EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022828 (Gene tree)
Gene ID: -
Gene Symbol: Thumpd2
Alias: 2810025A12Rik
Full Name: THUMP domain containing 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 40629 bases
Position: chr17:79961784-80002412
Accession: 1919417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0047637	THUMP	PF02926.17	1.5e-05	1	1
MGP_SPRETEiJ_P0047637	MTS	PF05175.14	1e-05	1	1
MGP_SPRETEiJ_P0047637	UPF0020	PF01170.18	9.3e-26	1	1
MGP_SPRETEiJ_P0047637	Methyltransf_31	PF13847.6	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0047637	-	1855	-	MGP_SPRETEiJ_P0047637	528 (aa)	-	-
MGP_SPRETEiJ_T0047638	-	1616	-	MGP_SPRETEiJ_P0047638	458 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0022828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022828	Thumpd2	95	68.254	ENSG00000138050	THUMPD2	89	82.051	Homo_sapiens
MGP_SPRETEiJ_G0022828	Thumpd2	74	43.434	ENSAPOG00000001802	-	67	43.434	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0022828	Thumpd2	93	62.413	ENSAMEG00000008664	THUMPD2	99	65.435	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0022828	Thumpd2	87	33.902	ENSACIG00000011677	THUMPD2	97	33.902	Amphilophus_citrinellus
MGP_SPRETEiJ_G0022828	Thumpd2	74	43.390	ENSAOCG00000000927	THUMPD2	67	43.390	Amphiprion_ocellaris
MGP_SPRETEiJ_G0022828	Thumpd2	74	43.051	ENSAPEG00000000981	thumpd2	67	43.051	Amphiprion_percula
MGP_SPRETEiJ_G0022828	Thumpd2	77	43.871	ENSATEG00000012329	thumpd2	66	43.871	Anabas_testudineus
MGP_SPRETEiJ_G0022828	Thumpd2	89	47.500	ENSAPLG00000008775	THUMPD2	99	49.375	Anas_platyrhynchos
MGP_SPRETEiJ_G0022828	Thumpd2	90	46.275	ENSACAG00000000538	THUMPD2	98	47.571	Anolis_carolinensis
MGP_SPRETEiJ_G0022828	Thumpd2	95	68.254	ENSANAG00000034298	THUMPD2	100	68.254	Aotus_nancymaae
MGP_SPRETEiJ_G0022828	Thumpd2	93	36.590	ENSACLG00000025840	thumpd2	90	45.392	Astatotilapia_calliptera
MGP_SPRETEiJ_G0022828	Thumpd2	91	34.497	ENSAMXG00000011080	thumpd2	97	34.702	Astyanax_mexicanus
MGP_SPRETEiJ_G0022828	Thumpd2	95	66.799	ENSBTAG00000004722	THUMPD2	99	66.799	Bos_taurus
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.857	ENSCJAG00000014891	THUMPD2	100	67.857	Callithrix_jacchus
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.594	ENSCAFG00000006471	THUMPD2	100	67.594	Canis_familiaris
MGP_SPRETEiJ_G0022828	Thumpd2	94	64.120	ENSCAFG00020021695	THUMPD2	100	67.230	Canis_lupus_dingo
MGP_SPRETEiJ_G0022828	Thumpd2	95	65.606	ENSCHIG00000013921	THUMPD2	99	65.606	Capra_hircus
MGP_SPRETEiJ_G0022828	Thumpd2	90	65.144	ENSTSYG00000010555	THUMPD2	99	65.366	Carlito_syrichta
MGP_SPRETEiJ_G0022828	Thumpd2	95	64.854	ENSCPOG00000003368	THUMPD2	100	64.854	Cavia_porcellus
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.594	ENSCCAG00000034405	THUMPD2	100	67.594	Cebus_capucinus
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.659	ENSCATG00000012396	THUMPD2	100	67.659	Cercocebus_atys
MGP_SPRETEiJ_G0022828	Thumpd2	95	65.873	ENSCLAG00000003029	THUMPD2	99	65.873	Chinchilla_lanigera
MGP_SPRETEiJ_G0022828	Thumpd2	89	66.180	ENSCSAG00000012431	THUMPD2	100	66.180	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0022828	Thumpd2	67	61.408	ENSCHOG00000000360	THUMPD2	100	61.408	Choloepus_hoffmanni
MGP_SPRETEiJ_G0022828	Thumpd2	92	53.815	ENSCPBG00000018272	THUMPD2	94	53.815	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.594	ENSCANG00000032596	THUMPD2	100	67.594	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0022828	Thumpd2	100	78.679	ENSCGRG00001009939	Thumpd2	100	78.679	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0022828	Thumpd2	96	77.201	ENSCGRG00000006284	Thumpd2	100	77.660	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0022828	Thumpd2	91	35.729	ENSDARG00000093070	thumpd2	98	36.605	Danio_rerio
MGP_SPRETEiJ_G0022828	Thumpd2	93	64.372	ENSDNOG00000019834	THUMPD2	98	64.372	Dasypus_novemcinctus
MGP_SPRETEiJ_G0022828	Thumpd2	90	54.265	ENSETEG00000001300	THUMPD2	99	56.103	Echinops_telfairi
MGP_SPRETEiJ_G0022828	Thumpd2	60	41.608	ENSEBUG00000010906	THUMPD2	85	41.608	Eptatretus_burgeri
MGP_SPRETEiJ_G0022828	Thumpd2	67	30.541	ENSEBUG00000004221	thumpd3	82	30.541	Eptatretus_burgeri
MGP_SPRETEiJ_G0022828	Thumpd2	98	66.027	ENSEASG00005005106	THUMPD2	99	67.767	Equus_asinus_asinus
MGP_SPRETEiJ_G0022828	Thumpd2	95	66.339	ENSECAG00000010799	THUMPD2	97	67.717	Equus_caballus
MGP_SPRETEiJ_G0022828	Thumpd2	91	52.983	ENSEEUG00000000105	THUMPD2	100	54.348	Erinaceus_europaeus
MGP_SPRETEiJ_G0022828	Thumpd2	91	37.275	ENSELUG00000003735	thumpd2	92	38.277	Esox_lucius
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.197	ENSFCAG00000006809	THUMPD2	100	67.659	Felis_catus
MGP_SPRETEiJ_G0022828	Thumpd2	92	47.260	ENSFALG00000008655	THUMPD2	91	47.835	Ficedula_albicollis
MGP_SPRETEiJ_G0022828	Thumpd2	91	36.312	ENSFHEG00000011402	thumpd2	97	36.312	Fundulus_heteroclitus
MGP_SPRETEiJ_G0022828	Thumpd2	54	36.455	ENSGMOG00000002236	-	100	35.154	Gadus_morhua
MGP_SPRETEiJ_G0022828	Thumpd2	90	48.694	ENSGALG00000009119	THUMPD2	99	48.694	Gallus_gallus
MGP_SPRETEiJ_G0022828	Thumpd2	91	35.728	ENSGAFG00000012683	thumpd2	99	35.453	Gambusia_affinis
MGP_SPRETEiJ_G0022828	Thumpd2	83	46.803	ENSGAGG00000001325	THUMPD2	98	46.803	Gopherus_agassizii
MGP_SPRETEiJ_G0022828	Thumpd2	95	68.254	ENSGGOG00000001608	THUMPD2	100	68.254	Gorilla_gorilla
MGP_SPRETEiJ_G0022828	Thumpd2	71	42.604	ENSHBUG00000011780	-	65	42.442	Haplochromis_burtoni
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.594	ENSHGLG00000019145	THUMPD2	99	67.594	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0022828	Thumpd2	81	41.176	ENSIPUG00000015283	thumpd2	98	41.176	Ictalurus_punctatus
MGP_SPRETEiJ_G0022828	Thumpd2	95	68.911	ENSSTOG00000027472	THUMPD2	100	68.911	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0022828	Thumpd2	90	64.578	ENSJJAG00000020374	Thumpd2	97	65.870	Jaculus_jaculus
MGP_SPRETEiJ_G0022828	Thumpd2	85	41.447	ENSLBEG00000007585	THUMPD2	95	36.321	Labrus_bergylta
MGP_SPRETEiJ_G0022828	Thumpd2	91	39.535	ENSLOCG00000015747	THUMPD2	97	43.069	Lepisosteus_oculatus
MGP_SPRETEiJ_G0022828	Thumpd2	56	66.102	ENSLAFG00000005383	-	97	66.102	Loxodonta_africana
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.659	ENSMFAG00000031464	THUMPD2	100	67.659	Macaca_fascicularis
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.857	ENSMMUG00000011841	THUMPD2	100	67.857	Macaca_mulatta
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.659	ENSMNEG00000037438	THUMPD2	100	67.659	Macaca_nemestrina
MGP_SPRETEiJ_G0022828	Thumpd2	90	65.947	ENSMLEG00000031490	THUMPD2	100	67.100	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0022828	Thumpd2	75	37.101	ENSMAMG00000022090	thumpd2	81	37.101	Mastacembelus_armatus
MGP_SPRETEiJ_G0022828	Thumpd2	85	41.854	ENSMZEG00005027354	-	73	41.713	Maylandia_zebra
MGP_SPRETEiJ_G0022828	Thumpd2	91	48.946	ENSMGAG00000007605	THUMPD2	99	50.208	Meleagris_gallopavo
MGP_SPRETEiJ_G0022828	Thumpd2	99	76.181	ENSMAUG00000012866	Thumpd2	99	76.181	Mesocricetus_auratus
MGP_SPRETEiJ_G0022828	Thumpd2	92	67.894	ENSMICG00000008042	THUMPD2	100	66.667	Microcebus_murinus
MGP_SPRETEiJ_G0022828	Thumpd2	99	76.560	ENSMOCG00000018094	Thumpd2	99	76.560	Microtus_ochrogaster
MGP_SPRETEiJ_G0022828	Thumpd2	68	42.029	ENSMMOG00000007356	thumpd2	89	42.029	Mola_mola
MGP_SPRETEiJ_G0022828	Thumpd2	90	56.190	ENSMODG00000009129	THUMPD2	100	56.989	Monodelphis_domestica
MGP_SPRETEiJ_G0022828	Thumpd2	68	38.095	ENSMALG00000020471	thumpd2	97	38.340	Monopterus_albus
MGP_SPRETEiJ_G0022828	Thumpd2	100	95.644	MGP_CAROLIEiJ_G0021912	Thumpd2	100	95.644	Mus_caroli
MGP_SPRETEiJ_G0022828	Thumpd2	100	97.348	ENSMUSG00000024246	Thumpd2	100	97.348	Mus_musculus
MGP_SPRETEiJ_G0022828	Thumpd2	100	91.856	MGP_PahariEiJ_G0020902	Thumpd2	100	91.856	Mus_pahari
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.460	ENSMPUG00000010563	THUMPD2	99	67.460	Mustela_putorius_furo
MGP_SPRETEiJ_G0022828	Thumpd2	94	64.352	ENSMLUG00000009688	THUMPD2	100	67.230	Myotis_lucifugus
MGP_SPRETEiJ_G0022828	Thumpd2	96	72.441	ENSNGAG00000016396	Thumpd2	99	72.441	Nannospalax_galili
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.659	ENSNLEG00000016562	THUMPD2	100	67.659	Nomascus_leucogenys
MGP_SPRETEiJ_G0022828	Thumpd2	89	53.165	ENSMEUG00000014815	THUMPD2	99	53.165	Notamacropus_eugenii
MGP_SPRETEiJ_G0022828	Thumpd2	90	55.048	ENSOPRG00000013478	THUMPD2	99	56.616	Ochotona_princeps
MGP_SPRETEiJ_G0022828	Thumpd2	76	39.623	ENSONIG00000001165	thumpd2	95	38.795	Oreochromis_niloticus
MGP_SPRETEiJ_G0022828	Thumpd2	68	55.096	ENSOANG00000004028	-	97	55.096	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0022828	Thumpd2	95	65.089	ENSOCUG00000003257	THUMPD2	100	68.579	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0022828	Thumpd2	93	36.542	ENSORLG00000002138	thumpd2	99	36.542	Oryzias_latipes
MGP_SPRETEiJ_G0022828	Thumpd2	85	37.561	ENSORLG00020018792	thumpd2	94	37.561	Oryzias_latipes_hni
MGP_SPRETEiJ_G0022828	Thumpd2	91	36.660	ENSORLG00015005237	thumpd2	97	36.660	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0022828	Thumpd2	92	33.207	ENSOMEG00000023563	thumpd2	98	33.207	Oryzias_melastigma
MGP_SPRETEiJ_G0022828	Thumpd2	90	64.078	ENSOGAG00000010890	THUMPD2	99	65.208	Otolemur_garnettii
MGP_SPRETEiJ_G0022828	Thumpd2	95	61.057	ENSOARG00000007841	THUMPD2	99	61.057	Ovis_aries
MGP_SPRETEiJ_G0022828	Thumpd2	92	68.916	ENSPPAG00000033850	THUMPD2	99	68.916	Pan_paniscus
MGP_SPRETEiJ_G0022828	Thumpd2	95	66.998	ENSPPRG00000003874	THUMPD2	100	67.460	Panthera_pardus
MGP_SPRETEiJ_G0022828	Thumpd2	94	62.731	ENSPTIG00000004118	THUMPD2	96	66.234	Panthera_tigris_altaica
MGP_SPRETEiJ_G0022828	Thumpd2	95	68.651	ENSPTRG00000011860	THUMPD2	100	68.651	Pan_troglodytes
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.262	ENSPANG00000004807	THUMPD2	100	67.262	Papio_anubis
MGP_SPRETEiJ_G0022828	Thumpd2	91	37.988	ENSPKIG00000022207	THUMPD2	89	37.988	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0022828	Thumpd2	91	50.704	ENSPSIG00000003159	THUMPD2	99	52.026	Pelodiscus_sinensis
MGP_SPRETEiJ_G0022828	Thumpd2	100	77.213	ENSPEMG00000009015	Thumpd2	100	77.213	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0022828	Thumpd2	72	40.050	ENSPMAG00000006922	thumpd2	99	40.050	Petromyzon_marinus
MGP_SPRETEiJ_G0022828	Thumpd2	94	52.800	ENSPCIG00000022621	THUMPD2	96	52.800	Phascolarctos_cinereus
MGP_SPRETEiJ_G0022828	Thumpd2	91	36.417	ENSPFOG00000006461	thumpd2	96	36.542	Poecilia_formosa
MGP_SPRETEiJ_G0022828	Thumpd2	68	44.928	ENSPLAG00000010700	THUMPD2	81	44.928	Poecilia_latipinna
MGP_SPRETEiJ_G0022828	Thumpd2	68	44.928	ENSPMEG00000009573	-	94	36.952	Poecilia_mexicana
MGP_SPRETEiJ_G0022828	Thumpd2	68	44.928	ENSPREG00000001603	THUMPD2	86	44.928	Poecilia_reticulata
MGP_SPRETEiJ_G0022828	Thumpd2	89	67.158	ENSPPYG00000012470	THUMPD2	100	67.158	Pongo_abelii
MGP_SPRETEiJ_G0022828	Thumpd2	87	54.545	ENSPCAG00000007326	THUMPD2	99	54.545	Procavia_capensis
MGP_SPRETEiJ_G0022828	Thumpd2	95	55.754	ENSPCOG00000028456	-	100	55.754	Propithecus_coquereli
MGP_SPRETEiJ_G0022828	Thumpd2	92	69.530	ENSPCOG00000000396	-	100	68.515	Propithecus_coquereli
MGP_SPRETEiJ_G0022828	Thumpd2	94	61.806	ENSPVAG00000008101	THUMPD2	100	65.116	Pteropus_vampyrus
MGP_SPRETEiJ_G0022828	Thumpd2	93	33.136	ENSPNYG00000009804	THUMPD2	97	33.465	Pundamilia_nyererei
MGP_SPRETEiJ_G0022828	Thumpd2	92	37.022	ENSPNAG00000023224	thumpd2	98	37.022	Pygocentrus_nattereri
MGP_SPRETEiJ_G0022828	Thumpd2	100	83.365	ENSRNOG00000008291	Thumpd2	96	83.365	Rattus_norvegicus
MGP_SPRETEiJ_G0022828	Thumpd2	95	61.630	ENSRBIG00000034978	THUMPD2	100	61.630	Rhinopithecus_bieti
MGP_SPRETEiJ_G0022828	Thumpd2	89	67.230	ENSRROG00000031707	THUMPD2	100	67.230	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0022828	Thumpd2	95	67.857	ENSSBOG00000015419	THUMPD2	100	67.857	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0022828	Thumpd2	89	56.211	ENSSHAG00000010785	THUMPD2	99	56.211	Sarcophilus_harrisii
MGP_SPRETEiJ_G0022828	Thumpd2	63	55.224	ENSSFOG00015006959	THUMPD2	88	55.224	Scleropages_formosus
MGP_SPRETEiJ_G0022828	Thumpd2	50	54.902	ENSSMAG00000019604	-	55	54.902	Scophthalmus_maximus
MGP_SPRETEiJ_G0022828	Thumpd2	77	40.557	ENSSDUG00000019898	THUMPD2	79	40.557	Seriola_dumerili
MGP_SPRETEiJ_G0022828	Thumpd2	60	52.153	ENSSLDG00000016788	-	53	52.153	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0022828	Thumpd2	65	31.250	ENSSARG00000002239	THUMPD3	70	31.250	Sorex_araneus
MGP_SPRETEiJ_G0022828	Thumpd2	89	51.551	ENSSPUG00000006316	THUMPD2	97	51.551	Sphenodon_punctatus
MGP_SPRETEiJ_G0022828	Thumpd2	95	64.881	ENSSSCG00000008470	THUMPD2	99	65.079	Sus_scrofa
MGP_SPRETEiJ_G0022828	Thumpd2	73	52.174	ENSTGUG00000012782	THUMPD2	100	52.174	Taeniopygia_guttata
MGP_SPRETEiJ_G0022828	Thumpd2	91	34.436	ENSTRUG00000022712	THUMPD2	97	34.436	Takifugu_rubripes
MGP_SPRETEiJ_G0022828	Thumpd2	51	34.432	ENSTNIG00000009817	-	100	34.432	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0022828	Thumpd2	59	53.650	ENSTBEG00000008269	-	59	53.650	Tupaia_belangeri
MGP_SPRETEiJ_G0022828	Thumpd2	89	67.373	ENSTTRG00000005603	THUMPD2	99	67.373	Tursiops_truncatus
MGP_SPRETEiJ_G0022828	Thumpd2	94	67.269	ENSUAMG00000011048	THUMPD2	96	67.269	Ursus_americanus
MGP_SPRETEiJ_G0022828	Thumpd2	94	60.046	ENSUMAG00000013316	THUMPD2	96	63.067	Ursus_maritimus
MGP_SPRETEiJ_G0022828	Thumpd2	80	66.197	ENSVPAG00000007570	THUMPD2	86	66.197	Vicugna_pacos
MGP_SPRETEiJ_G0022828	Thumpd2	91	64.678	ENSVVUG00000018628	THUMPD2	100	66.456	Vulpes_vulpes
MGP_SPRETEiJ_G0022828	Thumpd2	92	43.408	ENSXETG00000018494	thumpd2	99	43.408	Xenopus_tropicalis
MGP_SPRETEiJ_G0022828	Thumpd2	71	44.138	ENSXCOG00000013456	-	90	44.138	Xiphophorus_couchianus
MGP_SPRETEiJ_G0022828	Thumpd2	91	36.468	ENSXMAG00000017249	thumpd2	96	36.468	Xiphophorus_maculatus