EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022381 (Gene tree)
Gene ID: -
Gene Symbol: Dxo
Alias: Dom3z
Full Name: decapping exoribonuclease
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 2185 bases
Position: chr17:32497115-32499299
Accession: 1890444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0046199	RAI1	PF08652.11	8.1e-23	1	1
MGP_SPRETEiJ_P0046190	RAI1	PF08652.11	8.3e-22	1	1
MGP_SPRETEiJ_P0046191	RAI1	PF08652.11	1.1e-21	1	1
MGP_SPRETEiJ_P0046192	RAI1	PF08652.11	1.1e-21	1	1
MGP_SPRETEiJ_P0046195	RAI1	PF08652.11	1.3e-11	1	1
MGP_SPRETEiJ_P0046200	RAI1	PF08652.11	5.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0046199	-	583	-	MGP_SPRETEiJ_P0046199	118 (aa)	-	UPI00021CF887
MGP_SPRETEiJ_T0046198	-	480	-	MGP_SPRETEiJ_P0046198	73 (aa)	-	-
MGP_SPRETEiJ_T0046191	-	1447	-	MGP_SPRETEiJ_P0046191	397 (aa)	-	-
MGP_SPRETEiJ_T0046190	-	1117	-	MGP_SPRETEiJ_P0046190	304 (aa)	-	-
MGP_SPRETEiJ_T0046193	-	956	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046192	-	1519	-	MGP_SPRETEiJ_P0046192	397 (aa)	-	-
MGP_SPRETEiJ_T0046195	-	738	-	MGP_SPRETEiJ_P0046195	245 (aa)	-	-
MGP_SPRETEiJ_T0046194	-	584	-	MGP_SPRETEiJ_P0046194	144 (aa)	-	-
MGP_SPRETEiJ_T0046197	-	427	-	MGP_SPRETEiJ_P0046197	60 (aa)	-	-
MGP_SPRETEiJ_T0046196	-	701	-	MGP_SPRETEiJ_P0046196	45 (aa)	-	UPI00021CF884
MGP_SPRETEiJ_T0046200	-	499	-	MGP_SPRETEiJ_P0046200	166 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0022381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022381's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022381	Dxo	100	91.525	ENSG00000204348	DXO	100	90.404	Homo_sapiens
MGP_SPRETEiJ_G0022381	Dxo	99	55.556	ENSAPOG00000017890	DXO	88	52.742	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0022381	Dxo	100	88.983	ENSAMEG00000002151	DXO	100	85.894	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0022381	Dxo	99	55.556	ENSAOCG00000001719	DXO	84	54.420	Amphiprion_ocellaris
MGP_SPRETEiJ_G0022381	Dxo	99	55.556	ENSAPEG00000012237	DXO	84	54.972	Amphiprion_percula
MGP_SPRETEiJ_G0022381	Dxo	99	52.991	ENSATEG00000024423	DXO	84	52.717	Anabas_testudineus
MGP_SPRETEiJ_G0022381	Dxo	100	61.864	ENSACAG00000012071	DXO	93	62.663	Anolis_carolinensis
MGP_SPRETEiJ_G0022381	Dxo	100	93.220	ENSANAG00000020757	DXO	92	90.657	Aotus_nancymaae
MGP_SPRETEiJ_G0022381	Dxo	100	55.085	ENSACLG00000027873	DXO	87	53.639	Astatotilapia_calliptera
MGP_SPRETEiJ_G0022381	Dxo	100	55.932	ENSAMXG00000032987	DXO	87	56.164	Astyanax_mexicanus
MGP_SPRETEiJ_G0022381	Dxo	100	92.373	ENSBTAG00000005588	DXO	100	86.683	Bos_taurus
MGP_SPRETEiJ_G0022381	Dxo	97	32.759	WBGene00001050	dom-3	63	32.714	Caenorhabditis_elegans
MGP_SPRETEiJ_G0022381	Dxo	100	92.373	ENSCJAG00000002246	DXO	100	90.909	Callithrix_jacchus
MGP_SPRETEiJ_G0022381	Dxo	100	88.983	ENSCAFG00000000694	DXO	99	85.870	Canis_familiaris
MGP_SPRETEiJ_G0022381	Dxo	100	88.983	ENSCAFG00020000953	DXO	100	86.650	Canis_lupus_dingo
MGP_SPRETEiJ_G0022381	Dxo	100	89.831	ENSCHIG00000024555	DXO	99	88.889	Capra_hircus
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSTSYG00000037337	DXO	100	87.879	Carlito_syrichta
MGP_SPRETEiJ_G0022381	Dxo	100	94.068	ENSCAPG00000008333	-	100	94.068	Cavia_aperea
MGP_SPRETEiJ_G0022381	Dxo	100	94.068	ENSCPOG00000015108	DXO	100	92.063	Cavia_porcellus
MGP_SPRETEiJ_G0022381	Dxo	100	93.220	ENSCCAG00000036575	DXO	100	91.667	Cebus_capucinus
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSCATG00000001700	DXO	100	89.899	Cercocebus_atys
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSCLAG00000006682	DXO	100	91.270	Chinchilla_lanigera
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSCSAG00000009007	DXO	100	89.899	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0022381	Dxo	100	61.017	ENSCPBG00000001233	DXO	92	64.641	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0022381	Dxo	92	42.202	ENSCING00000000512	-	99	39.617	Ciona_intestinalis
MGP_SPRETEiJ_G0022381	Dxo	81	53.333	ENSCSAVG00000009527	-	99	38.398	Ciona_savignyi
MGP_SPRETEiJ_G0022381	Dxo	100	89.831	ENSCANG00000039839	DXO	100	89.646	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0022381	Dxo	100	96.032	ENSCGRG00001001718	Dxo	100	96.032	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0022381	Dxo	99	57.265	ENSCSEG00000014295	DXO	87	53.100	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0022381	Dxo	100	55.833	ENSCVAG00000019072	DXO	87	56.131	Cyprinodon_variegatus
MGP_SPRETEiJ_G0022381	Dxo	100	89.831	ENSDNOG00000038155	DXO	100	87.909	Dasypus_novemcinctus
MGP_SPRETEiJ_G0022381	Dxo	100	89.831	ENSDORG00000011708	Dxo	100	86.935	Dipodomys_ordii
MGP_SPRETEiJ_G0022381	Dxo	99	84.264	ENSETEG00000009525	DXO	100	84.264	Echinops_telfairi
MGP_SPRETEiJ_G0022381	Dxo	100	50.847	ENSEBUG00000003794	DXO	83	52.747	Eptatretus_burgeri
MGP_SPRETEiJ_G0022381	Dxo	100	93.220	ENSEASG00005015528	DXO	100	92.063	Equus_asinus_asinus
MGP_SPRETEiJ_G0022381	Dxo	100	93.220	ENSECAG00000019694	DXO	100	92.063	Equus_caballus
MGP_SPRETEiJ_G0022381	Dxo	100	83.898	ENSEEUG00000005411	DXO	100	84.422	Erinaceus_europaeus
MGP_SPRETEiJ_G0022381	Dxo	100	53.390	ENSELUG00000005464	DXO	82	54.270	Esox_lucius
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSFCAG00000004520	DXO	100	87.657	Felis_catus
MGP_SPRETEiJ_G0022381	Dxo	100	93.220	ENSFDAG00000004264	DXO	98	94.828	Fukomys_damarensis
MGP_SPRETEiJ_G0022381	Dxo	99	53.846	ENSFHEG00000014408	DXO	86	55.738	Fundulus_heteroclitus
MGP_SPRETEiJ_G0022381	Dxo	100	51.695	ENSGMOG00000008886	DXO	89	53.151	Gadus_morhua
MGP_SPRETEiJ_G0022381	Dxo	99	55.556	ENSGAFG00000020264	DXO	88	54.545	Gambusia_affinis
MGP_SPRETEiJ_G0022381	Dxo	99	53.846	ENSGACG00000011578	DXO	91	54.545	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0022381	Dxo	100	91.525	ENSGGOG00000002277	DXO	100	90.657	Gorilla_gorilla
MGP_SPRETEiJ_G0022381	Dxo	100	55.085	ENSHBUG00000012997	DXO	87	53.908	Haplochromis_burtoni
MGP_SPRETEiJ_G0022381	Dxo	100	89.683	ENSHGLG00000016572	DOM3Z	100	89.683	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0022381	Dxo	100	89.683	ENSHGLG00000016585	DOM3Z	100	88.161	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0022381	Dxo	100	89.683	ENSHGLG00100013105	DXO	100	89.683	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0022381	Dxo	100	55.085	ENSHCOG00000018279	DXO	88	54.496	Hippocampus_comes
MGP_SPRETEiJ_G0022381	Dxo	99	51.282	ENSHCOG00000018327	DXO	89	46.961	Hippocampus_comes
MGP_SPRETEiJ_G0022381	Dxo	99	51.282	ENSHCOG00000013410	-	88	45.614	Hippocampus_comes
MGP_SPRETEiJ_G0022381	Dxo	99	55.556	ENSHCOG00000018381	DXO	99	50.000	Hippocampus_comes
MGP_SPRETEiJ_G0022381	Dxo	100	55.085	ENSIPUG00000002976	dxo	87	55.556	Ictalurus_punctatus
MGP_SPRETEiJ_G0022381	Dxo	100	92.373	ENSSTOG00000027075	DXO	100	90.476	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0022381	Dxo	100	90.476	ENSJJAG00000016118	Dxo	100	87.154	Jaculus_jaculus
MGP_SPRETEiJ_G0022381	Dxo	98	54.310	ENSKMAG00000018985	DXO	88	54.301	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0022381	Dxo	99	54.701	ENSLBEG00000025439	DXO	86	53.406	Labrus_bergylta
MGP_SPRETEiJ_G0022381	Dxo	100	55.932	ENSLACG00000011329	DXO	100	55.372	Latimeria_chalumnae
MGP_SPRETEiJ_G0022381	Dxo	100	53.782	ENSLOCG00000008086	DXO	90	54.847	Lepisosteus_oculatus
MGP_SPRETEiJ_G0022381	Dxo	100	93.220	ENSLAFG00000014243	DXO	100	89.924	Loxodonta_africana
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSMFAG00000042173	DXO	100	89.899	Macaca_fascicularis
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSMMUG00000000741	DXO	100	90.152	Macaca_mulatta
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSMNEG00000032201	DXO	100	89.646	Macaca_nemestrina
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSMLEG00000035257	DXO	100	89.899	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0022381	Dxo	100	55.085	ENSMZEG00005003714	DXO	87	53.639	Maylandia_zebra
MGP_SPRETEiJ_G0022381	Dxo	100	93.220	ENSMAUG00000022102	Dxo	100	90.201	Mesocricetus_auratus
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSMICG00000016605	DXO	99	89.646	Microcebus_murinus
MGP_SPRETEiJ_G0022381	Dxo	100	96.032	ENSMOCG00000005928	Dxo	100	96.032	Microtus_ochrogaster
MGP_SPRETEiJ_G0022381	Dxo	99	86.325	ENSMODG00000015027	DXO	83	80.508	Monodelphis_domestica
MGP_SPRETEiJ_G0022381	Dxo	100	100.000	MGP_CAROLIEiJ_G0021476	Dxo	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0022381	Dxo	100	100.000	ENSMUSG00000040482	Dxo	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0022381	Dxo	100	99.153	MGP_PahariEiJ_G0020471	Dxo	100	99.153	Mus_pahari
MGP_SPRETEiJ_G0022381	Dxo	100	89.831	ENSMPUG00000010562	DXO	100	84.131	Mustela_putorius_furo
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSMLUG00000027577	DXO	98	87.927	Myotis_lucifugus
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSNGAG00000021244	Dxo	100	88.889	Nannospalax_galili
MGP_SPRETEiJ_G0022381	Dxo	100	55.085	ENSNBRG00000001675	DXO	87	53.908	Neolamprologus_brichardi
MGP_SPRETEiJ_G0022381	Dxo	100	92.373	ENSNLEG00000006470	DXO	100	90.657	Nomascus_leucogenys
MGP_SPRETEiJ_G0022381	Dxo	100	88.983	ENSMEUG00000006110	DXO	99	80.952	Notamacropus_eugenii
MGP_SPRETEiJ_G0022381	Dxo	100	87.288	ENSODEG00000017552	DXO	100	90.476	Octodon_degus
MGP_SPRETEiJ_G0022381	Dxo	100	54.237	ENSONIG00000017143	DXO	94	53.003	Oreochromis_niloticus
MGP_SPRETEiJ_G0022381	Dxo	100	89.831	ENSOCUG00000007029	DXO	100	89.421	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0022381	Dxo	98	52.586	ENSORLG00000008743	DXO	86	54.348	Oryzias_latipes
MGP_SPRETEiJ_G0022381	Dxo	98	52.586	ENSORLG00020018952	DXO	86	53.951	Oryzias_latipes_hni
MGP_SPRETEiJ_G0022381	Dxo	98	51.724	ENSORLG00015008419	DXO	86	53.804	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0022381	Dxo	98	52.586	ENSOMEG00000011105	DXO	86	54.795	Oryzias_melastigma
MGP_SPRETEiJ_G0022381	Dxo	100	93.220	ENSOGAG00000009590	DXO	99	89.899	Otolemur_garnettii
MGP_SPRETEiJ_G0022381	Dxo	98	92.241	ENSOARG00000002332	DXO	84	90.202	Ovis_aries
MGP_SPRETEiJ_G0022381	Dxo	100	91.525	ENSPPAG00000041236	DXO	100	90.404	Pan_paniscus
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSPPRG00000005199	DXO	100	87.406	Panthera_pardus
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSPTIG00000021529	DXO	100	87.154	Panthera_tigris_altaica
MGP_SPRETEiJ_G0022381	Dxo	100	91.525	ENSPTRG00000052503	-	100	90.657	Pan_troglodytes
MGP_SPRETEiJ_G0022381	Dxo	100	91.525	ENSPTRG00000045498	-	100	90.404	Pan_troglodytes
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSPANG00000017587	DXO	100	89.899	Papio_anubis
MGP_SPRETEiJ_G0022381	Dxo	99	50.427	ENSPMGG00000022188	DXO	85	51.093	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0022381	Dxo	100	94.915	ENSPEMG00000009229	Dxo	99	95.238	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0022381	Dxo	100	55.932	ENSPMAG00000008156	DXO	99	56.338	Petromyzon_marinus
MGP_SPRETEiJ_G0022381	Dxo	100	87.288	ENSPCIG00000018793	DXO	100	80.952	Phascolarctos_cinereus
MGP_SPRETEiJ_G0022381	Dxo	99	53.846	ENSPFOG00000004778	DXO	88	54.278	Poecilia_formosa
MGP_SPRETEiJ_G0022381	Dxo	99	53.846	ENSPLAG00000015246	DXO	88	54.278	Poecilia_latipinna
MGP_SPRETEiJ_G0022381	Dxo	99	53.846	ENSPMEG00000001371	DXO	88	54.278	Poecilia_mexicana
MGP_SPRETEiJ_G0022381	Dxo	100	91.525	ENSPPYG00000016473	DXO	100	90.657	Pongo_abelii
MGP_SPRETEiJ_G0022381	Dxo	100	89.831	ENSPCAG00000004354	DXO	99	88.384	Procavia_capensis
MGP_SPRETEiJ_G0022381	Dxo	100	92.373	ENSPCOG00000016641	DXO	99	90.404	Propithecus_coquereli
MGP_SPRETEiJ_G0022381	Dxo	100	89.831	ENSPVAG00000005137	DXO	100	87.909	Pteropus_vampyrus
MGP_SPRETEiJ_G0022381	Dxo	100	54.237	ENSPNYG00000018482	DXO	87	53.100	Pundamilia_nyererei
MGP_SPRETEiJ_G0022381	Dxo	100	55.085	ENSPNAG00000016499	DXO	88	55.135	Pygocentrus_nattereri
MGP_SPRETEiJ_G0022381	Dxo	100	98.305	ENSRNOG00000000422	Dxo	100	97.229	Rattus_norvegicus
MGP_SPRETEiJ_G0022381	Dxo	100	90.461	ENSRBIG00000044693	DXO	100	89.899	Rhinopithecus_bieti
MGP_SPRETEiJ_G0022381	Dxo	100	90.678	ENSRROG00000035555	DXO	100	90.152	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0022381	Dxo	100	93.220	ENSSBOG00000035395	DXO	100	91.162	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0022381	Dxo	100	85.593	ENSSHAG00000009052	DXO	99	78.934	Sarcophilus_harrisii
MGP_SPRETEiJ_G0022381	Dxo	100	54.237	ENSSFOG00015003736	dxo	88	55.405	Scleropages_formosus
MGP_SPRETEiJ_G0022381	Dxo	100	53.398	ENSSMAG00000015443	DXO	89	52.320	Scophthalmus_maximus
MGP_SPRETEiJ_G0022381	Dxo	99	52.137	ENSSDUG00000009756	DXO	94	52.703	Seriola_dumerili
MGP_SPRETEiJ_G0022381	Dxo	99	52.991	ENSSLDG00000022817	DXO	83	52.778	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0022381	Dxo	67	67.647	ENSSPUG00000012861	DXO	77	63.006	Sphenodon_punctatus
MGP_SPRETEiJ_G0022381	Dxo	97	53.913	ENSSPAG00000009427	DXO	89	51.169	Stegastes_partitus
MGP_SPRETEiJ_G0022381	Dxo	100	89.831	ENSSSCG00000001425	DXO	100	89.169	Sus_scrofa
MGP_SPRETEiJ_G0022381	Dxo	99	52.137	ENSTRUG00000021219	DXO	89	52.316	Takifugu_rubripes
MGP_SPRETEiJ_G0022381	Dxo	91	50.530	ENSTNIG00000000151	-	99	50.000	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0022381	Dxo	96	89.381	ENSTTRG00000005937	DXO	100	77.330	Tursiops_truncatus
MGP_SPRETEiJ_G0022381	Dxo	100	85.855	ENSUAMG00000024335	DXO	100	81.864	Ursus_americanus
MGP_SPRETEiJ_G0022381	Dxo	100	88.983	ENSUMAG00000012641	DXO	100	88.889	Ursus_maritimus
MGP_SPRETEiJ_G0022381	Dxo	81	91.525	ENSVPAG00000000292	-	99	92.386	Vicugna_pacos
MGP_SPRETEiJ_G0022381	Dxo	100	89.831	ENSVVUG00000023270	DXO	100	89.683	Vulpes_vulpes
MGP_SPRETEiJ_G0022381	Dxo	100	55.932	ENSXETG00000027585	dxo	99	53.351	Xenopus_tropicalis
MGP_SPRETEiJ_G0022381	Dxo	99	52.991	ENSXMAG00000001092	DXO	87	53.908	Xiphophorus_maculatus