EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0022987 (Gene tree)
Gene ID: -
Gene Symbol: Ercc3
Alias: XPB
Full Name: excision repair cross-complementing rodent repair deficiency%2C complementation group 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 33425 bases
Position: chr18:30282650-30316074
Accession: 95414
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0048158	ResIII	PF04851.15	8.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0048159	-	2800	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0048158	-	2727	-	MGP_SPRETEiJ_P0048158	783 (aa)	-	-
MGP_SPRETEiJ_T0048160	-	714	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0022987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0022987's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0022987	Ercc3	100	95.785	ENSG00000163161	ERCC3	99	99.379	Homo_sapiens
MGP_SPRETEiJ_G0022987	Ercc3	100	87.913	ENSAPOG00000014383	ercc3	100	87.786	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0022987	Ercc3	100	95.147	ENSAMEG00000016840	ERCC3	100	95.147	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0022987	Ercc3	99	87.387	ENSACIG00000000126	ercc3	98	88.011	Amphilophus_citrinellus
MGP_SPRETEiJ_G0022987	Ercc3	100	87.913	ENSAOCG00000009396	ercc3	100	88.041	Amphiprion_ocellaris
MGP_SPRETEiJ_G0022987	Ercc3	100	87.913	ENSAPEG00000023077	ercc3	100	88.041	Amphiprion_percula
MGP_SPRETEiJ_G0022987	Ercc3	100	88.295	ENSATEG00000014860	ercc3	100	87.786	Anabas_testudineus
MGP_SPRETEiJ_G0022987	Ercc3	91	93.108	ENSAPLG00000012068	ERCC3	98	93.108	Anas_platyrhynchos
MGP_SPRETEiJ_G0022987	Ercc3	92	93.056	ENSACAG00000009919	ERCC3	100	93.056	Anolis_carolinensis
MGP_SPRETEiJ_G0022987	Ercc3	100	96.169	ENSANAG00000031091	ERCC3	100	96.169	Aotus_nancymaae
MGP_SPRETEiJ_G0022987	Ercc3	100	87.532	ENSACLG00000022508	ercc3	100	87.023	Astatotilapia_calliptera
MGP_SPRETEiJ_G0022987	Ercc3	100	87.898	ENSAMXG00000036947	ercc3	100	87.389	Astyanax_mexicanus
MGP_SPRETEiJ_G0022987	Ercc3	100	95.147	ENSBTAG00000020777	ERCC3	100	95.147	Bos_taurus
MGP_SPRETEiJ_G0022987	Ercc3	99	62.733	WBGene00013441	xpb-1	97	64.185	Caenorhabditis_elegans
MGP_SPRETEiJ_G0022987	Ercc3	100	95.913	ENSCJAG00000010416	ERCC3	100	95.913	Callithrix_jacchus
MGP_SPRETEiJ_G0022987	Ercc3	100	95.785	ENSCAFG00000004497	ERCC3	100	95.785	Canis_familiaris
MGP_SPRETEiJ_G0022987	Ercc3	100	95.785	ENSCAFG00020003495	ERCC3	100	95.785	Canis_lupus_dingo
MGP_SPRETEiJ_G0022987	Ercc3	100	95.530	ENSCHIG00000014551	ERCC3	100	95.530	Capra_hircus
MGP_SPRETEiJ_G0022987	Ercc3	99	95.349	ENSTSYG00000004137	ERCC3	97	96.414	Carlito_syrichta
MGP_SPRETEiJ_G0022987	Ercc3	89	80.401	ENSCAPG00000017027	ERCC3	100	80.401	Cavia_aperea
MGP_SPRETEiJ_G0022987	Ercc3	100	95.402	ENSCPOG00000002144	ERCC3	100	95.402	Cavia_porcellus
MGP_SPRETEiJ_G0022987	Ercc3	100	95.913	ENSCCAG00000024421	ERCC3	100	95.913	Cebus_capucinus
MGP_SPRETEiJ_G0022987	Ercc3	100	96.041	ENSCATG00000032313	ERCC3	100	96.041	Cercocebus_atys
MGP_SPRETEiJ_G0022987	Ercc3	100	96.296	ENSCLAG00000002965	ERCC3	96	96.296	Chinchilla_lanigera
MGP_SPRETEiJ_G0022987	Ercc3	100	95.913	ENSCSAG00000016827	ERCC3	100	95.913	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0022987	Ercc3	83	96.491	ENSCHOG00000007414	ERCC3	83	96.491	Choloepus_hoffmanni
MGP_SPRETEiJ_G0022987	Ercc3	92	93.611	ENSCPBG00000013638	ERCC3	100	93.611	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0022987	Ercc3	96	71.948	ENSCING00000002867	ercc3	96	72.026	Ciona_intestinalis
MGP_SPRETEiJ_G0022987	Ercc3	100	95.913	ENSCANG00000007094	ERCC3	100	95.913	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0022987	Ercc3	100	97.573	ENSCGRG00001009426	Ercc3	100	97.573	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0022987	Ercc3	97	96.715	ENSCGRG00000015547	Ercc3	100	96.715	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0022987	Ercc3	100	86.150	ENSCSEG00000016479	ercc3	100	86.150	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0022987	Ercc3	100	87.532	ENSCVAG00000015177	ercc3	100	87.405	Cyprinodon_variegatus
MGP_SPRETEiJ_G0022987	Ercc3	96	88.391	ENSDARG00000002402	ercc3	100	87.532	Danio_rerio
MGP_SPRETEiJ_G0022987	Ercc3	56	97.279	ENSDNOG00000035027	ERCC3	95	97.279	Dasypus_novemcinctus
MGP_SPRETEiJ_G0022987	Ercc3	96	96.684	ENSDORG00000004671	Ercc3	100	95.785	Dipodomys_ordii
MGP_SPRETEiJ_G0022987	Ercc3	99	68.664	FBgn0001179	hay	94	70.565	Drosophila_melanogaster
MGP_SPRETEiJ_G0022987	Ercc3	90	95.694	ENSETEG00000019887	ERCC3	90	95.694	Echinops_telfairi
MGP_SPRETEiJ_G0022987	Ercc3	100	80.278	ENSEBUG00000009773	ercc3	95	82.781	Eptatretus_burgeri
MGP_SPRETEiJ_G0022987	Ercc3	100	93.400	ENSEASG00005022466	ERCC3	100	93.400	Equus_asinus_asinus
MGP_SPRETEiJ_G0022987	Ercc3	100	95.785	ENSECAG00000006589	ERCC3	100	95.785	Equus_caballus
MGP_SPRETEiJ_G0022987	Ercc3	93	94.270	ENSEEUG00000001057	ERCC3	97	95.238	Erinaceus_europaeus
MGP_SPRETEiJ_G0022987	Ercc3	100	86.005	ENSELUG00000000089	ercc3	99	86.005	Esox_lucius
MGP_SPRETEiJ_G0022987	Ercc3	100	96.041	ENSFCAG00000006989	ERCC3	100	96.041	Felis_catus
MGP_SPRETEiJ_G0022987	Ercc3	99	91.388	ENSFALG00000003936	ERCC3	96	92.338	Ficedula_albicollis
MGP_SPRETEiJ_G0022987	Ercc3	100	94.891	ENSFDAG00000011924	ERCC3	100	94.891	Fukomys_damarensis
MGP_SPRETEiJ_G0022987	Ercc3	100	86.896	ENSFHEG00000005185	ercc3	100	86.641	Fundulus_heteroclitus
MGP_SPRETEiJ_G0022987	Ercc3	100	84.586	ENSGMOG00000018032	ercc3	99	84.331	Gadus_morhua
MGP_SPRETEiJ_G0022987	Ercc3	96	92.185	ENSGALG00000011515	ERCC3	99	91.656	Gallus_gallus
MGP_SPRETEiJ_G0022987	Ercc3	100	87.532	ENSGAFG00000011936	ercc3	100	87.277	Gambusia_affinis
MGP_SPRETEiJ_G0022987	Ercc3	100	86.272	ENSGACG00000015218	ercc3	99	87.449	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0022987	Ercc3	92	93.333	ENSGAGG00000018579	ERCC3	100	93.333	Gopherus_agassizii
MGP_SPRETEiJ_G0022987	Ercc3	100	95.913	ENSGGOG00000015255	ERCC3	100	95.913	Gorilla_gorilla
MGP_SPRETEiJ_G0022987	Ercc3	100	87.532	ENSHBUG00000003818	ercc3	100	87.023	Haplochromis_burtoni
MGP_SPRETEiJ_G0022987	Ercc3	100	96.041	ENSHGLG00000011014	ERCC3	100	96.041	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0022987	Ercc3	100	96.041	ENSHGLG00100013806	ERCC3	100	96.041	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0022987	Ercc3	100	86.369	ENSHCOG00000016924	ercc3	100	85.605	Hippocampus_comes
MGP_SPRETEiJ_G0022987	Ercc3	100	87.150	ENSIPUG00000021000	ercc3	100	87.150	Ictalurus_punctatus
MGP_SPRETEiJ_G0022987	Ercc3	100	96.424	ENSSTOG00000011001	ERCC3	100	96.424	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0022987	Ercc3	90	95.467	ENSJJAG00000001117	Ercc3	100	95.467	Jaculus_jaculus
MGP_SPRETEiJ_G0022987	Ercc3	100	87.802	ENSKMAG00000021764	ercc3	100	87.421	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0022987	Ercc3	100	86.752	ENSLBEG00000000468	ercc3	100	86.497	Labrus_bergylta
MGP_SPRETEiJ_G0022987	Ercc3	96	86.441	ENSLACG00000014815	ERCC3	100	86.055	Latimeria_chalumnae
MGP_SPRETEiJ_G0022987	Ercc3	94	81.611	ENSLOCG00000010907	ercc3	92	82.416	Lepisosteus_oculatus
MGP_SPRETEiJ_G0022987	Ercc3	100	95.402	ENSLAFG00000014866	ERCC3	100	95.402	Loxodonta_africana
MGP_SPRETEiJ_G0022987	Ercc3	100	96.041	ENSMFAG00000003370	ERCC3	100	96.041	Macaca_fascicularis
MGP_SPRETEiJ_G0022987	Ercc3	100	92.055	ENSMNEG00000004215	ERCC3	100	92.055	Macaca_nemestrina
MGP_SPRETEiJ_G0022987	Ercc3	100	96.041	ENSMLEG00000042061	ERCC3	100	96.041	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0022987	Ercc3	100	87.277	ENSMAMG00000004505	ercc3	99	87.150	Mastacembelus_armatus
MGP_SPRETEiJ_G0022987	Ercc3	100	87.532	ENSMZEG00005004854	ercc3	100	87.023	Maylandia_zebra
MGP_SPRETEiJ_G0022987	Ercc3	90	93.059	ENSMGAG00000011706	ERCC3	100	93.201	Meleagris_gallopavo
MGP_SPRETEiJ_G0022987	Ercc3	100	97.066	ENSMAUG00000004515	Ercc3	100	97.066	Mesocricetus_auratus
MGP_SPRETEiJ_G0022987	Ercc3	100	96.807	ENSMICG00000009578	ERCC3	100	96.807	Microcebus_murinus
MGP_SPRETEiJ_G0022987	Ercc3	100	98.084	ENSMOCG00000021767	Ercc3	100	98.084	Microtus_ochrogaster
MGP_SPRETEiJ_G0022987	Ercc3	99	86.323	ENSMMOG00000018174	ercc3	96	87.169	Mola_mola
MGP_SPRETEiJ_G0022987	Ercc3	96	95.099	ENSMODG00000018695	ERCC3	100	94.388	Monodelphis_domestica
MGP_SPRETEiJ_G0022987	Ercc3	100	87.532	ENSMALG00000014944	ercc3	100	86.896	Monopterus_albus
MGP_SPRETEiJ_G0022987	Ercc3	100	99.489	MGP_CAROLIEiJ_G0022075	Ercc3	100	99.489	Mus_caroli
MGP_SPRETEiJ_G0022987	Ercc3	100	99.745	ENSMUSG00000024382	Ercc3	100	99.745	Mus_musculus
MGP_SPRETEiJ_G0022987	Ercc3	100	99.234	MGP_PahariEiJ_G0018809	Ercc3	100	99.234	Mus_pahari
MGP_SPRETEiJ_G0022987	Ercc3	100	96.169	ENSMPUG00000012021	ERCC3	100	96.169	Mustela_putorius_furo
MGP_SPRETEiJ_G0022987	Ercc3	92	90.621	ENSMLUG00000007429	ERCC3	99	90.621	Myotis_lucifugus
MGP_SPRETEiJ_G0022987	Ercc3	95	97.162	ENSNGAG00000019598	Ercc3	100	97.162	Nannospalax_galili
MGP_SPRETEiJ_G0022987	Ercc3	100	87.532	ENSNBRG00000019074	ercc3	100	87.023	Neolamprologus_brichardi
MGP_SPRETEiJ_G0022987	Ercc3	92	94.421	ENSNLEG00000015665	ERCC3	97	94.421	Nomascus_leucogenys
MGP_SPRETEiJ_G0022987	Ercc3	100	92.976	ENSOPRG00000004553	ERCC3	100	92.976	Ochotona_princeps
MGP_SPRETEiJ_G0022987	Ercc3	100	96.169	ENSODEG00000005795	ERCC3	100	96.169	Octodon_degus
MGP_SPRETEiJ_G0022987	Ercc3	100	87.659	ENSONIG00000003255	ercc3	100	87.150	Oreochromis_niloticus
MGP_SPRETEiJ_G0022987	Ercc3	100	95.785	ENSOCUG00000002248	ERCC3	100	95.785	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0022987	Ercc3	100	87.023	ENSORLG00000004393	ercc3	100	86.132	Oryzias_latipes
MGP_SPRETEiJ_G0022987	Ercc3	100	86.896	ENSORLG00020017718	ercc3	100	86.768	Oryzias_latipes_hni
MGP_SPRETEiJ_G0022987	Ercc3	100	86.768	ENSORLG00015015695	ercc3	100	86.132	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0022987	Ercc3	100	87.802	ENSOMEG00000015374	ercc3	100	87.166	Oryzias_melastigma
MGP_SPRETEiJ_G0022987	Ercc3	100	96.561	ENSOGAG00000009103	ERCC3	100	96.561	Otolemur_garnettii
MGP_SPRETEiJ_G0022987	Ercc3	100	95.402	ENSOARG00000016147	ERCC3	100	95.402	Ovis_aries
MGP_SPRETEiJ_G0022987	Ercc3	100	95.913	ENSPPAG00000036166	ERCC3	100	95.913	Pan_paniscus
MGP_SPRETEiJ_G0022987	Ercc3	100	96.169	ENSPPRG00000001305	ERCC3	100	96.169	Panthera_pardus
MGP_SPRETEiJ_G0022987	Ercc3	92	96.940	ENSPTIG00000016969	ERCC3	100	96.940	Panthera_tigris_altaica
MGP_SPRETEiJ_G0022987	Ercc3	100	95.913	ENSPTRG00000046940	ERCC3	100	95.913	Pan_troglodytes
MGP_SPRETEiJ_G0022987	Ercc3	100	96.041	ENSPANG00000007699	ERCC3	100	96.041	Papio_anubis
MGP_SPRETEiJ_G0022987	Ercc3	100	88.041	ENSPKIG00000001319	ercc3	99	89.286	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0022987	Ercc3	92	93.056	ENSPSIG00000014682	ERCC3	100	93.056	Pelodiscus_sinensis
MGP_SPRETEiJ_G0022987	Ercc3	96	89.669	ENSPMGG00000017885	ercc3	99	88.153	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0022987	Ercc3	100	97.957	ENSPEMG00000013733	Ercc3	100	97.957	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0022987	Ercc3	90	79.301	ENSPMAG00000005081	ercc3	99	79.301	Petromyzon_marinus
MGP_SPRETEiJ_G0022987	Ercc3	99	94.968	ENSPCIG00000011821	ERCC3	100	94.643	Phascolarctos_cinereus
MGP_SPRETEiJ_G0022987	Ercc3	96	88.654	ENSPFOG00000015604	ercc3	100	87.277	Poecilia_formosa
MGP_SPRETEiJ_G0022987	Ercc3	96	85.921	ENSPLAG00000022245	ercc3	100	88.920	Poecilia_latipinna
MGP_SPRETEiJ_G0022987	Ercc3	96	88.654	ENSPMEG00000016987	ercc3	100	87.277	Poecilia_mexicana
MGP_SPRETEiJ_G0022987	Ercc3	100	87.786	ENSPREG00000020921	ercc3	100	87.659	Poecilia_reticulata
MGP_SPRETEiJ_G0022987	Ercc3	100	95.153	ENSPPYG00000012769	ERCC3	100	95.153	Pongo_abelii
MGP_SPRETEiJ_G0022987	Ercc3	100	96.807	ENSPCOG00000024903	ERCC3	100	96.807	Propithecus_coquereli
MGP_SPRETEiJ_G0022987	Ercc3	90	94.141	ENSPVAG00000013774	ERCC3	90	94.141	Pteropus_vampyrus
MGP_SPRETEiJ_G0022987	Ercc3	100	87.532	ENSPNYG00000001208	ercc3	100	87.023	Pundamilia_nyererei
MGP_SPRETEiJ_G0022987	Ercc3	100	87.532	ENSPNAG00000005748	ercc3	100	87.786	Pygocentrus_nattereri
MGP_SPRETEiJ_G0022987	Ercc3	100	98.851	ENSRNOG00000013180	Ercc3	100	98.851	Rattus_norvegicus
MGP_SPRETEiJ_G0022987	Ercc3	100	95.785	ENSRBIG00000027692	ERCC3	100	95.785	Rhinopithecus_bieti
MGP_SPRETEiJ_G0022987	Ercc3	100	95.785	ENSRROG00000040673	ERCC3	100	95.785	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0022987	Ercc3	91	55.798	YIL143C	SSL2	85	56.224	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0022987	Ercc3	100	95.658	ENSSBOG00000023079	ERCC3	100	95.658	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0022987	Ercc3	96	94.967	ENSSHAG00000007423	ERCC3	100	94.133	Sarcophilus_harrisii
MGP_SPRETEiJ_G0022987	Ercc3	96	89.153	ENSSFOG00015012753	ercc3	100	87.913	Scleropages_formosus
MGP_SPRETEiJ_G0022987	Ercc3	100	86.168	ENSSMAG00000011915	ercc3	100	86.168	Scophthalmus_maximus
MGP_SPRETEiJ_G0022987	Ercc3	100	87.150	ENSSDUG00000021181	ercc3	100	86.768	Seriola_dumerili
MGP_SPRETEiJ_G0022987	Ercc3	100	87.150	ENSSLDG00000008744	ercc3	98	86.768	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0022987	Ercc3	65	75.977	ENSSARG00000000751	-	85	85.714	Sorex_araneus
MGP_SPRETEiJ_G0022987	Ercc3	90	92.351	ENSSPUG00000015183	ERCC3	91	92.351	Sphenodon_punctatus
MGP_SPRETEiJ_G0022987	Ercc3	100	87.786	ENSSPAG00000004748	ercc3	100	87.659	Stegastes_partitus
MGP_SPRETEiJ_G0022987	Ercc3	100	95.913	ENSSSCG00000015721	ERCC3	100	96.805	Sus_scrofa
MGP_SPRETEiJ_G0022987	Ercc3	99	92.129	ENSTGUG00000004920	-	97	93.767	Taeniopygia_guttata
MGP_SPRETEiJ_G0022987	Ercc3	100	85.605	ENSTRUG00000017185	ercc3	100	85.096	Takifugu_rubripes
MGP_SPRETEiJ_G0022987	Ercc3	97	85.190	ENSTNIG00000005457	ercc3	99	86.111	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0022987	Ercc3	80	96.326	ENSTBEG00000009381	ERCC3	81	96.326	Tupaia_belangeri
MGP_SPRETEiJ_G0022987	Ercc3	67	97.727	ENSUAMG00000009589	-	100	97.727	Ursus_americanus
MGP_SPRETEiJ_G0022987	Ercc3	100	95.402	ENSUMAG00000008361	ERCC3	100	95.402	Ursus_maritimus
MGP_SPRETEiJ_G0022987	Ercc3	92	96.523	ENSVVUG00000010431	ERCC3	100	96.523	Vulpes_vulpes
MGP_SPRETEiJ_G0022987	Ercc3	100	89.949	ENSXETG00000033646	ercc3	100	89.949	Xenopus_tropicalis
MGP_SPRETEiJ_G0022987	Ercc3	99	87.758	ENSXCOG00000001791	ercc3	98	88.391	Xiphophorus_couchianus
MGP_SPRETEiJ_G0022987	Ercc3	100	88.310	ENSXMAG00000003641	ercc3	100	88.183	Xiphophorus_maculatus