EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022750 (Gene tree)
Gene ID: -
Gene Symbol: Rab12
Alias: 2900054P15Rik
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 24850 bases
Position: chr17:64720992-64745841
Accession: 894284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0047401	MMR_HSR1	PF01926.23	5.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0047401	-	2060	-	MGP_SPRETEiJ_P0047401	292 (aa)	-	-
MGP_SPRETEiJ_T0047402	-	664	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0047403	-	381	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0047404	-	673	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0022750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022750's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0022750	Rab12	58	40.588	MGP_SPRETEiJ_G0026114	Rab25	79	40.588
MGP_SPRETEiJ_G0022750	Rab12	75	36.000	MGP_SPRETEiJ_G0018027	Rab5c	86	38.806
MGP_SPRETEiJ_G0022750	Rab12	58	50.296	MGP_SPRETEiJ_G0016958	Rab1a	83	50.296
MGP_SPRETEiJ_G0022750	Rab12	58	49.704	MGP_SPRETEiJ_G0023450	Rab1b	84	49.704
MGP_SPRETEiJ_G0022750	Rab12	53	31.847	MGP_SPRETEiJ_G0033706	Mras	80	32.143
MGP_SPRETEiJ_G0022750	Rab12	57	42.262	MGP_SPRETEiJ_G0034360	Rab39b	78	42.262
MGP_SPRETEiJ_G0022750	Rab12	63	37.696	MGP_SPRETEiJ_G0034202	Rab33a	68	41.104
MGP_SPRETEiJ_G0022750	Rab12	53	38.462	MGP_SPRETEiJ_G0022741	Rab31	79	38.462
MGP_SPRETEiJ_G0022750	Rab12	70	37.264	MGP_SPRETEiJ_G0022327	Rab11b	93	43.885
MGP_SPRETEiJ_G0022750	Rab12	59	42.775	MGP_SPRETEiJ_G0026744	Rab2a	85	42.308
MGP_SPRETEiJ_G0022750	Rab12	51	30.464	MGP_SPRETEiJ_G0026395	Nras	97	30.405
MGP_SPRETEiJ_G0022750	Rab12	56	35.329	MGP_SPRETEiJ_G0034594	Rab9b	83	35.329
MGP_SPRETEiJ_G0022750	Rab12	54	40.252	MGP_SPRETEiJ_G0031162	Rab6a	76	40.252
MGP_SPRETEiJ_G0022750	Rab12	53	34.194	MGP_SPRETEiJ_G0021073	Rabl2	67	34.194
MGP_SPRETEiJ_G0022750	Rab12	63	34.783	MGP_SPRETEiJ_G0016774	Rab5b	85	34.783
MGP_SPRETEiJ_G0022750	Rab12	72	43.396	MGP_SPRETEiJ_G0018720	Rab15	88	45.213
MGP_SPRETEiJ_G0022750	Rab12	59	45.614	MGP_SPRETEiJ_G0028630	Rab35	94	43.455
MGP_SPRETEiJ_G0022750	Rab12	70	37.799	MGP_SPRETEiJ_G0033485	Rab11a	90	43.796
MGP_SPRETEiJ_G0022750	Rab12	72	33.023	MGP_SPRETEiJ_G0017637	Rab34	77	33.023
MGP_SPRETEiJ_G0022750	Rab12	64	36.316	MGP_SPRETEiJ_G0029636	Rab7	81	50.704
MGP_SPRETEiJ_G0022750	Rab12	54	37.107	MGP_SPRETEiJ_G0025672	Rab22a	81	37.107
MGP_SPRETEiJ_G0022750	Rab12	54	30.818	MGP_SPRETEiJ_G0028020	Rheb	85	30.818
MGP_SPRETEiJ_G0022750	Rab12	68	39.500	MGP_SPRETEiJ_G0020130	Rab2b	80	47.097
MGP_SPRETEiJ_G0022750	Rab12	53	40.385	MGP_SPRETEiJ_G0033730	Rab6b	75	40.385
MGP_SPRETEiJ_G0022750	Rab12	52	31.373	MGP_SPRETEiJ_G0030102	Kras	87	31.325
MGP_SPRETEiJ_G0022750	Rab12	62	47.778	MGP_SPRETEiJ_G0031102	Rab30	88	47.778
MGP_SPRETEiJ_G0022750	Rab12	67	37.755	MGP_SPRETEiJ_G0024394	Rab14	97	39.456
MGP_SPRETEiJ_G0022750	Rab12	56	49.697	MGP_SPRETEiJ_G0022894	Rab18	79	49.697
MGP_SPRETEiJ_G0022750	Rab12	57	35.119	MGP_SPRETEiJ_G0014820	Rab23	69	35.119
MGP_SPRETEiJ_G0022750	Rab12	55	42.593	MGP_SPRETEiJ_G0018231	Rab37	75	43.210
MGP_SPRETEiJ_G0022750	Rab12	66	36.869	MGP_SPRETEiJ_G0025911	Rab33b	83	36.224

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022750	Rab12	85	94.355	ENSG00000206418	RAB12	100	95.902	Homo_sapiens
MGP_SPRETEiJ_G0022750	Rab12	76	90.541	ENSAMEG00000007452	RAB12	100	88.362	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0022750	Rab12	83	83.806	ENSACIG00000020616	rab12	93	84.211	Amphilophus_citrinellus
MGP_SPRETEiJ_G0022750	Rab12	83	83.740	ENSAOCG00000002130	rab12	93	84.581	Amphiprion_ocellaris
MGP_SPRETEiJ_G0022750	Rab12	83	83.740	ENSAPEG00000013255	rab12	93	84.581	Amphiprion_percula
MGP_SPRETEiJ_G0022750	Rab12	83	84.490	ENSATEG00000019683	rab12	93	85.398	Anabas_testudineus
MGP_SPRETEiJ_G0022750	Rab12	76	97.738	ENSACAG00000003360	RAB12	100	87.984	Anolis_carolinensis
MGP_SPRETEiJ_G0022750	Rab12	83	84.146	ENSACLG00000007696	rab12	93	85.022	Astatotilapia_calliptera
MGP_SPRETEiJ_G0022750	Rab12	77	86.607	ENSAMXG00000004882	rab12	93	80.870	Astyanax_mexicanus
MGP_SPRETEiJ_G0022750	Rab12	83	97.541	ENSBTAG00000010356	RAB12	100	97.541	Bos_taurus
MGP_SPRETEiJ_G0022750	Rab12	86	94.444	ENSCJAG00000015468	RAB12	100	80.588	Callithrix_jacchus
MGP_SPRETEiJ_G0022750	Rab12	100	89.078	ENSCAFG00020023721	RAB12	100	91.497	Canis_lupus_dingo
MGP_SPRETEiJ_G0022750	Rab12	83	97.541	ENSCHIG00000016103	RAB12	100	97.541	Capra_hircus
MGP_SPRETEiJ_G0022750	Rab12	72	98.571	ENSCPOG00000022689	RAB12	100	98.571	Cavia_porcellus
MGP_SPRETEiJ_G0022750	Rab12	83	95.510	ENSCCAG00000022862	RAB12	100	95.510	Cebus_capucinus
MGP_SPRETEiJ_G0022750	Rab12	80	97.009	ENSCATG00000037784	RAB12	97	97.009	Cercocebus_atys
MGP_SPRETEiJ_G0022750	Rab12	86	94.118	ENSCSAG00000017569	RAB12	100	78.902	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0022750	Rab12	83	91.429	ENSCPBG00000028375	RAB12	100	91.429	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0022750	Rab12	75	98.636	ENSCANG00000031453	RAB12	100	98.636	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0022750	Rab12	100	95.563	ENSCGRG00001006958	Rab12	100	95.563	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0022750	Rab12	83	83.740	ENSCSEG00000016933	rab12	93	84.581	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0022750	Rab12	76	88.341	ENSCVAG00000003539	rab12	93	84.348	Cyprinodon_variegatus
MGP_SPRETEiJ_G0022750	Rab12	83	82.716	ENSDARG00000089428	rab12	93	82.589	Danio_rerio
MGP_SPRETEiJ_G0022750	Rab12	100	81.818	ENSDNOG00000046064	RAB12	73	83.072	Dasypus_novemcinctus
MGP_SPRETEiJ_G0022750	Rab12	78	98.238	ENSDORG00000008920	Rab12	100	98.238	Dipodomys_ordii
MGP_SPRETEiJ_G0022750	Rab12	67	66.667	ENSEBUG00000006581	rab12	93	66.667	Eptatretus_burgeri
MGP_SPRETEiJ_G0022750	Rab12	100	91.781	ENSEASG00005002926	RAB12	100	91.781	Equus_asinus_asinus
MGP_SPRETEiJ_G0022750	Rab12	100	78.886	ENSECAG00000007384	RAB12	100	80.645	Equus_caballus
MGP_SPRETEiJ_G0022750	Rab12	83	80.658	ENSELUG00000007123	rab12	93	81.250	Esox_lucius
MGP_SPRETEiJ_G0022750	Rab12	100	77.876	ENSFCAG00000027710	RAB12	100	80.826	Felis_catus
MGP_SPRETEiJ_G0022750	Rab12	75	88.128	ENSFHEG00000004319	rab12	93	82.969	Fundulus_heteroclitus
MGP_SPRETEiJ_G0022750	Rab12	71	83.575	ENSGMOG00000012335	rab12	87	83.575	Gadus_morhua
MGP_SPRETEiJ_G0022750	Rab12	83	89.412	ENSGALG00000033608	RAB12	100	92.400	Gallus_gallus
MGP_SPRETEiJ_G0022750	Rab12	76	80.717	ENSGACG00000016639	rab12	100	81.166	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0022750	Rab12	83	91.429	ENSGAGG00000007278	RAB12	100	91.429	Gopherus_agassizii
MGP_SPRETEiJ_G0022750	Rab12	83	84.146	ENSHBUG00000008497	rab12	93	85.022	Haplochromis_burtoni
MGP_SPRETEiJ_G0022750	Rab12	83	86.777	ENSHGLG00000006189	RAB12	90	89.669	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0022750	Rab12	83	81.301	ENSHCOG00000012376	rab12	93	81.057	Hippocampus_comes
MGP_SPRETEiJ_G0022750	Rab12	77	86.161	ENSIPUG00000017401	rab12	93	80.702	Ictalurus_punctatus
MGP_SPRETEiJ_G0022750	Rab12	78	96.476	ENSSTOG00000025122	RAB12	100	96.476	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0022750	Rab12	78	98.246	ENSJJAG00000019064	Rab12	100	98.246	Jaculus_jaculus
MGP_SPRETEiJ_G0022750	Rab12	83	81.893	ENSKMAG00000020056	rab12	93	82.589	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0022750	Rab12	83	84.490	ENSLBEG00000013756	rab12	93	85.398	Labrus_bergylta
MGP_SPRETEiJ_G0022750	Rab12	88	79.924	ENSLACG00000010461	RAB12	100	83.133	Latimeria_chalumnae
MGP_SPRETEiJ_G0022750	Rab12	77	89.732	ENSLOCG00000002680	rab12	100	84.337	Lepisosteus_oculatus
MGP_SPRETEiJ_G0022750	Rab12	83	95.122	ENSMFAG00000043551	RAB12	100	95.122	Macaca_fascicularis
MGP_SPRETEiJ_G0022750	Rab12	100	82.877	ENSMNEG00000040853	RAB12	92	97.414	Macaca_nemestrina
MGP_SPRETEiJ_G0022750	Rab12	83	84.082	ENSMAMG00000006862	rab12	93	84.956	Mastacembelus_armatus
MGP_SPRETEiJ_G0022750	Rab12	83	84.146	ENSMZEG00005024316	rab12	93	85.022	Maylandia_zebra
MGP_SPRETEiJ_G0022750	Rab12	70	98.529	ENSMGAG00000009197	RAB12	100	98.529	Meleagris_gallopavo
MGP_SPRETEiJ_G0022750	Rab12	100	96.259	ENSMAUG00000008371	Rab12	100	96.259	Mesocricetus_auratus
MGP_SPRETEiJ_G0022750	Rab12	77	97.768	ENSMICG00000030661	RAB12	99	95.339	Microcebus_murinus
MGP_SPRETEiJ_G0022750	Rab12	75	98.630	ENSMOCG00000000452	Rab12	100	98.630	Microtus_ochrogaster
MGP_SPRETEiJ_G0022750	Rab12	100	78.698	ENSMODG00000021452	RAB12	100	79.118	Monodelphis_domestica
MGP_SPRETEiJ_G0022750	Rab12	77	86.161	ENSMALG00000015762	rab12	93	83.628	Monopterus_albus
MGP_SPRETEiJ_G0022750	Rab12	100	99.658	MGP_CAROLIEiJ_G0021839	Rab12	100	99.658	Mus_caroli
MGP_SPRETEiJ_G0022750	Rab12	100	99.658	ENSMUSG00000023460	Rab12	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0022750	Rab12	100	98.973	MGP_PahariEiJ_G0020826	Rab12	100	100.000	Mus_pahari
MGP_SPRETEiJ_G0022750	Rab12	83	95.885	ENSMLUG00000002883	RAB12	100	95.885	Myotis_lucifugus
MGP_SPRETEiJ_G0022750	Rab12	78	96.507	ENSNGAG00000024103	-	98	96.507	Nannospalax_galili
MGP_SPRETEiJ_G0022750	Rab12	83	84.774	ENSNGAG00000019722	-	100	84.774	Nannospalax_galili
MGP_SPRETEiJ_G0022750	Rab12	83	84.146	ENSNBRG00000014428	rab12	93	85.022	Neolamprologus_brichardi
MGP_SPRETEiJ_G0022750	Rab12	83	95.492	ENSNLEG00000006939	RAB12	100	95.492	Nomascus_leucogenys
MGP_SPRETEiJ_G0022750	Rab12	83	94.715	ENSMEUG00000000493	RAB12	100	94.715	Notamacropus_eugenii
MGP_SPRETEiJ_G0022750	Rab12	75	98.630	ENSODEG00000006414	RAB12	100	98.630	Octodon_degus
MGP_SPRETEiJ_G0022750	Rab12	83	84.146	ENSONIG00000018469	rab12	93	85.022	Oreochromis_niloticus
MGP_SPRETEiJ_G0022750	Rab12	83	84.898	ENSORLG00000003902	rab12	93	85.841	Oryzias_latipes
MGP_SPRETEiJ_G0022750	Rab12	83	84.898	ENSORLG00020005131	rab12	93	85.841	Oryzias_latipes_hni
MGP_SPRETEiJ_G0022750	Rab12	83	84.490	ENSORLG00015007869	rab12	93	85.398	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0022750	Rab12	83	84.898	ENSOMEG00000008191	rab12	93	85.841	Oryzias_melastigma
MGP_SPRETEiJ_G0022750	Rab12	72	98.571	ENSOGAG00000028002	RAB12	99	98.571	Otolemur_garnettii
MGP_SPRETEiJ_G0022750	Rab12	72	98.095	ENSOARG00000000728	RAB12	96	91.880	Ovis_aries
MGP_SPRETEiJ_G0022750	Rab12	71	99.029	ENSPPAG00000009152	RAB12	97	99.029	Pan_paniscus
MGP_SPRETEiJ_G0022750	Rab12	83	96.311	ENSPPRG00000024521	RAB12	100	96.311	Panthera_pardus
MGP_SPRETEiJ_G0022750	Rab12	83	95.902	ENSPTRG00000009853	RAB12	100	95.902	Pan_troglodytes
MGP_SPRETEiJ_G0022750	Rab12	83	95.142	ENSPANG00000009320	RAB12	100	95.142	Papio_anubis
MGP_SPRETEiJ_G0022750	Rab12	65	91.579	ENSPKIG00000008579	rab12	93	87.500	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0022750	Rab12	75	85.780	ENSPMGG00000001890	rab12	93	81.858	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0022750	Rab12	100	97.945	ENSPEMG00000021032	Rab12	100	97.945	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0022750	Rab12	100	77.193	ENSPCIG00000010453	RAB12	85	79.472	Phascolarctos_cinereus
MGP_SPRETEiJ_G0022750	Rab12	83	81.781	ENSPFOG00000001579	rab12	93	83.333	Poecilia_formosa
MGP_SPRETEiJ_G0022750	Rab12	83	81.781	ENSPLAG00000013594	rab12	93	83.333	Poecilia_latipinna
MGP_SPRETEiJ_G0022750	Rab12	83	81.781	ENSPMEG00000010417	rab12	93	83.333	Poecilia_mexicana
MGP_SPRETEiJ_G0022750	Rab12	83	81.781	ENSPREG00000017487	rab12	93	83.333	Poecilia_reticulata
MGP_SPRETEiJ_G0022750	Rab12	100	77.059	ENSPPYG00000009015	-	100	80.294	Pongo_abelii
MGP_SPRETEiJ_G0022750	Rab12	83	96.721	ENSPCAG00000015007	RAB12	100	96.721	Procavia_capensis
MGP_SPRETEiJ_G0022750	Rab12	83	95.902	ENSPCOG00000019816	RAB12	100	95.902	Propithecus_coquereli
MGP_SPRETEiJ_G0022750	Rab12	83	95.902	ENSPVAG00000002757	RAB12	100	95.902	Pteropus_vampyrus
MGP_SPRETEiJ_G0022750	Rab12	83	84.146	ENSPNYG00000005654	rab12	93	85.022	Pundamilia_nyererei
MGP_SPRETEiJ_G0022750	Rab12	83	84.146	ENSPNYG00000023905	rab12	93	85.022	Pundamilia_nyererei
MGP_SPRETEiJ_G0022750	Rab12	77	87.946	ENSPNAG00000015031	rab12	93	81.739	Pygocentrus_nattereri
MGP_SPRETEiJ_G0022750	Rab12	83	91.870	ENSRNOG00000019295	Rab12	100	92.276	Rattus_norvegicus
MGP_SPRETEiJ_G0022750	Rab12	79	97.414	ENSRBIG00000028760	RAB12	99	97.414	Rhinopithecus_bieti
MGP_SPRETEiJ_G0022750	Rab12	78	98.246	ENSRROG00000019249	RAB12	95	98.246	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0022750	Rab12	72	97.642	ENSSBOG00000021125	RAB12	81	97.642	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0022750	Rab12	76	92.920	ENSSHAG00000001489	RAB12	100	92.920	Sarcophilus_harrisii
MGP_SPRETEiJ_G0022750	Rab12	75	87.671	ENSSMAG00000012678	rab12	93	84.071	Scophthalmus_maximus
MGP_SPRETEiJ_G0022750	Rab12	83	84.490	ENSSDUG00000008505	rab12	93	85.398	Seriola_dumerili
MGP_SPRETEiJ_G0022750	Rab12	83	84.490	ENSSLDG00000022239	rab12	93	85.398	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0022750	Rab12	83	91.057	ENSSPUG00000003222	RAB12	100	93.089	Sphenodon_punctatus
MGP_SPRETEiJ_G0022750	Rab12	83	84.146	ENSSPAG00000010822	rab12	93	85.022	Stegastes_partitus
MGP_SPRETEiJ_G0022750	Rab12	83	96.721	ENSSSCG00000038026	RAB12	100	96.721	Sus_scrofa
MGP_SPRETEiJ_G0022750	Rab12	78	96.916	ENSTGUG00000009889	RAB12	100	91.600	Taeniopygia_guttata
MGP_SPRETEiJ_G0022750	Rab12	83	82.449	ENSTRUG00000024455	rab12	93	83.186	Takifugu_rubripes
MGP_SPRETEiJ_G0022750	Rab12	83	82.857	ENSTNIG00000014859	rab12	93	83.186	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0022750	Rab12	76	98.198	ENSTTRG00000008711	RAB12	100	98.198	Tursiops_truncatus
MGP_SPRETEiJ_G0022750	Rab12	83	96.311	ENSUAMG00000018092	RAB12	100	96.311	Ursus_americanus
MGP_SPRETEiJ_G0022750	Rab12	75	98.630	ENSVVUG00000011748	RAB12	99	98.630	Vulpes_vulpes
MGP_SPRETEiJ_G0022750	Rab12	86	85.938	ENSXETG00000004289	rab12	82	85.938	Xenopus_tropicalis
MGP_SPRETEiJ_G0022750	Rab12	83	81.781	ENSXCOG00000019310	rab12	93	83.772	Xiphophorus_couchianus
MGP_SPRETEiJ_G0022750	Rab12	83	82.186	ENSXMAG00000023617	rab12	93	83.772	Xiphophorus_maculatus