EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022969 (Gene tree)
Gene ID: -
Gene Symbol: Celf4
Alias: A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik
Full Name: CUGBP%2C Elav-like family member 4
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 294906 bases
Position: chr18:23265628-23560533
Accession: 1932407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0048130	RRM_1	PF00076.22	7.4e-53	1	3
MGP_SPRETEiJ_P0048130	RRM_1	PF00076.22	7.4e-53	2	3
MGP_SPRETEiJ_P0048130	RRM_1	PF00076.22	7.4e-53	3	3
MGP_SPRETEiJ_P0048129	RRM_1	PF00076.22	6.3e-43	1	3
MGP_SPRETEiJ_P0048129	RRM_1	PF00076.22	6.3e-43	2	3
MGP_SPRETEiJ_P0048129	RRM_1	PF00076.22	6.3e-43	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0048130	-	3935	-	MGP_SPRETEiJ_P0048130	504 (aa)	-	UPI0000171B92
MGP_SPRETEiJ_T0048128	-	3225	-	MGP_SPRETEiJ_P0048128	362 (aa)	-	UPI000B4F9091
MGP_SPRETEiJ_T0048129	-	3875	-	MGP_SPRETEiJ_P0048129	484 (aa)	-	UPI000024DC4C
MGP_SPRETEiJ_T0048127	-	3498	-	MGP_SPRETEiJ_P0048127	453 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0022969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022969's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0022969	Celf4	100	41.787	MGP_SPRETEiJ_G0024079	Celf2	90	55.556
MGP_SPRETEiJ_G0022969	Celf4	62	36.842	MGP_SPRETEiJ_G0021962	Pabpc6	62	36.842
MGP_SPRETEiJ_G0022969	Celf4	100	62.236	MGP_SPRETEiJ_G0033445	Celf6	97	68.783
MGP_SPRETEiJ_G0022969	Celf4	73	36.232	MGP_SPRETEiJ_G0031906	Elavl1	95	43.210
MGP_SPRETEiJ_G0022969	Celf4	68	40.789	MGP_SPRETEiJ_G0033930	Rbms3	72	40.789
MGP_SPRETEiJ_G0022969	Celf4	100	63.433	MGP_SPRETEiJ_G0026256	Celf3	100	69.072
MGP_SPRETEiJ_G0022969	Celf4	100	42.231	MGP_SPRETEiJ_G0024859	Celf1	100	45.000
MGP_SPRETEiJ_G0022969	Celf4	91	37.037	MGP_SPRETEiJ_G0027124	Elavl2	88	39.506
MGP_SPRETEiJ_G0022969	Celf4	91	35.802	MGP_SPRETEiJ_G0027258	Elavl4	88	38.272
MGP_SPRETEiJ_G0022969	Celf4	63	30.682	MGP_SPRETEiJ_G0029606	Tia1	87	32.911
MGP_SPRETEiJ_G0022969	Celf4	52	37.500	MGP_SPRETEiJ_G0024508	Rbms1	52	37.500
MGP_SPRETEiJ_G0022969	Celf4	97	65.795	MGP_SPRETEiJ_G0016461	Celf5	93	76.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022969	Celf4	100	99.559	ENSG00000101489	CELF4	100	100.000	Homo_sapiens
MGP_SPRETEiJ_G0022969	Celf4	99	79.151	ENSAPOG00000002964	celf4	100	77.860	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0022969	Celf4	92	97.092	ENSAMEG00000017059	CELF4	100	97.315	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0022969	Celf4	100	77.681	ENSACIG00000018097	celf4	100	75.670	Amphilophus_citrinellus
MGP_SPRETEiJ_G0022969	Celf4	75	69.597	ENSAOCG00000019919	-	80	69.597	Amphiprion_ocellaris
MGP_SPRETEiJ_G0022969	Celf4	100	81.400	ENSAOCG00000020590	celf4	100	78.969	Amphiprion_ocellaris
MGP_SPRETEiJ_G0022969	Celf4	100	81.400	ENSAPEG00000002940	celf4	99	78.850	Amphiprion_percula
MGP_SPRETEiJ_G0022969	Celf4	100	81.182	ENSATEG00000023731	celf4	100	78.763	Anabas_testudineus
MGP_SPRETEiJ_G0022969	Celf4	92	85.676	ENSAPLG00000007830	-	100	85.676	Anas_platyrhynchos
MGP_SPRETEiJ_G0022969	Celf4	60	89.916	ENSACAG00000012428	CELF4	95	98.319	Anolis_carolinensis
MGP_SPRETEiJ_G0022969	Celf4	100	99.559	ENSANAG00000029499	CELF4	100	99.177	Aotus_nancymaae
MGP_SPRETEiJ_G0022969	Celf4	99	84.356	ENSACLG00000011828	celf4	100	83.564	Astatotilapia_calliptera
MGP_SPRETEiJ_G0022969	Celf4	100	81.798	ENSAMXG00000007935	celf4	100	79.055	Astyanax_mexicanus
MGP_SPRETEiJ_G0022969	Celf4	100	97.137	ENSBTAG00000004940	CELF4	99	100.000	Bos_taurus
MGP_SPRETEiJ_G0022969	Celf4	100	99.588	ENSCJAG00000021135	CELF4	100	99.588	Callithrix_jacchus
MGP_SPRETEiJ_G0022969	Celf4	100	97.137	ENSCHIG00000007169	CELF4	99	100.000	Capra_hircus
MGP_SPRETEiJ_G0022969	Celf4	100	99.449	ENSTSYG00000000816	CELF4	85	99.449	Carlito_syrichta
MGP_SPRETEiJ_G0022969	Celf4	100	94.643	ENSCPOG00000035956	CELF4	100	94.643	Cavia_porcellus
MGP_SPRETEiJ_G0022969	Celf4	100	99.559	ENSCCAG00000028373	CELF4	100	99.177	Cebus_capucinus
MGP_SPRETEiJ_G0022969	Celf4	100	99.588	ENSCATG00000045293	CELF4	100	99.588	Cercocebus_atys
MGP_SPRETEiJ_G0022969	Celf4	100	99.603	ENSCLAG00000008344	CELF4	100	99.603	Chinchilla_lanigera
MGP_SPRETEiJ_G0022969	Celf4	93	93.258	ENSCSAG00000017933	CELF4	99	99.153	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0022969	Celf4	93	98.214	ENSCPBG00000005237	CELF4	93	98.214	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0022969	Celf4	100	99.559	ENSCANG00000036735	CELF4	100	99.177	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0022969	Celf4	100	84.555	ENSCGRG00001018085	Celf4	89	89.610	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0022969	Celf4	99	79.151	ENSCSEG00000007074	celf4	99	92.857	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0022969	Celf4	100	81.758	ENSCVAG00000017617	celf4	100	79.346	Cyprinodon_variegatus
MGP_SPRETEiJ_G0022969	Celf4	99	78.860	ENSDARG00000070045	celf4	100	79.236	Danio_rerio
MGP_SPRETEiJ_G0022969	Celf4	96	90.323	ENSDNOG00000032492	CELF4	97	98.056	Dasypus_novemcinctus
MGP_SPRETEiJ_G0022969	Celf4	100	99.603	ENSDORG00000007169	Celf4	100	99.603	Dipodomys_ordii
MGP_SPRETEiJ_G0022969	Celf4	93	99.145	ENSETEG00000007432	-	74	98.658	Echinops_telfairi
MGP_SPRETEiJ_G0022969	Celf4	100	97.320	ENSEASG00005016534	CELF4	100	97.320	Equus_asinus_asinus
MGP_SPRETEiJ_G0022969	Celf4	100	99.588	ENSECAG00000008810	CELF4	100	99.588	Equus_caballus
MGP_SPRETEiJ_G0022969	Celf4	88	86.293	ENSEEUG00000003763	CELF4	100	78.829	Erinaceus_europaeus
MGP_SPRETEiJ_G0022969	Celf4	100	97.320	ENSFCAG00000045234	CELF4	100	97.320	Felis_catus
MGP_SPRETEiJ_G0022969	Celf4	93	92.416	ENSFALG00000009188	CELF4	99	97.759	Ficedula_albicollis
MGP_SPRETEiJ_G0022969	Celf4	100	94.048	ENSFDAG00000010287	CELF4	100	94.048	Fukomys_damarensis
MGP_SPRETEiJ_G0022969	Celf4	99	75.519	ENSFHEG00000003431	celf4	99	76.495	Fundulus_heteroclitus
MGP_SPRETEiJ_G0022969	Celf4	99	64.182	ENSGMOG00000008703	celf4	100	64.182	Gadus_morhua
MGP_SPRETEiJ_G0022969	Celf4	81	92.683	ENSGMOG00000011747	-	76	92.683	Gadus_morhua
MGP_SPRETEiJ_G0022969	Celf4	51	78.125	ENSGALG00000050344	-	75	86.861	Gallus_gallus
MGP_SPRETEiJ_G0022969	Celf4	99	79.159	ENSGAFG00000021515	celf4	99	76.268	Gambusia_affinis
MGP_SPRETEiJ_G0022969	Celf4	99	72.828	ENSGACG00000008752	celf4	100	72.643	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0022969	Celf4	100	62.663	ENSGAGG00000017672	-	99	62.556	Gopherus_agassizii
MGP_SPRETEiJ_G0022969	Celf4	81	97.611	ENSGAGG00000023014	-	98	97.611	Gopherus_agassizii
MGP_SPRETEiJ_G0022969	Celf4	100	99.559	ENSGGOG00000013920	CELF4	100	99.177	Gorilla_gorilla
MGP_SPRETEiJ_G0022969	Celf4	99	84.950	ENSHBUG00000021618	celf4	100	83.564	Haplochromis_burtoni
MGP_SPRETEiJ_G0022969	Celf4	100	99.587	ENSHGLG00000003130	CELF4	100	99.587	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0022969	Celf4	100	99.008	ENSHGLG00100006394	CELF4	100	99.008	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0022969	Celf4	100	80.568	ENSHCOG00000012195	celf4	100	77.710	Hippocampus_comes
MGP_SPRETEiJ_G0022969	Celf4	100	80.044	ENSIPUG00000010810	celf4	97	78.085	Ictalurus_punctatus
MGP_SPRETEiJ_G0022969	Celf4	100	98.810	ENSJJAG00000016892	Celf4	100	98.810	Jaculus_jaculus
MGP_SPRETEiJ_G0022969	Celf4	100	78.118	ENSKMAG00000019602	celf4	100	77.331	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0022969	Celf4	100	81.400	ENSLBEG00000000940	celf4	100	78.776	Labrus_bergylta
MGP_SPRETEiJ_G0022969	Celf4	99	69.231	ENSLOCG00000004792	celf4	99	74.217	Lepisosteus_oculatus
MGP_SPRETEiJ_G0022969	Celf4	100	99.405	ENSLAFG00000021352	CELF4	100	99.405	Loxodonta_africana
MGP_SPRETEiJ_G0022969	Celf4	100	99.559	ENSMFAG00000042983	CELF4	100	99.177	Macaca_fascicularis
MGP_SPRETEiJ_G0022969	Celf4	100	99.381	ENSMMUG00000006866	CELF4	100	99.381	Macaca_mulatta
MGP_SPRETEiJ_G0022969	Celf4	100	97.320	ENSMNEG00000033449	CELF4	100	97.320	Macaca_nemestrina
MGP_SPRETEiJ_G0022969	Celf4	89	95.975	ENSMLEG00000028543	CELF4	99	91.361	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0022969	Celf4	100	81.400	ENSMAMG00000018573	celf4	99	78.323	Mastacembelus_armatus
MGP_SPRETEiJ_G0022969	Celf4	100	78.118	ENSMZEG00005026879	celf4	100	75.869	Maylandia_zebra
MGP_SPRETEiJ_G0022969	Celf4	82	68.896	ENSMGAG00000017029	CELF4	99	71.111	Meleagris_gallopavo
MGP_SPRETEiJ_G0022969	Celf4	100	99.381	ENSMICG00000006984	CELF4	100	99.381	Microcebus_murinus
MGP_SPRETEiJ_G0022969	Celf4	100	99.802	ENSMOCG00000011985	Celf4	100	99.802	Microtus_ochrogaster
MGP_SPRETEiJ_G0022969	Celf4	100	80.744	ENSMMOG00000012281	celf4	100	78.004	Mola_mola
MGP_SPRETEiJ_G0022969	Celf4	90	87.572	ENSMODG00000000306	CELF4	91	88.439	Monodelphis_domestica
MGP_SPRETEiJ_G0022969	Celf4	100	83.438	ENSMALG00000001696	celf4	100	83.564	Monopterus_albus
MGP_SPRETEiJ_G0022969	Celf4	100	100.000	MGP_CAROLIEiJ_G0022058	Celf4	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0022969	Celf4	100	100.000	ENSMUSG00000024268	Celf4	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0022969	Celf4	100	100.000	MGP_PahariEiJ_G0018792	Celf4	100	100.000	Mus_pahari
MGP_SPRETEiJ_G0022969	Celf4	100	74.822	ENSMPUG00000001027	CELF4	100	81.295	Mustela_putorius_furo
MGP_SPRETEiJ_G0022969	Celf4	100	90.314	ENSMLUG00000001755	CELF4	100	94.226	Myotis_lucifugus
MGP_SPRETEiJ_G0022969	Celf4	100	99.603	ENSNGAG00000000761	Celf4	100	99.603	Nannospalax_galili
MGP_SPRETEiJ_G0022969	Celf4	100	78.118	ENSNBRG00000018194	celf4	100	75.869	Neolamprologus_brichardi
MGP_SPRETEiJ_G0022969	Celf4	81	94.898	ENSMEUG00000007202	-	100	87.931	Notamacropus_eugenii
MGP_SPRETEiJ_G0022969	Celf4	100	83.333	ENSOPRG00000014415	CELF4	100	84.156	Ochotona_princeps
MGP_SPRETEiJ_G0022969	Celf4	100	99.802	ENSODEG00000018464	CELF4	100	99.802	Octodon_degus
MGP_SPRETEiJ_G0022969	Celf4	100	87.419	ENSONIG00000019463	celf4	100	84.114	Oreochromis_niloticus
MGP_SPRETEiJ_G0022969	Celf4	92	96.847	ENSOCUG00000024790	CELF4	81	96.847	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0022969	Celf4	100	81.522	ENSORLG00000008913	celf4	100	78.850	Oryzias_latipes
MGP_SPRETEiJ_G0022969	Celf4	99	78.967	ENSORLG00020008454	celf4	100	77.675	Oryzias_latipes_hni
MGP_SPRETEiJ_G0022969	Celf4	99	80.000	ENSORLG00015004115	celf4	100	78.614	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0022969	Celf4	100	81.182	ENSOMEG00000002391	celf4	100	78.557	Oryzias_melastigma
MGP_SPRETEiJ_G0022969	Celf4	100	83.059	ENSOGAG00000010018	CELF4	100	88.000	Otolemur_garnettii
MGP_SPRETEiJ_G0022969	Celf4	81	91.374	ENSOARG00000005276	CELF4	100	97.764	Ovis_aries
MGP_SPRETEiJ_G0022969	Celf4	92	95.032	ENSPPAG00000020644	CELF4	99	95.032	Pan_paniscus
MGP_SPRETEiJ_G0022969	Celf4	100	99.559	ENSPPRG00000007683	CELF4	100	99.177	Panthera_pardus
MGP_SPRETEiJ_G0022969	Celf4	100	99.559	ENSPTRG00000009982	CELF4	100	99.177	Pan_troglodytes
MGP_SPRETEiJ_G0022969	Celf4	100	99.559	ENSPANG00000006365	CELF4	100	99.177	Papio_anubis
MGP_SPRETEiJ_G0022969	Celf4	100	80.744	ENSPKIG00000017421	celf4	100	78.323	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0022969	Celf4	93	92.416	ENSPSIG00000015538	CELF4	99	97.759	Pelodiscus_sinensis
MGP_SPRETEiJ_G0022969	Celf4	100	100.000	ENSPEMG00000019299	Celf4	100	100.000	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0022969	Celf4	75	86.471	ENSPLAG00000012151	celf4	89	83.424	Poecilia_latipinna
MGP_SPRETEiJ_G0022969	Celf4	87	92.857	ENSPMEG00000015313	celf4	97	92.857	Poecilia_mexicana
MGP_SPRETEiJ_G0022969	Celf4	99	84.891	ENSPREG00000021231	celf4	100	84.095	Poecilia_reticulata
MGP_SPRETEiJ_G0022969	Celf4	88	98.870	ENSPCAG00000000126	CELF4	83	98.870	Procavia_capensis
MGP_SPRETEiJ_G0022969	Celf4	100	99.559	ENSPVAG00000009204	CELF4	100	99.177	Pteropus_vampyrus
MGP_SPRETEiJ_G0022969	Celf4	100	78.118	ENSPNYG00000004131	celf4	100	75.869	Pundamilia_nyererei
MGP_SPRETEiJ_G0022969	Celf4	99	85.089	ENSPNAG00000006426	celf4	100	84.095	Pygocentrus_nattereri
MGP_SPRETEiJ_G0022969	Celf4	91	98.176	ENSRNOG00000014503	Celf4	100	98.176	Rattus_norvegicus
MGP_SPRETEiJ_G0022969	Celf4	100	97.320	ENSRBIG00000035924	CELF4	100	97.320	Rhinopithecus_bieti
MGP_SPRETEiJ_G0022969	Celf4	100	99.559	ENSRROG00000014839	CELF4	100	99.177	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0022969	Celf4	100	99.449	ENSSBOG00000030001	CELF4	100	98.354	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0022969	Celf4	86	94.408	ENSSHAG00000009193	CELF4	96	92.570	Sarcophilus_harrisii
MGP_SPRETEiJ_G0022969	Celf4	100	79.332	ENSSFOG00015010874	celf4	100	79.608	Scleropages_formosus
MGP_SPRETEiJ_G0022969	Celf4	100	81.687	ENSSMAG00000009331	celf4	100	92.857	Scophthalmus_maximus
MGP_SPRETEiJ_G0022969	Celf4	100	75.055	ENSSLDG00000018548	celf4	100	71.134	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0022969	Celf4	99	75.464	ENSSPAG00000018307	celf4	100	76.289	Stegastes_partitus
MGP_SPRETEiJ_G0022969	Celf4	100	99.559	ENSSSCG00000003748	CELF4	100	100.000	Sus_scrofa
MGP_SPRETEiJ_G0022969	Celf4	93	92.416	ENSTGUG00000001649	CELF4	99	97.759	Taeniopygia_guttata
MGP_SPRETEiJ_G0022969	Celf4	100	78.775	ENSTRUG00000015481	celf4	100	76.495	Takifugu_rubripes
MGP_SPRETEiJ_G0022969	Celf4	99	84.890	ENSTNIG00000010679	celf4	99	78.842	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0022969	Celf4	93	99.107	ENSTBEG00000010647	CELF4	100	85.476	Tupaia_belangeri
MGP_SPRETEiJ_G0022969	Celf4	100	99.339	ENSTTRG00000016826	CELF4	100	98.971	Tursiops_truncatus
MGP_SPRETEiJ_G0022969	Celf4	89	98.457	ENSUAMG00000005506	CELF4	83	98.837	Ursus_americanus
MGP_SPRETEiJ_G0022969	Celf4	69	67.778	ENSVPAG00000009042	-	88	67.778	Vicugna_pacos
MGP_SPRETEiJ_G0022969	Celf4	100	97.137	ENSVVUG00000027721	CELF4	100	97.113	Vulpes_vulpes
MGP_SPRETEiJ_G0022969	Celf4	90	98.305	ENSXETG00000020486	celf4	99	98.305	Xenopus_tropicalis
MGP_SPRETEiJ_G0022969	Celf4	100	77.285	ENSXCOG00000017592	celf4	97	80.046	Xiphophorus_couchianus
MGP_SPRETEiJ_G0022969	Celf4	100	83.789	ENSXMAG00000018178	celf4	100	83.826	Xiphophorus_maculatus