EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022843 (Gene tree)
Gene ID: -
Gene Symbol: Lrpprc
Alias: 3110001K13Rik|Lrp130
Full Name: leucine-rich PPR-motif containing
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 86414 bases
Position: chr17:83789581-83875994
Accession: 1919666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0047676	PPR	PF01535.20	2.2e-23	1	3
MGP_SPRETEiJ_P0047676	PPR	PF01535.20	2.2e-23	2	3
MGP_SPRETEiJ_P0047676	PPR	PF01535.20	2.2e-23	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0047682	-	967	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0047680	-	2674	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0047681	-	3983	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0047677	-	809	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0047676	-	4411	-	MGP_SPRETEiJ_P0047676	1392 (aa)	-	-
MGP_SPRETEiJ_T0047679	-	541	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0047678	-	565	-	MGP_SPRETEiJ_P0047678	141 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0022843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022843	Lrpprc	100	75.251	ENSG00000138095	LRPPRC	100	75.251	Homo_sapiens
MGP_SPRETEiJ_G0022843	Lrpprc	94	58.175	ENSAPLG00000008902	LRPPRC	99	58.175	Anas_platyrhynchos
MGP_SPRETEiJ_G0022843	Lrpprc	99	77.116	ENSBTAG00000016368	LRPPRC	99	76.813	Bos_taurus
MGP_SPRETEiJ_G0022843	Lrpprc	99	76.454	ENSCAFG00000002527	LRPPRC	99	76.238	Canis_familiaris
MGP_SPRETEiJ_G0022843	Lrpprc	99	75.664	ENSCAFG00020025995	LRPPRC	99	75.449	Canis_lupus_dingo
MGP_SPRETEiJ_G0022843	Lrpprc	96	78.630	ENSTSYG00000013197	LRPPRC	96	78.630	Carlito_syrichta
MGP_SPRETEiJ_G0022843	Lrpprc	100	62.607	ENSCPBG00000005446	LRPPRC	99	63.717	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0022843	Lrpprc	67	32.851	FBgn0284256	bsf	68	32.851	Drosophila_melanogaster
MGP_SPRETEiJ_G0022843	Lrpprc	99	79.340	ENSEASG00005003715	LRPPRC	99	79.197	Equus_asinus_asinus
MGP_SPRETEiJ_G0022843	Lrpprc	99	78.484	ENSECAG00000023814	LRPPRC	96	78.339	Equus_caballus
MGP_SPRETEiJ_G0022843	Lrpprc	96	56.357	ENSGALG00000009967	LRPPRC	99	55.734	Gallus_gallus
MGP_SPRETEiJ_G0022843	Lrpprc	97	63.950	ENSGAGG00000020227	LRPPRC	99	62.837	Gopherus_agassizii
MGP_SPRETEiJ_G0022843	Lrpprc	100	75.536	ENSMLEG00000043673	LRPPRC	100	75.536	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0022843	Lrpprc	96	56.347	ENSMGAG00000010201	LRPPRC	99	56.749	Meleagris_gallopavo
MGP_SPRETEiJ_G0022843	Lrpprc	100	95.402	MGP_CAROLIEiJ_G0021927	Lrpprc	100	95.402	Mus_caroli
MGP_SPRETEiJ_G0022843	Lrpprc	100	98.491	ENSMUSG00000024120	Lrpprc	100	98.491	Mus_musculus
MGP_SPRETEiJ_G0022843	Lrpprc	100	93.750	MGP_PahariEiJ_G0020917	Lrpprc	100	93.750	Mus_pahari
MGP_SPRETEiJ_G0022843	Lrpprc	81	77.500	ENSMEUG00000004430	-	89	77.500	Notamacropus_eugenii
MGP_SPRETEiJ_G0022843	Lrpprc	100	84.195	ENSPEMG00000022720	Lrpprc	100	84.195	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0022843	Lrpprc	100	66.240	ENSPCIG00000006872	LRPPRC	100	66.098	Phascolarctos_cinereus
MGP_SPRETEiJ_G0022843	Lrpprc	99	76.631	ENSPCOG00000001309	LRPPRC	99	76.542	Propithecus_coquereli
MGP_SPRETEiJ_G0022843	Lrpprc	89	60.096	ENSSPUG00000005188	LRPPRC	99	59.936	Sphenodon_punctatus
MGP_SPRETEiJ_G0022843	Lrpprc	66	75.566	ENSTBEG00000011055	-	66	75.566	Tupaia_belangeri
MGP_SPRETEiJ_G0022843	Lrpprc	100	76.918	ENSUAMG00000022940	LRPPRC	100	76.918	Ursus_americanus
MGP_SPRETEiJ_G0022843	Lrpprc	100	76.989	ENSUMAG00000012801	LRPPRC	100	76.989	Ursus_maritimus
MGP_SPRETEiJ_G0022843	Lrpprc	99	75.449	ENSVVUG00000002339	LRPPRC	99	75.612	Vulpes_vulpes