EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022448 (Gene tree)
Gene ID: -
Gene Symbol: Mrps18b
Alias: 2400002C15Rik
Full Name: mitochondrial ribosomal protein S18B
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 7150 bases
Position: chr17:33788257-33795406
Accession: 1914223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0046525	Ribosomal_S18	PF01084.20	2.7e-16	1	1
MGP_SPRETEiJ_P0046527	Ribosomal_S18	PF01084.20	6.9e-14	1	1
MGP_SPRETEiJ_P0046526	Ribosomal_S18	PF01084.20	9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0046532	-	436	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046531	-	877	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046530	-	346	-	MGP_SPRETEiJ_P0046530	105 (aa)	-	-
MGP_SPRETEiJ_T0046528	-	832	-	MGP_SPRETEiJ_P0046528	188 (aa)	-	-
MGP_SPRETEiJ_T0046529	-	743	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0046525	-	748	-	MGP_SPRETEiJ_P0046525	187 (aa)	-	-
MGP_SPRETEiJ_T0046526	-	787	-	MGP_SPRETEiJ_P0046526	162 (aa)	-	-
MGP_SPRETEiJ_T0046527	-	1063	-	MGP_SPRETEiJ_P0046527	254 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0022448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022448's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022448	Mrps18b	100	77.043	ENSG00000204568	MRPS18B	99	77.043	Homo_sapiens
MGP_SPRETEiJ_G0022448	Mrps18b	72	57.463	ENSAPOG00000003719	mrps18b	71	50.575	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0022448	Mrps18b	100	78.210	ENSAMEG00000013279	MRPS18B	99	78.210	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0022448	Mrps18b	98	45.146	ENSACIG00000013156	mrps18b	99	43.673	Amphilophus_citrinellus
MGP_SPRETEiJ_G0022448	Mrps18b	72	58.209	ENSAOCG00000008569	mrps18b	71	51.149	Amphiprion_ocellaris
MGP_SPRETEiJ_G0022448	Mrps18b	72	58.209	ENSAPEG00000008204	mrps18b	71	51.149	Amphiprion_percula
MGP_SPRETEiJ_G0022448	Mrps18b	79	52.027	ENSATEG00000012949	mrps18b	74	48.634	Anabas_testudineus
MGP_SPRETEiJ_G0022448	Mrps18b	86	55.689	ENSACAG00000010755	MRPS18B	99	54.976	Anolis_carolinensis
MGP_SPRETEiJ_G0022448	Mrps18b	94	79.079	ENSANAG00000021210	MRPS18B	99	76.654	Aotus_nancymaae
MGP_SPRETEiJ_G0022448	Mrps18b	94	50.568	ENSACLG00000015409	mrps18b	85	46.759	Astatotilapia_calliptera
MGP_SPRETEiJ_G0022448	Mrps18b	58	52.778	ENSACLG00000004576	-	73	45.333	Astatotilapia_calliptera
MGP_SPRETEiJ_G0022448	Mrps18b	76	54.225	ENSAMXG00000034123	mrps18b	76	49.462	Astyanax_mexicanus
MGP_SPRETEiJ_G0022448	Mrps18b	100	77.821	ENSBTAG00000006936	MRPS18B	99	77.821	Bos_taurus
MGP_SPRETEiJ_G0022448	Mrps18b	100	75.097	ENSCJAG00000019949	MRPS18B	99	75.097	Callithrix_jacchus
MGP_SPRETEiJ_G0022448	Mrps18b	98	79.459	ENSCAFG00000000411	MRPS18B	99	77.734	Canis_familiaris
MGP_SPRETEiJ_G0022448	Mrps18b	98	79.459	ENSCAFG00020017573	MRPS18B	99	77.734	Canis_lupus_dingo
MGP_SPRETEiJ_G0022448	Mrps18b	100	77.821	ENSCHIG00000021770	MRPS18B	99	77.821	Capra_hircus
MGP_SPRETEiJ_G0022448	Mrps18b	98	77.838	ENSTSYG00000003333	MRPS18B	99	77.778	Carlito_syrichta
MGP_SPRETEiJ_G0022448	Mrps18b	98	77.297	ENSCAPG00000000098	MRPS18B	90	79.039	Cavia_aperea
MGP_SPRETEiJ_G0022448	Mrps18b	98	77.297	ENSCPOG00000015405	MRPS18B	88	79.039	Cavia_porcellus
MGP_SPRETEiJ_G0022448	Mrps18b	100	77.043	ENSCCAG00000037423	MRPS18B	99	77.043	Cebus_capucinus
MGP_SPRETEiJ_G0022448	Mrps18b	100	76.265	ENSCATG00000040250	MRPS18B	99	76.265	Cercocebus_atys
MGP_SPRETEiJ_G0022448	Mrps18b	98	80.541	ENSCLAG00000003282	MRPS18B	95	76.096	Chinchilla_lanigera
MGP_SPRETEiJ_G0022448	Mrps18b	100	76.265	ENSCSAG00000018793	-	99	76.265	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0022448	Mrps18b	100	74.219	ENSCHOG00000005581	MRPS18B	99	74.219	Choloepus_hoffmanni
MGP_SPRETEiJ_G0022448	Mrps18b	73	64.234	ENSCPBG00000018833	MRPS18B	73	62.431	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0022448	Mrps18b	100	76.265	ENSCANG00000043568	MRPS18B	99	76.265	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0022448	Mrps18b	100	85.882	ENSCGRG00001018086	Mrps18b	100	84.706	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0022448	Mrps18b	100	85.882	ENSCGRG00000013676	Mrps18b	100	84.706	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0022448	Mrps18b	84	48.734	ENSCSEG00000018717	mrps18b	81	45.960	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0022448	Mrps18b	72	57.037	ENSCVAG00000004836	mrps18b	69	52.299	Cyprinodon_variegatus
MGP_SPRETEiJ_G0022448	Mrps18b	95	45.506	ENSDARG00000007065	mrps18b	91	45.455	Danio_rerio
MGP_SPRETEiJ_G0022448	Mrps18b	98	74.595	ENSDNOG00000032393	MRPS18B	86	75.546	Dasypus_novemcinctus
MGP_SPRETEiJ_G0022448	Mrps18b	80	43.949	FBgn0032849	mRpS18B	75	43.949	Drosophila_melanogaster
MGP_SPRETEiJ_G0022448	Mrps18b	100	66.926	ENSETEG00000003113	MRPS18B	99	65.625	Echinops_telfairi
MGP_SPRETEiJ_G0022448	Mrps18b	91	44.633	ENSEBUG00000003724	mrps18b	81	42.009	Eptatretus_burgeri
MGP_SPRETEiJ_G0022448	Mrps18b	100	78.988	ENSEASG00005018922	MRPS18B	99	78.988	Equus_asinus_asinus
MGP_SPRETEiJ_G0022448	Mrps18b	100	78.210	ENSECAG00000022485	MRPS18B	99	78.210	Equus_caballus
MGP_SPRETEiJ_G0022448	Mrps18b	98	74.595	ENSEEUG00000010352	MRPS18B	99	72.656	Erinaceus_europaeus
MGP_SPRETEiJ_G0022448	Mrps18b	83	50.323	ENSELUG00000023727	mrps18b	78	47.938	Esox_lucius
MGP_SPRETEiJ_G0022448	Mrps18b	94	79.498	ENSFCAG00000007686	MRPS18B	99	76.654	Felis_catus
MGP_SPRETEiJ_G0022448	Mrps18b	98	76.757	ENSFDAG00000012231	MRPS18B	94	77.729	Fukomys_damarensis
MGP_SPRETEiJ_G0022448	Mrps18b	72	57.463	ENSFHEG00000017861	mrps18b	70	51.724	Fundulus_heteroclitus
MGP_SPRETEiJ_G0022448	Mrps18b	82	53.896	ENSGMOG00000013271	mrps18b	100	50.259	Gadus_morhua
MGP_SPRETEiJ_G0022448	Mrps18b	59	63.964	ENSGAFG00000009051	mrps18b	52	63.964	Gambusia_affinis
MGP_SPRETEiJ_G0022448	Mrps18b	98	47.000	ENSGACG00000001379	mrps18b	98	46.025	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0022448	Mrps18b	85	40.972	ENSGAGG00000022741	-	65	41.538	Gopherus_agassizii
MGP_SPRETEiJ_G0022448	Mrps18b	100	69.261	ENSGGOG00000011317	MRPS18B	99	69.261	Gorilla_gorilla
MGP_SPRETEiJ_G0022448	Mrps18b	67	49.254	ENSHBUG00000010723	-	62	49.254	Haplochromis_burtoni
MGP_SPRETEiJ_G0022448	Mrps18b	94	50.568	ENSHBUG00000008445	mrps18b	85	46.759	Haplochromis_burtoni
MGP_SPRETEiJ_G0022448	Mrps18b	98	77.297	ENSHGLG00000019371	MRPS18B	99	76.000	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0022448	Mrps18b	98	77.297	ENSHGLG00100010530	MRPS18B	96	76.000	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0022448	Mrps18b	85	53.086	ENSHCOG00000007012	mrps18b	81	50.500	Hippocampus_comes
MGP_SPRETEiJ_G0022448	Mrps18b	72	59.259	ENSIPUG00000013958	mrps18b	70	55.556	Ictalurus_punctatus
MGP_SPRETEiJ_G0022448	Mrps18b	88	81.778	ENSSTOG00000011853	MRPS18B	99	80.435	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0022448	Mrps18b	98	81.522	ENSJJAG00000003794	Mrps18b	99	79.216	Jaculus_jaculus
MGP_SPRETEiJ_G0022448	Mrps18b	83	50.955	ENSKMAG00000003449	mrps18b	74	47.716	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0022448	Mrps18b	73	48.201	ENSLBEG00000012943	mrps18b	73	45.810	Labrus_bergylta
MGP_SPRETEiJ_G0022448	Mrps18b	87	59.877	ENSLACG00000004722	MRPS18B	83	56.863	Latimeria_chalumnae
MGP_SPRETEiJ_G0022448	Mrps18b	98	78.495	ENSLAFG00000017285	MRPS18B	100	76.357	Loxodonta_africana
MGP_SPRETEiJ_G0022448	Mrps18b	100	76.265	ENSMFAG00000003966	MRPS18B	99	76.265	Macaca_fascicularis
MGP_SPRETEiJ_G0022448	Mrps18b	100	76.265	ENSMMUG00000006525	MRPS18B	99	76.265	Macaca_mulatta
MGP_SPRETEiJ_G0022448	Mrps18b	100	75.875	ENSMNEG00000045059	MRPS18B	99	75.875	Macaca_nemestrina
MGP_SPRETEiJ_G0022448	Mrps18b	100	70.817	ENSMLEG00000033833	MRPS18B	99	70.817	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0022448	Mrps18b	81	51.656	ENSMAMG00000020243	mrps18b	83	48.744	Mastacembelus_armatus
MGP_SPRETEiJ_G0022448	Mrps18b	94	50.568	ENSMZEG00005017910	mrps18b	85	46.759	Maylandia_zebra
MGP_SPRETEiJ_G0022448	Mrps18b	58	53.704	ENSMZEG00005019697	-	67	46.853	Maylandia_zebra
MGP_SPRETEiJ_G0022448	Mrps18b	100	87.037	ENSMAUG00000019160	Mrps18b	100	87.037	Mesocricetus_auratus
MGP_SPRETEiJ_G0022448	Mrps18b	100	77.734	ENSMICG00000031536	MRPS18B	99	77.734	Microcebus_murinus
MGP_SPRETEiJ_G0022448	Mrps18b	91	88.312	ENSMOCG00000013273	Mrps18b	100	86.454	Microtus_ochrogaster
MGP_SPRETEiJ_G0022448	Mrps18b	78	54.110	ENSMMOG00000012076	mrps18b	82	48.205	Mola_mola
MGP_SPRETEiJ_G0022448	Mrps18b	86	75.000	ENSMODG00000015933	MRPS18B	95	68.559	Monodelphis_domestica
MGP_SPRETEiJ_G0022448	Mrps18b	92	50.867	ENSMALG00000019456	mrps18b	82	47.170	Monopterus_albus
MGP_SPRETEiJ_G0022448	Mrps18b	100	100.000	MGP_CAROLIEiJ_G0021541	Mrps18b	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0022448	Mrps18b	100	100.000	ENSMUSG00000024436	Mrps18b	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0022448	Mrps18b	100	94.882	MGP_PahariEiJ_G0020535	Mrps18b	100	94.882	Mus_pahari
MGP_SPRETEiJ_G0022448	Mrps18b	98	79.459	ENSMPUG00000011739	MRPS18B	99	77.432	Mustela_putorius_furo
MGP_SPRETEiJ_G0022448	Mrps18b	98	79.459	ENSMLUG00000008850	MRPS18B	99	78.039	Myotis_lucifugus
MGP_SPRETEiJ_G0022448	Mrps18b	94	83.750	ENSNGAG00000017874	Mrps18b	99	83.750	Nannospalax_galili
MGP_SPRETEiJ_G0022448	Mrps18b	51	53.684	ENSNBRG00000020716	-	83	41.830	Neolamprologus_brichardi
MGP_SPRETEiJ_G0022448	Mrps18b	100	77.432	ENSNLEG00000005224	MRPS18B	99	77.432	Nomascus_leucogenys
MGP_SPRETEiJ_G0022448	Mrps18b	89	75.449	ENSMEUG00000012457	MRPS18B	95	71.179	Notamacropus_eugenii
MGP_SPRETEiJ_G0022448	Mrps18b	80	86.154	ENSODEG00000017923	-	84	77.206	Octodon_degus
MGP_SPRETEiJ_G0022448	Mrps18b	94	51.136	ENSONIG00000015945	mrps18b	85	47.685	Oreochromis_niloticus
MGP_SPRETEiJ_G0022448	Mrps18b	98	80.541	ENSOCUG00000002149	MRPS18B	99	77.043	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0022448	Mrps18b	73	56.618	ENSORLG00000010546	mrps18b	78	54.023	Oryzias_latipes
MGP_SPRETEiJ_G0022448	Mrps18b	72	57.778	ENSORLG00020018506	mrps18b	74	54.598	Oryzias_latipes_hni
MGP_SPRETEiJ_G0022448	Mrps18b	72	57.778	ENSORLG00015010248	mrps18b	83	50.251	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0022448	Mrps18b	72	57.037	ENSOMEG00000008194	mrps18b	74	53.448	Oryzias_melastigma
MGP_SPRETEiJ_G0022448	Mrps18b	98	77.838	ENSOGAG00000004435	MRPS18B	100	75.486	Otolemur_garnettii
MGP_SPRETEiJ_G0022448	Mrps18b	100	77.821	ENSOARG00000012647	MRPS18B	99	77.821	Ovis_aries
MGP_SPRETEiJ_G0022448	Mrps18b	100	76.265	ENSPPAG00000018246	-	99	76.265	Pan_paniscus
MGP_SPRETEiJ_G0022448	Mrps18b	100	77.432	ENSPPAG00000039692	-	99	77.432	Pan_paniscus
MGP_SPRETEiJ_G0022448	Mrps18b	94	79.079	ENSPPRG00000003538	MRPS18B	99	76.265	Panthera_pardus
MGP_SPRETEiJ_G0022448	Mrps18b	94	79.079	ENSPTIG00000016443	MRPS18B	99	76.265	Panthera_tigris_altaica
MGP_SPRETEiJ_G0022448	Mrps18b	100	77.432	ENSPTRG00000017932	MRPS18B	99	77.432	Pan_troglodytes
MGP_SPRETEiJ_G0022448	Mrps18b	100	75.486	ENSPANG00000017647	MRPS18B	99	75.486	Papio_anubis
MGP_SPRETEiJ_G0022448	Mrps18b	73	57.353	ENSPKIG00000011007	mrps18b	71	51.705	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0022448	Mrps18b	73	62.774	ENSPSIG00000011533	MRPS18B	94	52.000	Pelodiscus_sinensis
MGP_SPRETEiJ_G0022448	Mrps18b	97	44.828	ENSPMGG00000020546	mrps18b	99	44.444	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0022448	Mrps18b	100	87.795	ENSPEMG00000001695	Mrps18b	99	90.129	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0022448	Mrps18b	91	49.425	ENSPMAG00000001665	mrps18b	93	49.321	Petromyzon_marinus
MGP_SPRETEiJ_G0022448	Mrps18b	93	68.354	ENSPCIG00000014983	MRPS18B	84	68.996	Phascolarctos_cinereus
MGP_SPRETEiJ_G0022448	Mrps18b	72	57.778	ENSPFOG00000016437	mrps18b	66	48.925	Poecilia_formosa
MGP_SPRETEiJ_G0022448	Mrps18b	91	51.176	ENSPLAG00000002566	mrps18b	76	50.000	Poecilia_latipinna
MGP_SPRETEiJ_G0022448	Mrps18b	72	58.209	ENSPMEG00000010978	mrps18b	61	51.149	Poecilia_mexicana
MGP_SPRETEiJ_G0022448	Mrps18b	72	58.955	ENSPREG00000012186	mrps18b	65	51.429	Poecilia_reticulata
MGP_SPRETEiJ_G0022448	Mrps18b	100	69.650	ENSPPYG00000016412	MRPS18B	99	69.650	Pongo_abelii
MGP_SPRETEiJ_G0022448	Mrps18b	100	75.875	ENSPCAG00000017028	MRPS18B	99	75.875	Procavia_capensis
MGP_SPRETEiJ_G0022448	Mrps18b	98	68.400	ENSPCOG00000015431	MRPS18B	99	68.400	Propithecus_coquereli
MGP_SPRETEiJ_G0022448	Mrps18b	99	76.863	ENSPVAG00000003981	MRPS18B	99	76.863	Pteropus_vampyrus
MGP_SPRETEiJ_G0022448	Mrps18b	94	50.568	ENSPNYG00000011383	mrps18b	86	46.759	Pundamilia_nyererei
MGP_SPRETEiJ_G0022448	Mrps18b	51	53.684	ENSPNYG00000004553	-	70	46.154	Pundamilia_nyererei
MGP_SPRETEiJ_G0022448	Mrps18b	76	56.338	ENSPNAG00000029858	mrps18b	74	53.591	Pygocentrus_nattereri
MGP_SPRETEiJ_G0022448	Mrps18b	100	90.945	ENSRNOG00000000804	Mrps18b	98	90.945	Rattus_norvegicus
MGP_SPRETEiJ_G0022448	Mrps18b	100	76.654	ENSRBIG00000037128	MRPS18B	99	76.654	Rhinopithecus_bieti
MGP_SPRETEiJ_G0022448	Mrps18b	100	76.654	ENSRROG00000017497	MRPS18B	99	76.654	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0022448	Mrps18b	98	78.378	ENSSBOG00000023414	MRPS18B	100	76.613	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0022448	Mrps18b	89	70.060	ENSSHAG00000006769	MRPS18B	90	67.105	Sarcophilus_harrisii
MGP_SPRETEiJ_G0022448	Mrps18b	73	58.394	ENSSFOG00015015664	mrps18b	77	52.973	Scleropages_formosus
MGP_SPRETEiJ_G0022448	Mrps18b	73	59.854	ENSSMAG00000020784	mrps18b	72	54.237	Scophthalmus_maximus
MGP_SPRETEiJ_G0022448	Mrps18b	95	47.917	ENSSDUG00000009519	mrps18b	97	46.121	Seriola_dumerili
MGP_SPRETEiJ_G0022448	Mrps18b	73	56.204	ENSSLDG00000000473	mrps18b	58	54.037	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0022448	Mrps18b	73	63.504	ENSSPUG00000015230	MRPS18B	72	60.000	Sphenodon_punctatus
MGP_SPRETEiJ_G0022448	Mrps18b	73	58.088	ENSSPAG00000004508	mrps18b	72	53.409	Stegastes_partitus
MGP_SPRETEiJ_G0022448	Mrps18b	100	77.043	ENSSSCG00000029425	MRPS18B	99	77.043	Sus_scrofa
MGP_SPRETEiJ_G0022448	Mrps18b	96	47.802	ENSTRUG00000022309	mrps18b	79	43.556	Takifugu_rubripes
MGP_SPRETEiJ_G0022448	Mrps18b	100	77.432	ENSTTRG00000008313	MRPS18B	99	77.432	Tursiops_truncatus
MGP_SPRETEiJ_G0022448	Mrps18b	100	77.432	ENSUAMG00000005833	MRPS18B	99	77.432	Ursus_americanus
MGP_SPRETEiJ_G0022448	Mrps18b	100	77.432	ENSUMAG00000019652	MRPS18B	76	77.432	Ursus_maritimus
MGP_SPRETEiJ_G0022448	Mrps18b	98	76.216	ENSVPAG00000001181	MRPS18B	100	75.648	Vicugna_pacos
MGP_SPRETEiJ_G0022448	Mrps18b	98	80.000	ENSVVUG00000009631	MRPS18B	99	78.125	Vulpes_vulpes
MGP_SPRETEiJ_G0022448	Mrps18b	86	53.416	ENSXETG00000032503	MRPS18B	89	50.000	Xenopus_tropicalis
MGP_SPRETEiJ_G0022448	Mrps18b	72	59.259	ENSXCOG00000003011	mrps18b	86	52.299	Xiphophorus_couchianus
MGP_SPRETEiJ_G0022448	Mrps18b	72	58.519	ENSXMAG00000016698	mrps18b	71	51.724	Xiphophorus_maculatus