EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022850 (Gene tree)
Gene ID: -
Gene Symbol: Srbd1
Alias: D530025C17Rik
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 164970 bases
Position: chr17:85133347-85298316
Accession: 1925836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0047697	S1	PF00575.23	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0047697	-	3530	-	MGP_SPRETEiJ_P0047697	981 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0022850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022850	Srbd1	100	82.010	ENSG00000068784	SRBD1	100	82.010	Homo_sapiens
MGP_SPRETEiJ_G0022850	Srbd1	85	56.941	ENSAPOG00000005103	si:ch211-117n7.8	84	57.075	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.596	ENSAMEG00000005993	SRBD1	100	82.596	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0022850	Srbd1	91	54.515	ENSACIG00000009875	si:ch211-117n7.8	91	54.874	Amphilophus_citrinellus
MGP_SPRETEiJ_G0022850	Srbd1	85	56.941	ENSAOCG00000024718	si:ch211-117n7.8	85	56.789	Amphiprion_ocellaris
MGP_SPRETEiJ_G0022850	Srbd1	85	57.025	ENSAPEG00000002645	si:ch211-117n7.8	88	57.025	Amphiprion_percula
MGP_SPRETEiJ_G0022850	Srbd1	85	57.109	ENSATEG00000010844	si:ch211-117n7.8	85	57.109	Anabas_testudineus
MGP_SPRETEiJ_G0022850	Srbd1	96	71.206	ENSAPLG00000006313	SRBD1	100	69.950	Anas_platyrhynchos
MGP_SPRETEiJ_G0022850	Srbd1	100	82.211	ENSANAG00000025573	SRBD1	100	82.211	Aotus_nancymaae
MGP_SPRETEiJ_G0022850	Srbd1	96	52.401	ENSACLG00000024219	si:ch211-117n7.8	92	52.401	Astatotilapia_calliptera
MGP_SPRETEiJ_G0022850	Srbd1	85	60.617	ENSAMXG00000004294	SRBD1	93	56.105	Astyanax_mexicanus
MGP_SPRETEiJ_G0022850	Srbd1	100	80.723	ENSBTAG00000007508	SRBD1	97	81.426	Bos_taurus
MGP_SPRETEiJ_G0022850	Srbd1	100	81.407	ENSCJAG00000000727	SRBD1	100	81.407	Callithrix_jacchus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.949	ENSCAFG00000002554	SRBD1	100	82.949	Canis_familiaris
MGP_SPRETEiJ_G0022850	Srbd1	100	80.020	ENSCAFG00020026284	SRBD1	99	86.768	Canis_lupus_dingo
MGP_SPRETEiJ_G0022850	Srbd1	100	80.622	ENSCHIG00000016535	SRBD1	98	81.325	Capra_hircus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.583	ENSTSYG00000012797	SRBD1	100	82.583	Carlito_syrichta
MGP_SPRETEiJ_G0022850	Srbd1	100	83.028	ENSCPOG00000004773	SRBD1	100	83.028	Cavia_porcellus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.412	ENSCCAG00000025589	SRBD1	100	82.412	Cebus_capucinus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.613	ENSCATG00000039530	SRBD1	100	82.613	Cercocebus_atys
MGP_SPRETEiJ_G0022850	Srbd1	100	83.688	ENSCLAG00000008623	SRBD1	100	83.688	Chinchilla_lanigera
MGP_SPRETEiJ_G0022850	Srbd1	100	82.613	ENSCSAG00000013350	SRBD1	100	82.613	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0022850	Srbd1	87	92.157	ENSCHOG00000003805	SRBD1	87	92.157	Choloepus_hoffmanni
MGP_SPRETEiJ_G0022850	Srbd1	96	72.603	ENSCPBG00000005677	SRBD1	100	71.573	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0022850	Srbd1	79	43.456	ENSCING00000005950	-	99	43.456	Ciona_intestinalis
MGP_SPRETEiJ_G0022850	Srbd1	80	43.822	ENSCSAVG00000000861	-	99	43.822	Ciona_savignyi
MGP_SPRETEiJ_G0022850	Srbd1	99	82.175	ENSCANG00000016307	SRBD1	99	82.175	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0022850	Srbd1	100	89.013	ENSCGRG00001000513	Srbd1	100	89.013	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0022850	Srbd1	100	89.013	ENSCGRG00000002283	Srbd1	100	89.013	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0022850	Srbd1	85	55.920	ENSCSEG00000000856	si:ch211-117n7.8	85	56.038	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0022850	Srbd1	85	57.160	ENSCVAG00000020212	si:ch211-117n7.8	95	55.506	Cyprinodon_variegatus
MGP_SPRETEiJ_G0022850	Srbd1	100	81.800	ENSDNOG00000018686	SRBD1	100	81.800	Dasypus_novemcinctus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.012	ENSDORG00000010468	Srbd1	100	82.012	Dipodomys_ordii
MGP_SPRETEiJ_G0022850	Srbd1	79	37.218	FBgn0051156	CG31156	79	37.469	Drosophila_melanogaster
MGP_SPRETEiJ_G0022850	Srbd1	89	80.036	ENSETEG00000000739	SRBD1	92	80.651	Echinops_telfairi
MGP_SPRETEiJ_G0022850	Srbd1	73	48.493	ENSEBUG00000008902	si:ch211-117n7.8	96	48.493	Eptatretus_burgeri
MGP_SPRETEiJ_G0022850	Srbd1	100	80.120	ENSEASG00005003132	SRBD1	97	86.624	Equus_asinus_asinus
MGP_SPRETEiJ_G0022850	Srbd1	100	83.233	ENSECAG00000013865	SRBD1	98	83.233	Equus_caballus
MGP_SPRETEiJ_G0022850	Srbd1	86	60.000	ENSELUG00000012592	si:ch211-117n7.8	82	60.000	Esox_lucius
MGP_SPRETEiJ_G0022850	Srbd1	100	82.831	ENSFCAG00000005101	SRBD1	100	82.831	Felis_catus
MGP_SPRETEiJ_G0022850	Srbd1	93	70.684	ENSFALG00000012966	SRBD1	100	67.984	Ficedula_albicollis
MGP_SPRETEiJ_G0022850	Srbd1	98	83.750	ENSFDAG00000016670	SRBD1	99	83.750	Fukomys_damarensis
MGP_SPRETEiJ_G0022850	Srbd1	84	57.788	ENSFHEG00000019480	si:ch211-117n7.8	82	57.788	Fundulus_heteroclitus
MGP_SPRETEiJ_G0022850	Srbd1	50	53.793	ENSGMOG00000018010	-	100	53.793	Gadus_morhua
MGP_SPRETEiJ_G0022850	Srbd1	87	75.086	ENSGALG00000009990	SRBD1	100	69.138	Gallus_gallus
MGP_SPRETEiJ_G0022850	Srbd1	85	56.992	ENSGAFG00000019664	si:ch211-117n7.8	84	56.992	Gambusia_affinis
MGP_SPRETEiJ_G0022850	Srbd1	62	59.680	ENSGACG00000010794	si:ch211-117n7.8	100	59.680	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0022850	Srbd1	84	79.447	ENSGAGG00000006166	SRBD1	99	79.447	Gopherus_agassizii
MGP_SPRETEiJ_G0022850	Srbd1	97	83.075	ENSGGOG00000005910	SRBD1	100	83.058	Gorilla_gorilla
MGP_SPRETEiJ_G0022850	Srbd1	91	48.546	ENSHBUG00000013207	si:ch211-117n7.8	99	46.138	Haplochromis_burtoni
MGP_SPRETEiJ_G0022850	Srbd1	99	84.012	ENSHGLG00000018153	-	99	84.012	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0022850	Srbd1	99	83.809	ENSHGLG00100015183	-	99	83.809	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0022850	Srbd1	85	60.000	ENSIPUG00000009661	srbd1	96	54.049	Ictalurus_punctatus
MGP_SPRETEiJ_G0022850	Srbd1	100	84.654	ENSSTOG00000005898	SRBD1	100	84.654	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0022850	Srbd1	100	79.310	ENSJJAG00000022244	Srbd1	100	79.310	Jaculus_jaculus
MGP_SPRETEiJ_G0022850	Srbd1	99	50.546	ENSKMAG00000003473	si:ch211-117n7.8	99	50.546	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0022850	Srbd1	99	50.389	ENSLBEG00000027518	si:ch211-117n7.8	99	50.389	Labrus_bergylta
MGP_SPRETEiJ_G0022850	Srbd1	85	69.787	ENSLACG00000009790	SRBD1	99	69.787	Latimeria_chalumnae
MGP_SPRETEiJ_G0022850	Srbd1	95	59.372	ENSLOCG00000016360	si:ch211-117n7.8	99	57.143	Lepisosteus_oculatus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.613	ENSMFAG00000042026	SRBD1	100	82.613	Macaca_fascicularis
MGP_SPRETEiJ_G0022850	Srbd1	100	82.513	ENSMMUG00000003490	SRBD1	100	82.513	Macaca_mulatta
MGP_SPRETEiJ_G0022850	Srbd1	100	80.101	ENSMNEG00000034701	SRBD1	100	80.101	Macaca_nemestrina
MGP_SPRETEiJ_G0022850	Srbd1	100	82.613	ENSMLEG00000000745	SRBD1	100	82.613	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0022850	Srbd1	99	50.448	ENSMAMG00000021921	si:ch211-117n7.8	99	50.746	Mastacembelus_armatus
MGP_SPRETEiJ_G0022850	Srbd1	96	52.401	ENSMZEG00005027369	si:ch211-117n7.8	92	52.401	Maylandia_zebra
MGP_SPRETEiJ_G0022850	Srbd1	80	74.246	ENSMGAG00000010273	SRBD1	99	74.246	Meleagris_gallopavo
MGP_SPRETEiJ_G0022850	Srbd1	79	88.806	ENSMAUG00000013916	Srbd1	95	88.806	Mesocricetus_auratus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.831	ENSMICG00000007835	SRBD1	100	82.831	Microcebus_murinus
MGP_SPRETEiJ_G0022850	Srbd1	100	88.911	ENSMOCG00000018716	Srbd1	100	88.911	Microtus_ochrogaster
MGP_SPRETEiJ_G0022850	Srbd1	97	51.696	ENSMMOG00000007507	si:ch211-117n7.8	99	51.696	Mola_mola
MGP_SPRETEiJ_G0022850	Srbd1	98	51.093	ENSMALG00000001562	si:ch211-117n7.8	98	51.093	Monopterus_albus
MGP_SPRETEiJ_G0022850	Srbd1	100	98.777	MGP_CAROLIEiJ_G0021934	Srbd1	100	98.777	Mus_caroli
MGP_SPRETEiJ_G0022850	Srbd1	100	99.083	ENSMUSG00000024135	Srbd1	100	99.083	Mus_musculus
MGP_SPRETEiJ_G0022850	Srbd1	100	96.432	MGP_PahariEiJ_G0020924	Srbd1	100	96.432	Mus_pahari
MGP_SPRETEiJ_G0022850	Srbd1	100	80.642	ENSMLUG00000007039	SRBD1	100	80.642	Myotis_lucifugus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.823	ENSNGAG00000011893	Srbd1	100	82.823	Nannospalax_galili
MGP_SPRETEiJ_G0022850	Srbd1	91	53.838	ENSNBRG00000012873	si:ch211-117n7.8	99	50.966	Neolamprologus_brichardi
MGP_SPRETEiJ_G0022850	Srbd1	100	82.211	ENSNLEG00000016877	SRBD1	100	82.211	Nomascus_leucogenys
MGP_SPRETEiJ_G0022850	Srbd1	100	82.030	ENSODEG00000012095	SRBD1	100	82.030	Octodon_degus
MGP_SPRETEiJ_G0022850	Srbd1	96	52.242	ENSONIG00000000945	si:ch211-117n7.8	100	57.623	Oreochromis_niloticus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.964	ENSOCUG00000015385	SRBD1	100	83.569	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0022850	Srbd1	85	53.023	ENSORLG00000004427	si:ch211-117n7.8	83	53.023	Oryzias_latipes
MGP_SPRETEiJ_G0022850	Srbd1	85	55.981	ENSORLG00020012792	si:ch211-117n7.8	84	56.098	Oryzias_latipes_hni
MGP_SPRETEiJ_G0022850	Srbd1	85	55.814	ENSORLG00015018598	si:ch211-117n7.8	84	55.814	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0022850	Srbd1	85	55.399	ENSOMEG00000012229	si:ch211-117n7.8	83	55.516	Oryzias_melastigma
MGP_SPRETEiJ_G0022850	Srbd1	100	77.912	ENSOGAG00000001076	SRBD1	100	77.912	Otolemur_garnettii
MGP_SPRETEiJ_G0022850	Srbd1	100	76.431	ENSOARG00000005958	SRBD1	100	77.110	Ovis_aries
MGP_SPRETEiJ_G0022850	Srbd1	100	82.412	ENSPPAG00000038442	SRBD1	100	82.412	Pan_paniscus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.814	ENSPPRG00000003449	SRBD1	100	82.814	Panthera_pardus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.915	ENSPTIG00000012495	SRBD1	100	82.915	Panthera_tigris_altaica
MGP_SPRETEiJ_G0022850	Srbd1	100	82.412	ENSPTRG00000011889	SRBD1	100	82.412	Pan_troglodytes
MGP_SPRETEiJ_G0022850	Srbd1	100	82.312	ENSPANG00000008063	SRBD1	100	82.312	Papio_anubis
MGP_SPRETEiJ_G0022850	Srbd1	86	59.408	ENSPKIG00000021973	si:ch211-117n7.8	98	54.564	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0022850	Srbd1	100	71.903	ENSPSIG00000008992	SRBD1	100	72.077	Pelodiscus_sinensis
MGP_SPRETEiJ_G0022850	Srbd1	87	53.639	ENSPMGG00000013348	si:ch211-117n7.8	99	51.210	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0022850	Srbd1	100	87.674	ENSPEMG00000020684	Srbd1	100	87.674	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0022850	Srbd1	84	57.109	ENSPFOG00000010650	si:ch211-117n7.8	83	57.109	Poecilia_formosa
MGP_SPRETEiJ_G0022850	Srbd1	85	57.227	ENSPLAG00000002141	si:ch211-117n7.8	84	57.227	Poecilia_latipinna
MGP_SPRETEiJ_G0022850	Srbd1	84	57.227	ENSPMEG00000018537	si:ch211-117n7.8	83	57.227	Poecilia_mexicana
MGP_SPRETEiJ_G0022850	Srbd1	85	56.557	ENSPREG00000003258	si:ch211-117n7.8	86	56.557	Poecilia_reticulata
MGP_SPRETEiJ_G0022850	Srbd1	100	72.538	ENSPPYG00000012444	SRBD1	99	72.538	Pongo_abelii
MGP_SPRETEiJ_G0022850	Srbd1	82	79.384	ENSPCAG00000005629	SRBD1	86	79.384	Procavia_capensis
MGP_SPRETEiJ_G0022850	Srbd1	100	70.612	ENSPCOG00000017669	SRBD1	100	70.612	Propithecus_coquereli
MGP_SPRETEiJ_G0022850	Srbd1	100	72.462	ENSPVAG00000001782	SRBD1	100	72.462	Pteropus_vampyrus
MGP_SPRETEiJ_G0022850	Srbd1	91	52.392	ENSPNYG00000000508	si:ch211-117n7.8	99	49.693	Pundamilia_nyererei
MGP_SPRETEiJ_G0022850	Srbd1	95	57.082	ENSPNAG00000013492	SRBD1	93	57.356	Pygocentrus_nattereri
MGP_SPRETEiJ_G0022850	Srbd1	100	93.890	ENSRNOG00000014720	Srbd1	99	93.890	Rattus_norvegicus
MGP_SPRETEiJ_G0022850	Srbd1	99	82.175	ENSRBIG00000033486	SRBD1	99	82.175	Rhinopithecus_bieti
MGP_SPRETEiJ_G0022850	Srbd1	99	82.175	ENSRROG00000041599	SRBD1	99	82.175	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0022850	Srbd1	100	82.010	ENSSBOG00000024982	SRBD1	100	82.010	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0022850	Srbd1	89	56.618	ENSSFOG00015001128	si:ch211-117n7.8	97	56.618	Scleropages_formosus
MGP_SPRETEiJ_G0022850	Srbd1	85	56.404	ENSSMAG00000018256	si:ch211-117n7.8	83	56.690	Scophthalmus_maximus
MGP_SPRETEiJ_G0022850	Srbd1	84	55.934	ENSSLDG00000023189	si:ch211-117n7.8	83	55.934	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0022850	Srbd1	100	75.254	ENSSARG00000009740	SRBD1	100	75.254	Sorex_araneus
MGP_SPRETEiJ_G0022850	Srbd1	88	74.942	ENSSPUG00000010475	SRBD1	99	73.761	Sphenodon_punctatus
MGP_SPRETEiJ_G0022850	Srbd1	86	54.325	ENSSPAG00000008092	-	99	48.959	Stegastes_partitus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.631	ENSSSCG00000008445	SRBD1	98	82.731	Sus_scrofa
MGP_SPRETEiJ_G0022850	Srbd1	84	75.904	ENSTGUG00000003878	SRBD1	100	75.904	Taeniopygia_guttata
MGP_SPRETEiJ_G0022850	Srbd1	97	51.889	ENSTRUG00000007080	si:ch211-117n7.8	93	56.773	Takifugu_rubripes
MGP_SPRETEiJ_G0022850	Srbd1	98	50.745	ENSTNIG00000007464	si:ch211-117n7.8	97	50.745	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0022850	Srbd1	82	95.745	ENSTBEG00000004556	SRBD1	82	95.745	Tupaia_belangeri
MGP_SPRETEiJ_G0022850	Srbd1	94	81.476	ENSTTRG00000011871	SRBD1	94	82.451	Tursiops_truncatus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.229	ENSUAMG00000008126	SRBD1	100	80.769	Ursus_americanus
MGP_SPRETEiJ_G0022850	Srbd1	100	82.329	ENSUMAG00000012902	SRBD1	98	82.329	Ursus_maritimus
MGP_SPRETEiJ_G0022850	Srbd1	90	84.684	ENSVPAG00000006825	SRBD1	99	84.684	Vicugna_pacos
MGP_SPRETEiJ_G0022850	Srbd1	100	82.430	ENSVVUG00000005389	SRBD1	100	82.932	Vulpes_vulpes
MGP_SPRETEiJ_G0022850	Srbd1	100	50.963	ENSXETG00000002760	srbd1	100	51.884	Xenopus_tropicalis
MGP_SPRETEiJ_G0022850	Srbd1	85	57.109	ENSXMAG00000016861	si:ch211-117n7.8	84	57.109	Xiphophorus_maculatus