-	80	90.625	ENSTBEG00000015356	-	68	90.625	Tupaia_belangeri
MGP_SPRETEiJ_G0022221	-	97	98.276	ENSTTRG00000007827	SNRPC	64	98.276	Tursiops_truncatus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSUAMG00000014125	SNRPC	80	99.153	Ursus_americanus
MGP_SPRETEiJ_G0022221	-	98	99.153	ENSUMAG00000010869	SNRPC	66	99.153	Ursus_maritimus
MGP_SPRETEiJ_G0022221	-	98	97.458	ENSVVUG00000021947	-	74	97.458	Vulpes_vulpes
MGP_SPRETEiJ_G0022221	-	94	93.805	ENSVVUG00000010467	-	52	95.699	Vulpes_vulpes