EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022382 (Gene tree)
Gene ID: -
Gene Symbol: Skiv2l
Alias: 4930534J06Rik|Ski2w
Full Name: superkiller viralicidic activity 2-like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 11054 bases
Position: chr17:32499294-32510347
Accession: 1099835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0046202	rRNA_proc-arch	PF13234.6	5.3e-42	1	1
MGP_SPRETEiJ_P0046206	rRNA_proc-arch	PF13234.6	2.5e-18	1	2
MGP_SPRETEiJ_P0046206	rRNA_proc-arch	PF13234.6	2.5e-18	2	2
MGP_SPRETEiJ_P0046202	DEAD	PF00270.29	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0046209	-	832	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046208	-	813	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046201	-	4000	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046203	-	3877	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046202	-	3947	-	MGP_SPRETEiJ_P0046202	1244 (aa)	-	-
MGP_SPRETEiJ_T0046205	-	462	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046204	-	4335	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046207	-	816	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046206	-	727	-	MGP_SPRETEiJ_P0046206	242 (aa)	-	-
MGP_SPRETEiJ_T0046210	-	881	-	MGP_SPRETEiJ_P0046210	92 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0022382's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022382's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0022382	Skiv2l	76	37.695	MGP_SPRETEiJ_G0019775	Mtrex	88	37.591

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.943	ENSG00000204351	SKIV2L	98	96.067	Homo_sapiens
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.239	ENSAPOG00000008257	skiv2l	99	61.563	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.622	ENSAMEG00000002078	SKIV2L	100	92.622	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0022382	Skiv2l	99	60.064	ENSACIG00000016719	skiv2l	99	60.048	Amphilophus_citrinellus
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.160	ENSAOCG00000017352	skiv2l	99	61.241	Amphiprion_ocellaris
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.080	ENSAPEG00000001055	skiv2l	99	61.160	Amphiprion_percula
MGP_SPRETEiJ_G0022382	Skiv2l	99	60.814	ENSATEG00000007601	skiv2l	99	60.835	Anabas_testudineus
MGP_SPRETEiJ_G0022382	Skiv2l	99	65.882	ENSACAG00000011746	SKIV2L	98	66.056	Anolis_carolinensis
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.264	ENSANAG00000037992	SKIV2L	100	93.264	Aotus_nancymaae
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.447	ENSACLG00000006886	skiv2l	99	61.724	Astatotilapia_calliptera
MGP_SPRETEiJ_G0022382	Skiv2l	98	59.488	ENSAMXG00000011517	skiv2l	99	59.310	Astyanax_mexicanus
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.943	ENSBTAG00000005587	SKIV2L	100	92.943	Bos_taurus
MGP_SPRETEiJ_G0022382	Skiv2l	95	39.484	WBGene00008502	skih-2	99	39.640	Caenorhabditis_elegans
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.943	ENSCJAG00000002263	SKIV2L	100	92.943	Callithrix_jacchus
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.302	ENSCAFG00000000679	SKIV2L	100	92.302	Canis_familiaris
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.221	ENSCAFG00020000948	SKIV2L	100	92.221	Canis_lupus_dingo
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.943	ENSCHIG00000012897	SKIV2L	100	92.943	Capra_hircus
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.542	ENSTSYG00000012133	SKIV2L	100	92.542	Carlito_syrichta
MGP_SPRETEiJ_G0022382	Skiv2l	100	91.881	ENSCPOG00000001307	SKIV2L	100	91.881	Cavia_porcellus
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.103	ENSCCAG00000026206	SKIV2L	100	93.103	Cebus_capucinus
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.023	ENSCATG00000036901	SKIV2L	100	93.023	Cercocebus_atys
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.221	ENSCLAG00000007678	SKIV2L	100	92.221	Chinchilla_lanigera
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.943	ENSCSAG00000008988	SKIV2L	100	92.943	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0022382	Skiv2l	87	64.327	ENSCPBG00000000343	SKIV2L	96	65.611	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0022382	Skiv2l	94	50.888	ENSCING00000005576	-	99	50.803	Ciona_intestinalis
MGP_SPRETEiJ_G0022382	Skiv2l	99	93.178	ENSCANG00000039709	SKIV2L	100	93.178	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0022382	Skiv2l	100	94.936	ENSCGRG00001008385	Skiv2l	100	94.936	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0022382	Skiv2l	99	60.800	ENSCSEG00000011326	skiv2l	98	60.873	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0022382	Skiv2l	99	60.925	ENSCVAG00000003072	skiv2l	99	60.772	Cyprinodon_variegatus
MGP_SPRETEiJ_G0022382	Skiv2l	99	60.252	ENSDARG00000062206	skiv2l	99	60.192	Danio_rerio
MGP_SPRETEiJ_G0022382	Skiv2l	94	92.949	ENSDNOG00000037590	SKIV2L	100	86.789	Dasypus_novemcinctus
MGP_SPRETEiJ_G0022382	Skiv2l	93	44.370	FBgn0039117	tst	97	44.604	Drosophila_melanogaster
MGP_SPRETEiJ_G0022382	Skiv2l	100	75.812	ENSETEG00000009522	SKIV2L	68	92.426	Echinops_telfairi
MGP_SPRETEiJ_G0022382	Skiv2l	89	56.632	ENSEBUG00000013680	-	97	56.437	Eptatretus_burgeri
MGP_SPRETEiJ_G0022382	Skiv2l	93	93.632	ENSEASG00005015534	SKIV2L	99	93.632	Equus_asinus_asinus
MGP_SPRETEiJ_G0022382	Skiv2l	95	92.527	ENSECAG00000021823	SKIV2L	96	93.141	Equus_caballus
MGP_SPRETEiJ_G0022382	Skiv2l	93	73.359	ENSEEUG00000005049	SKIV2L	57	98.024	Erinaceus_europaeus
MGP_SPRETEiJ_G0022382	Skiv2l	99	59.746	ENSELUG00000000181	skiv2l	94	66.010	Esox_lucius
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.783	ENSFCAG00000004519	SKIV2L	100	92.783	Felis_catus
MGP_SPRETEiJ_G0022382	Skiv2l	100	89.655	ENSFDAG00000009438	SKIV2L	100	89.896	Fukomys_damarensis
MGP_SPRETEiJ_G0022382	Skiv2l	99	60.983	ENSFHEG00000008853	skiv2l	99	61.174	Fundulus_heteroclitus
MGP_SPRETEiJ_G0022382	Skiv2l	99	58.978	ENSGMOG00000005926	skiv2l	98	59.058	Gadus_morhua
MGP_SPRETEiJ_G0022382	Skiv2l	100	39.928	ENSGALG00000035499	SKIV2L	98	61.260	Gallus_gallus
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.490	ENSGAFG00000002382	skiv2l	99	61.526	Gambusia_affinis
MGP_SPRETEiJ_G0022382	Skiv2l	99	60.095	ENSGACG00000002927	skiv2l	98	60.533	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.783	ENSGGOG00000002270	SKIV2L	100	92.783	Gorilla_gorilla
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.367	ENSHBUG00000000726	skiv2l	99	61.644	Haplochromis_burtoni
MGP_SPRETEiJ_G0022382	Skiv2l	100	90.633	ENSHGLG00000016596	SKIV2L	100	90.953	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0022382	Skiv2l	100	87.990	ENSHGLG00100014161	SKIV2L	100	88.311	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0022382	Skiv2l	98	59.332	ENSHCOG00000007191	skiv2l	100	59.332	Hippocampus_comes
MGP_SPRETEiJ_G0022382	Skiv2l	99	59.953	ENSIPUG00000016263	skiv2l	100	60.305	Ictalurus_punctatus
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.986	ENSSTOG00000014596	SKIV2L	100	93.986	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0022382	Skiv2l	71	60.192	ENSLACG00000002986	-	73	61.307	Latimeria_chalumnae
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.221	ENSLAFG00000014231	SKIV2L	100	92.221	Loxodonta_africana
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.264	ENSMFAG00000034235	SKIV2L	100	93.264	Macaca_fascicularis
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.184	ENSMMUG00000000736	SKIV2L	100	93.184	Macaca_mulatta
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.184	ENSMNEG00000044474	SKIV2L	100	93.184	Macaca_nemestrina
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.023	ENSMLEG00000030512	SKIV2L	100	93.023	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0022382	Skiv2l	99	60.970	ENSMAMG00000002927	skiv2l	99	60.919	Mastacembelus_armatus
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.288	ENSMZEG00005026415	skiv2l	99	61.563	Maylandia_zebra
MGP_SPRETEiJ_G0022382	Skiv2l	70	51.688	ENSMGAG00000001320	SKIV2L	97	51.688	Meleagris_gallopavo
MGP_SPRETEiJ_G0022382	Skiv2l	100	94.137	ENSMAUG00000018613	Skiv2l	100	94.378	Mesocricetus_auratus
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.504	ENSMICG00000046331	SKIV2L	100	93.504	Microcebus_murinus
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.408	ENSMOCG00000014240	Skiv2l	100	93.408	Microtus_ochrogaster
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.174	ENSMMOG00000014547	skiv2l	98	61.107	Mola_mola
MGP_SPRETEiJ_G0022382	Skiv2l	100	86.560	ENSMODG00000015052	SKIV2L	100	86.560	Monodelphis_domestica
MGP_SPRETEiJ_G0022382	Skiv2l	99	59.564	ENSMALG00000010535	skiv2l	98	59.706	Monopterus_albus
MGP_SPRETEiJ_G0022382	Skiv2l	100	99.174	MGP_CAROLIEiJ_G0021477	Skiv2l	100	99.174	Mus_caroli
MGP_SPRETEiJ_G0022382	Skiv2l	100	99.598	ENSMUSG00000040356	Skiv2l	100	99.598	Mus_musculus
MGP_SPRETEiJ_G0022382	Skiv2l	100	98.151	MGP_PahariEiJ_G0020472	Skiv2l	100	98.151	Mus_pahari
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.382	ENSMPUG00000010567	SKIV2L	100	92.382	Mustela_putorius_furo
MGP_SPRETEiJ_G0022382	Skiv2l	100	90.938	ENSMLUG00000000628	SKIV2L	100	90.938	Myotis_lucifugus
MGP_SPRETEiJ_G0022382	Skiv2l	99	60.751	ENSNBRG00000018650	skiv2l	98	60.905	Neolamprologus_brichardi
MGP_SPRETEiJ_G0022382	Skiv2l	98	90.065	ENSNLEG00000006451	SKIV2L	99	90.147	Nomascus_leucogenys
MGP_SPRETEiJ_G0022382	Skiv2l	78	92.920	ENSMEUG00000006072	SKIV2L	78	92.920	Notamacropus_eugenii
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.943	ENSOPRG00000003972	SKIV2L	100	92.943	Ochotona_princeps
MGP_SPRETEiJ_G0022382	Skiv2l	100	90.938	ENSODEG00000017516	SKIV2L	100	90.938	Octodon_degus
MGP_SPRETEiJ_G0022382	Skiv2l	99	62.080	ENSONIG00000013500	skiv2l	99	62.368	Oreochromis_niloticus
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.745	ENSOCUG00000007019	SKIV2L	100	93.745	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.587	ENSORLG00000002021	skiv2l	99	61.717	Oryzias_latipes
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.508	ENSORLG00020009462	skiv2l	99	61.637	Oryzias_latipes_hni
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.270	ENSORLG00015016750	skiv2l	99	61.396	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0022382	Skiv2l	99	62.302	ENSOMEG00000008531	skiv2l	99	62.016	Oryzias_melastigma
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.103	ENSOGAG00000009578	SKIV2L	100	93.103	Otolemur_garnettii
MGP_SPRETEiJ_G0022382	Skiv2l	74	69.302	ENSOARG00000001720	-	70	84.859	Ovis_aries
MGP_SPRETEiJ_G0022382	Skiv2l	100	87.402	ENSOARG00000002411	-	100	87.402	Ovis_aries
MGP_SPRETEiJ_G0022382	Skiv2l	98	92.065	ENSPPAG00000040211	SKIV2L	99	92.065	Pan_paniscus
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.863	ENSPPRG00000005017	SKIV2L	100	92.863	Panthera_pardus
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.542	ENSPTIG00000021656	SKIV2L	100	92.542	Panthera_tigris_altaica
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.943	ENSPTRG00000017997	SKIV2L	100	92.943	Pan_troglodytes
MGP_SPRETEiJ_G0022382	Skiv2l	98	91.977	ENSPANG00000011501	SKIV2L	99	91.977	Papio_anubis
MGP_SPRETEiJ_G0022382	Skiv2l	99	60.063	ENSPKIG00000011876	skiv2l	94	66.321	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0022382	Skiv2l	99	59.662	ENSPMGG00000019707	skiv2l	98	60.537	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0022382	Skiv2l	100	95.096	ENSPEMG00000019001	Skiv2l	100	95.096	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0022382	Skiv2l	100	86.491	ENSPCIG00000018792	SKIV2L	100	86.491	Phascolarctos_cinereus
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.618	ENSPFOG00000002424	skiv2l	99	61.656	Poecilia_formosa
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.746	ENSPLAG00000018304	skiv2l	99	61.786	Poecilia_latipinna
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.538	ENSPMEG00000006997	skiv2l	99	61.576	Poecilia_mexicana
MGP_SPRETEiJ_G0022382	Skiv2l	99	60.048	ENSPREG00000002277	skiv2l	96	66.218	Poecilia_reticulata
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.462	ENSPPYG00000016472	SKIV2L	100	92.462	Pongo_abelii
MGP_SPRETEiJ_G0022382	Skiv2l	100	75.451	ENSPCAG00000004178	SKIV2L	77	92.683	Procavia_capensis
MGP_SPRETEiJ_G0022382	Skiv2l	100	94.226	ENSPCOG00000010308	SKIV2L	100	94.226	Propithecus_coquereli
MGP_SPRETEiJ_G0022382	Skiv2l	100	91.099	ENSPVAG00000005136	SKIV2L	100	91.099	Pteropus_vampyrus
MGP_SPRETEiJ_G0022382	Skiv2l	99	59.533	ENSPNYG00000017853	skiv2l	97	66.460	Pundamilia_nyererei
MGP_SPRETEiJ_G0022382	Skiv2l	98	60.817	ENSPNAG00000011823	skiv2l	99	61.075	Pygocentrus_nattereri
MGP_SPRETEiJ_G0022382	Skiv2l	100	97.990	ENSRNOG00000000421	Skiv2l	100	97.990	Rattus_norvegicus
MGP_SPRETEiJ_G0022382	Skiv2l	98	90.453	ENSRBIG00000035485	SKIV2L	99	90.453	Rhinopithecus_bieti
MGP_SPRETEiJ_G0022382	Skiv2l	100	92.943	ENSRROG00000036429	SKIV2L	100	92.943	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0022382	Skiv2l	93	38.559	YLR398C	-	95	38.321	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.344	ENSSBOG00000027920	SKIV2L	100	93.344	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0022382	Skiv2l	100	86.160	ENSSHAG00000008963	SKIV2L	100	85.120	Sarcophilus_harrisii
MGP_SPRETEiJ_G0022382	Skiv2l	99	60.914	ENSSFOG00015016930	skiv2l	99	61.022	Scleropages_formosus
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.040	ENSSMAG00000020185	skiv2l	99	61.013	Scophthalmus_maximus
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.301	ENSSDUG00000019977	skiv2l	99	61.223	Seriola_dumerili
MGP_SPRETEiJ_G0022382	Skiv2l	99	59.759	ENSSLDG00000024382	skiv2l	98	60.016	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0022382	Skiv2l	99	62.393	ENSSPUG00000012945	SKIV2L	98	62.618	Sphenodon_punctatus
MGP_SPRETEiJ_G0022382	Skiv2l	94	60.990	ENSSPAG00000012904	skiv2l	98	60.833	Stegastes_partitus
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.665	ENSSSCG00000001424	SKIV2L	100	93.665	Sus_scrofa
MGP_SPRETEiJ_G0022382	Skiv2l	69	66.127	ENSTRUG00000000966	skiv2l	100	55.288	Takifugu_rubripes
MGP_SPRETEiJ_G0022382	Skiv2l	99	59.729	ENSTNIG00000004382	skiv2l	98	59.984	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0022382	Skiv2l	94	92.402	ENSTBEG00000003462	SKIV2L	94	92.402	Tupaia_belangeri
MGP_SPRETEiJ_G0022382	Skiv2l	100	87.249	ENSTTRG00000005931	SKIV2L	100	87.249	Tursiops_truncatus
MGP_SPRETEiJ_G0022382	Skiv2l	100	93.023	ENSUAMG00000024336	SKIV2L	100	93.023	Ursus_americanus
MGP_SPRETEiJ_G0022382	Skiv2l	93	93.287	ENSUMAG00000012666	SKIV2L	99	93.287	Ursus_maritimus
MGP_SPRETEiJ_G0022382	Skiv2l	98	92.590	ENSVVUG00000022807	SKIV2L	98	92.590	Vulpes_vulpes
MGP_SPRETEiJ_G0022382	Skiv2l	100	58.300	ENSXETG00000010932	skiv2l	100	58.333	Xenopus_tropicalis
MGP_SPRETEiJ_G0022382	Skiv2l	99	61.495	ENSXCOG00000019517	skiv2l	96	61.576	Xiphophorus_couchianus
MGP_SPRETEiJ_G0022382	Skiv2l	99	60.904	ENSXMAG00000014079	skiv2l	99	60.932	Xiphophorus_maculatus