EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022436 (Gene tree)
Gene ID: -
Gene Symbol: Vars2
Alias: 1190004I24Rik|Vars2l
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 11329 bases
Position: chr17:33510074-33521402
Accession: 1916165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0046431	tRNA-synt_1g	PF09334.11	6.7e-15	1	1
MGP_SPRETEiJ_P0046431	Anticodon_1	PF08264.13	2.2e-30	1	1
MGP_SPRETEiJ_P0046431	tRNA-synt_1	PF00133.22	7.4e-181	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0046442	-	716	-	MGP_SPRETEiJ_P0046442	75 (aa)	-	UPI0001F78C44
MGP_SPRETEiJ_T0046441	-	784	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046440	-	618	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046432	-	3801	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046433	-	2506	-	MGP_SPRETEiJ_P0046433	579 (aa)	-	-
MGP_SPRETEiJ_T0046431	-	4423	-	MGP_SPRETEiJ_P0046431	1060 (aa)	-	-
MGP_SPRETEiJ_T0046436	-	603	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046437	-	319	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046434	-	1972	-	MGP_SPRETEiJ_P0046434	214 (aa)	-	-
MGP_SPRETEiJ_T0046435	-	722	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046438	-	832	-	MGP_SPRETEiJ_P0046438	112 (aa)	-	-
MGP_SPRETEiJ_T0046439	-	708	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0022436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0022436	Vars2	93	52.661	MGP_SPRETEiJ_G0022396	Vars	82	50.288

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022436	Vars2	88	64.286	ENSAPOG00000007396	vars2	97	51.558	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0022436	Vars2	100	81.921	ENSAMEG00000012997	VARS2	97	81.921	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0022436	Vars2	97	55.009	ENSACIG00000004344	vars2	99	51.364	Amphilophus_citrinellus
MGP_SPRETEiJ_G0022436	Vars2	97	54.811	ENSAOCG00000000476	vars2	97	50.942	Amphiprion_ocellaris
MGP_SPRETEiJ_G0022436	Vars2	97	54.639	ENSAPEG00000008646	vars2	95	50.942	Amphiprion_percula
MGP_SPRETEiJ_G0022436	Vars2	97	55.517	ENSATEG00000012291	vars2	97	51.727	Anabas_testudineus
MGP_SPRETEiJ_G0022436	Vars2	97	59.896	ENSACAG00000022093	VARS2	98	57.743	Anolis_carolinensis
MGP_SPRETEiJ_G0022436	Vars2	99	82.892	ENSANAG00000038018	VARS2	99	82.892	Aotus_nancymaae
MGP_SPRETEiJ_G0022436	Vars2	97	53.541	ENSACLG00000018673	vars2	99	51.024	Astatotilapia_calliptera
MGP_SPRETEiJ_G0022436	Vars2	93	57.942	ENSAMXG00000017773	vars2	98	51.763	Astyanax_mexicanus
MGP_SPRETEiJ_G0022436	Vars2	99	84.550	ENSBTAG00000010698	VARS2	99	84.499	Bos_taurus
MGP_SPRETEiJ_G0022436	Vars2	100	83.051	ENSCJAG00000019826	VARS2	99	83.051	Callithrix_jacchus
MGP_SPRETEiJ_G0022436	Vars2	100	81.168	ENSCAFG00000000454	VARS2	100	81.168	Canis_familiaris
MGP_SPRETEiJ_G0022436	Vars2	94	83.978	ENSCAFG00020019387	VARS2	95	83.208	Canis_lupus_dingo
MGP_SPRETEiJ_G0022436	Vars2	99	84.440	ENSCHIG00000007847	VARS2	99	84.310	Capra_hircus
MGP_SPRETEiJ_G0022436	Vars2	99	83.758	ENSTSYG00000009904	VARS2	99	83.758	Carlito_syrichta
MGP_SPRETEiJ_G0022436	Vars2	91	86.275	ENSCAPG00000017770	VARS2	99	82.239	Cavia_aperea
MGP_SPRETEiJ_G0022436	Vars2	99	81.887	ENSCPOG00000021834	VARS2	99	81.887	Cavia_porcellus
MGP_SPRETEiJ_G0022436	Vars2	99	83.679	ENSCCAG00000037907	VARS2	99	83.679	Cebus_capucinus
MGP_SPRETEiJ_G0022436	Vars2	99	84.026	ENSCATG00000032554	VARS2	99	84.026	Cercocebus_atys
MGP_SPRETEiJ_G0022436	Vars2	99	81.168	ENSCLAG00000002889	VARS2	99	81.168	Chinchilla_lanigera
MGP_SPRETEiJ_G0022436	Vars2	99	83.837	ENSCSAG00000008327	VARS2	99	83.837	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0022436	Vars2	97	62.787	ENSCPBG00000021502	VARS2	95	62.357	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0022436	Vars2	99	83.932	ENSCANG00000014991	VARS2	99	83.932	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0022436	Vars2	99	90.353	ENSCGRG00001021535	Vars2	100	90.189	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0022436	Vars2	99	90.353	ENSCGRG00000014112	Vars2	100	90.189	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0022436	Vars2	81	57.447	ENSCSEG00000015432	vars2	89	57.447	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0022436	Vars2	94	56.137	ENSCVAG00000017765	vars2	94	53.461	Cyprinodon_variegatus
MGP_SPRETEiJ_G0022436	Vars2	88	66.327	ENSDARG00000056717	vars2	97	52.015	Danio_rerio
MGP_SPRETEiJ_G0022436	Vars2	93	86.213	ENSDORG00000008516	Vars2	93	84.423	Dipodomys_ordii
MGP_SPRETEiJ_G0022436	Vars2	99	72.633	ENSETEG00000014844	VARS2	99	72.633	Echinops_telfairi
MGP_SPRETEiJ_G0022436	Vars2	84	59.574	ENSEBUG00000010396	-	93	57.958	Eptatretus_burgeri
MGP_SPRETEiJ_G0022436	Vars2	99	83.883	ENSEASG00005019997	VARS2	97	83.883	Equus_asinus_asinus
MGP_SPRETEiJ_G0022436	Vars2	99	85.108	ENSECAG00000018202	VARS2	99	85.108	Equus_caballus
MGP_SPRETEiJ_G0022436	Vars2	67	80.392	ENSEEUG00000012591	-	63	80.392	Erinaceus_europaeus
MGP_SPRETEiJ_G0022436	Vars2	93	55.654	ENSELUG00000017824	vars2	97	51.880	Esox_lucius
MGP_SPRETEiJ_G0022436	Vars2	100	82.863	ENSFCAG00000010531	VARS2	100	82.863	Felis_catus
MGP_SPRETEiJ_G0022436	Vars2	99	82.298	ENSFDAG00000017216	VARS2	99	82.298	Fukomys_damarensis
MGP_SPRETEiJ_G0022436	Vars2	97	50.709	ENSFHEG00000013932	vars2	93	51.148	Fundulus_heteroclitus
MGP_SPRETEiJ_G0022436	Vars2	97	55.654	ENSGMOG00000018960	vars2	99	55.731	Gadus_morhua
MGP_SPRETEiJ_G0022436	Vars2	97	54.231	ENSGAFG00000004737	vars2	89	50.692	Gambusia_affinis
MGP_SPRETEiJ_G0022436	Vars2	97	56.383	ENSGACG00000001464	vars2	99	53.706	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0022436	Vars2	97	63.251	ENSGAGG00000011652	VARS2	99	60.870	Gopherus_agassizii
MGP_SPRETEiJ_G0022436	Vars2	99	83.837	ENSGGOG00000014587	VARS2	99	83.837	Gorilla_gorilla
MGP_SPRETEiJ_G0022436	Vars2	97	53.114	ENSHBUG00000002448	vars2	100	48.926	Haplochromis_burtoni
MGP_SPRETEiJ_G0022436	Vars2	99	81.450	ENSHGLG00000012886	VARS2	96	81.450	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0022436	Vars2	99	81.262	ENSHGLG00100016535	VARS2	99	81.262	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0022436	Vars2	97	55.226	ENSHCOG00000017907	vars2	94	52.327	Hippocampus_comes
MGP_SPRETEiJ_G0022436	Vars2	93	58.577	ENSIPUG00000015573	Vars2	98	52.676	Ictalurus_punctatus
MGP_SPRETEiJ_G0022436	Vars2	99	85.755	ENSSTOG00000009924	VARS2	99	85.755	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0022436	Vars2	99	83.192	ENSJJAG00000011144	Vars2	99	83.192	Jaculus_jaculus
MGP_SPRETEiJ_G0022436	Vars2	97	53.767	ENSKMAG00000001393	vars2	98	50.702	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0022436	Vars2	83	65.591	ENSLBEG00000005480	-	81	62.681	Labrus_bergylta
MGP_SPRETEiJ_G0022436	Vars2	93	56.137	ENSLBEG00000011949	vars2	97	50.567	Labrus_bergylta
MGP_SPRETEiJ_G0022436	Vars2	97	59.331	ENSLACG00000001576	-	99	52.081	Latimeria_chalumnae
MGP_SPRETEiJ_G0022436	Vars2	99	82.576	ENSLAFG00000015183	VARS2	99	82.576	Loxodonta_africana
MGP_SPRETEiJ_G0022436	Vars2	99	83.837	ENSMFAG00000042367	VARS2	99	83.837	Macaca_fascicularis
MGP_SPRETEiJ_G0022436	Vars2	99	83.837	ENSMMUG00000018609	VARS2	99	83.837	Macaca_mulatta
MGP_SPRETEiJ_G0022436	Vars2	99	83.837	ENSMNEG00000043163	VARS2	99	83.837	Macaca_nemestrina
MGP_SPRETEiJ_G0022436	Vars2	99	84.121	ENSMLEG00000041728	VARS2	97	84.121	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0022436	Vars2	97	53.368	ENSMAMG00000020339	vars2	96	50.909	Mastacembelus_armatus
MGP_SPRETEiJ_G0022436	Vars2	97	53.368	ENSMZEG00005017669	vars2	99	50.931	Maylandia_zebra
MGP_SPRETEiJ_G0022436	Vars2	64	60.000	ENSMGAG00000008005	-	100	57.177	Meleagris_gallopavo
MGP_SPRETEiJ_G0022436	Vars2	100	90.198	ENSMAUG00000018946	Vars2	100	90.198	Mesocricetus_auratus
MGP_SPRETEiJ_G0022436	Vars2	93	85.930	ENSMICG00000005365	VARS2	100	86.099	Microcebus_murinus
MGP_SPRETEiJ_G0022436	Vars2	94	92.848	ENSMOCG00000014607	Vars2	100	92.848	Microtus_ochrogaster
MGP_SPRETEiJ_G0022436	Vars2	97	56.042	ENSMMOG00000012122	vars2	98	50.945	Mola_mola
MGP_SPRETEiJ_G0022436	Vars2	99	74.081	ENSMODG00000015848	VARS2	99	74.081	Monodelphis_domestica
MGP_SPRETEiJ_G0022436	Vars2	97	55.867	ENSMALG00000009217	vars2	99	53.426	Monopterus_albus
MGP_SPRETEiJ_G0022436	Vars2	100	100.000	MGP_CAROLIEiJ_G0021529	Vars2	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0022436	Vars2	100	98.491	ENSMUSG00000038838	Vars2	100	98.491	Mus_musculus
MGP_SPRETEiJ_G0022436	Vars2	100	98.214	MGP_PahariEiJ_G0020523	Vars2	100	98.214	Mus_pahari
MGP_SPRETEiJ_G0022436	Vars2	100	82.015	ENSMPUG00000011643	VARS2	100	82.015	Mustela_putorius_furo
MGP_SPRETEiJ_G0022436	Vars2	99	80.672	ENSMLUG00000002356	VARS2	97	80.672	Myotis_lucifugus
MGP_SPRETEiJ_G0022436	Vars2	90	94.059	ENSNGAG00000020607	Vars2	100	78.853	Nannospalax_galili
MGP_SPRETEiJ_G0022436	Vars2	60	48.209	ENSNBRG00000001624	vars2	57	48.209	Neolamprologus_brichardi
MGP_SPRETEiJ_G0022436	Vars2	99	80.529	ENSNLEG00000005625	VARS2	97	80.529	Nomascus_leucogenys
MGP_SPRETEiJ_G0022436	Vars2	77	75.362	ENSMEUG00000014475	VARS2	89	73.957	Notamacropus_eugenii
MGP_SPRETEiJ_G0022436	Vars2	85	87.368	ENSOPRG00000000682	VARS2	90	82.301	Ochotona_princeps
MGP_SPRETEiJ_G0022436	Vars2	99	80.414	ENSODEG00000017965	VARS2	99	80.414	Octodon_degus
MGP_SPRETEiJ_G0022436	Vars2	67	56.264	ENSONIG00000004734	vars2	72	58.924	Oreochromis_niloticus
MGP_SPRETEiJ_G0022436	Vars2	93	74.747	ENSOANG00000000398	-	98	85.294	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0022436	Vars2	93	83.920	ENSOCUG00000021496	VARS2	64	77.572	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0022436	Vars2	97	54.750	ENSORLG00000010632	vars2	97	51.034	Oryzias_latipes
MGP_SPRETEiJ_G0022436	Vars2	97	54.750	ENSORLG00020018584	vars2	96	51.338	Oryzias_latipes_hni
MGP_SPRETEiJ_G0022436	Vars2	97	54.577	ENSORLG00015010408	vars2	96	51.046	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0022436	Vars2	97	55.095	ENSOMEG00000008360	vars2	97	51.799	Oryzias_melastigma
MGP_SPRETEiJ_G0022436	Vars2	99	83.868	ENSOGAG00000006087	VARS2	97	83.868	Otolemur_garnettii
MGP_SPRETEiJ_G0022436	Vars2	99	83.412	ENSOARG00000010844	VARS2	98	83.286	Ovis_aries
MGP_SPRETEiJ_G0022436	Vars2	99	83.743	ENSPPAG00000041141	VARS2	99	83.743	Pan_paniscus
MGP_SPRETEiJ_G0022436	Vars2	100	82.298	ENSPPRG00000006751	VARS2	97	82.298	Panthera_pardus
MGP_SPRETEiJ_G0022436	Vars2	100	82.203	ENSPTIG00000017799	VARS2	98	83.400	Panthera_tigris_altaica
MGP_SPRETEiJ_G0022436	Vars2	99	83.743	ENSPTRG00000034497	VARS2	99	83.743	Pan_troglodytes
MGP_SPRETEiJ_G0022436	Vars2	99	84.026	ENSPANG00000018481	VARS2	100	84.221	Papio_anubis
MGP_SPRETEiJ_G0022436	Vars2	98	57.517	ENSPKIG00000011372	vars2	98	53.693	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0022436	Vars2	93	61.353	ENSPSIG00000006206	VARS2	92	65.438	Pelodiscus_sinensis
MGP_SPRETEiJ_G0022436	Vars2	88	65.306	ENSPMGG00000000465	vars2	98	52.358	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0022436	Vars2	100	92.358	ENSPEMG00000014691	Vars2	100	92.358	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0022436	Vars2	99	75.614	ENSPCIG00000015040	VARS2	99	75.614	Phascolarctos_cinereus
MGP_SPRETEiJ_G0022436	Vars2	97	55.052	ENSPFOG00000017616	vars2	95	51.848	Poecilia_formosa
MGP_SPRETEiJ_G0022436	Vars2	97	54.246	ENSPLAG00000019778	vars2	99	50.093	Poecilia_latipinna
MGP_SPRETEiJ_G0022436	Vars2	97	54.419	ENSPMEG00000011123	vars2	97	50.999	Poecilia_mexicana
MGP_SPRETEiJ_G0022436	Vars2	96	54.211	ENSPREG00000014998	vars2	96	46.784	Poecilia_reticulata
MGP_SPRETEiJ_G0022436	Vars2	99	83.853	ENSPPYG00000016424	VARS2	99	83.853	Pongo_abelii
MGP_SPRETEiJ_G0022436	Vars2	93	72.362	ENSPCAG00000006946	VARS2	84	77.600	Procavia_capensis
MGP_SPRETEiJ_G0022436	Vars2	99	83.224	ENSPCOG00000014839	VARS2	97	83.224	Propithecus_coquereli
MGP_SPRETEiJ_G0022436	Vars2	99	81.947	ENSPVAG00000004197	VARS2	99	81.947	Pteropus_vampyrus
MGP_SPRETEiJ_G0022436	Vars2	82	59.140	ENSPNYG00000010314	vars2	100	59.140	Pundamilia_nyererei
MGP_SPRETEiJ_G0022436	Vars2	93	58.228	ENSPNAG00000026793	vars2	96	53.531	Pygocentrus_nattereri
MGP_SPRETEiJ_G0022436	Vars2	100	94.340	ENSRNOG00000000833	Vars2	100	94.340	Rattus_norvegicus
MGP_SPRETEiJ_G0022436	Vars2	99	83.743	ENSRBIG00000032725	VARS2	99	83.743	Rhinopithecus_bieti
MGP_SPRETEiJ_G0022436	Vars2	99	83.743	ENSRROG00000043847	VARS2	99	83.743	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0022436	Vars2	99	81.331	ENSSBOG00000033240	VARS2	97	81.331	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0022436	Vars2	99	74.764	ENSSHAG00000009307	VARS2	100	74.764	Sarcophilus_harrisii
MGP_SPRETEiJ_G0022436	Vars2	94	58.123	ENSSFOG00015016187	vars2	98	52.332	Scleropages_formosus
MGP_SPRETEiJ_G0022436	Vars2	93	57.038	ENSSMAG00000020842	vars2	97	52.431	Scophthalmus_maximus
MGP_SPRETEiJ_G0022436	Vars2	97	55.363	ENSSDUG00000011598	vars2	97	52.145	Seriola_dumerili
MGP_SPRETEiJ_G0022436	Vars2	97	55.752	ENSSLDG00000015492	vars2	97	51.052	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0022436	Vars2	57	86.131	ENSSARG00000003786	-	69	86.131	Sorex_araneus
MGP_SPRETEiJ_G0022436	Vars2	97	60.320	ENSSPUG00000014700	VARS2	94	59.168	Sphenodon_punctatus
MGP_SPRETEiJ_G0022436	Vars2	97	52.641	ENSSPAG00000004654	vars2	98	49.148	Stegastes_partitus
MGP_SPRETEiJ_G0022436	Vars2	100	83.898	ENSSSCG00000001384	VARS2	100	83.898	Sus_scrofa
MGP_SPRETEiJ_G0022436	Vars2	97	56.591	ENSTRUG00000005264	vars2	94	53.360	Takifugu_rubripes
MGP_SPRETEiJ_G0022436	Vars2	93	57.143	ENSTNIG00000005916	vars2	95	52.182	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0022436	Vars2	52	86.567	ENSTBEG00000007976	-	52	86.567	Tupaia_belangeri
MGP_SPRETEiJ_G0022436	Vars2	99	72.212	ENSTTRG00000012243	VARS2	99	72.212	Tursiops_truncatus
MGP_SPRETEiJ_G0022436	Vars2	100	82.314	ENSUAMG00000026124	VARS2	100	83.731	Ursus_americanus
MGP_SPRETEiJ_G0022436	Vars2	100	82.863	ENSUMAG00000019894	VARS2	100	82.863	Ursus_maritimus
MGP_SPRETEiJ_G0022436	Vars2	70	84.615	ENSVPAG00000003703	-	64	89.655	Vicugna_pacos
MGP_SPRETEiJ_G0022436	Vars2	100	81.544	ENSVVUG00000010754	VARS2	95	81.544	Vulpes_vulpes
MGP_SPRETEiJ_G0022436	Vars2	89	63.000	ENSXETG00000003036	vars2	99	55.089	Xenopus_tropicalis
MGP_SPRETEiJ_G0022436	Vars2	97	55.634	ENSXCOG00000003455	vars2	96	52.480	Xiphophorus_couchianus
MGP_SPRETEiJ_G0022436	Vars2	97	54.404	ENSXMAG00000013523	vars2	97	51.187	Xiphophorus_maculatus