EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023020 (Gene tree)
Gene ID: -
Gene Symbol: Matr3
Alias: 1110061A14Rik|2810017I02Rik|D030046F20Rik
Full Name: matrin 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 30143 bases
Position: chr18:33737500-33767642
Accession: 1298379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0048250	RRM_5	PF13893.6	8.5e-07	1	2
MGP_SPRETEiJ_P0048250	RRM_5	PF13893.6	8.5e-07	2	2
MGP_SPRETEiJ_P0048252	RRM_5	PF13893.6	8.5e-07	1	2
MGP_SPRETEiJ_P0048252	RRM_5	PF13893.6	8.5e-07	2	2
MGP_SPRETEiJ_P0048253	RRM_5	PF13893.6	1.1e-06	1	2
MGP_SPRETEiJ_P0048253	RRM_5	PF13893.6	1.1e-06	2	2
MGP_SPRETEiJ_P0048258	RRM_5	PF13893.6	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0048260	-	1685	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0048258	-	4162	-	MGP_SPRETEiJ_P0048258	846 (aa)	-	-
MGP_SPRETEiJ_T0048259	-	681	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0048249	-	555	-	MGP_SPRETEiJ_P0048249	33 (aa)	-	UPI00046211BD
MGP_SPRETEiJ_T0048248	-	762	-	MGP_SPRETEiJ_P0048248	155 (aa)	-	UPI0004620F73
MGP_SPRETEiJ_T0048250	-	1846	-	MGP_SPRETEiJ_P0048250	508 (aa)	-	-
MGP_SPRETEiJ_T0048251	-	1888	-	MGP_SPRETEiJ_P0048251	91 (aa)	-	-
MGP_SPRETEiJ_T0048252	-	1854	-	MGP_SPRETEiJ_P0048252	508 (aa)	-	-
MGP_SPRETEiJ_T0048253	-	1951	-	MGP_SPRETEiJ_P0048253	558 (aa)	-	-
MGP_SPRETEiJ_T0048254	-	412	-	MGP_SPRETEiJ_P0048254	121 (aa)	-	UPI0004621200
MGP_SPRETEiJ_T0048255	-	779	-	MGP_SPRETEiJ_P0048255	60 (aa)	-	UPI0004620F40
MGP_SPRETEiJ_T0048256	-	1504	-	MGP_SPRETEiJ_P0048256	385 (aa)	-	UPI00053BD67D
MGP_SPRETEiJ_T0048257	-	1776	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023020	Matr3	100	97.993	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
MGP_SPRETEiJ_G0023020	Matr3	99	92.634	ENSAMEG00000011347	-	100	92.634	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023020	Matr3	100	77.426	ENSAPLG00000008118	-	100	75.492	Anas_platyrhynchos
MGP_SPRETEiJ_G0023020	Matr3	99	71.316	ENSACAG00000016233	-	99	70.562	Anolis_carolinensis
MGP_SPRETEiJ_G0023020	Matr3	100	97.639	ENSANAG00000022951	-	100	97.639	Aotus_nancymaae
MGP_SPRETEiJ_G0023020	Matr3	76	72.205	ENSANAG00000024654	-	99	72.205	Aotus_nancymaae
MGP_SPRETEiJ_G0023020	Matr3	53	59.259	ENSACLG00000015903	matr3l1.1	62	59.259	Astatotilapia_calliptera
MGP_SPRETEiJ_G0023020	Matr3	94	30.649	ENSAMXG00000010685	matr3l1.1	86	30.377	Astyanax_mexicanus
MGP_SPRETEiJ_G0023020	Matr3	95	33.484	ENSAMXG00000010681	matr3l1.1	77	34.132	Astyanax_mexicanus
MGP_SPRETEiJ_G0023020	Matr3	93	92.043	ENSBTAG00000006756	MATR3	99	92.043	Bos_taurus
MGP_SPRETEiJ_G0023020	Matr3	100	96.464	ENSCJAG00000006888	-	100	96.064	Callithrix_jacchus
MGP_SPRETEiJ_G0023020	Matr3	100	97.291	ENSCAFG00000001345	MATR3	100	97.291	Canis_familiaris
MGP_SPRETEiJ_G0023020	Matr3	99	95.423	ENSCAFG00020010504	-	98	97.775	Canis_lupus_dingo
MGP_SPRETEiJ_G0023020	Matr3	100	97.762	ENSCHIG00000025746	-	100	97.762	Capra_hircus
MGP_SPRETEiJ_G0023020	Matr3	100	97.875	ENSTSYG00000011028	-	100	97.875	Carlito_syrichta
MGP_SPRETEiJ_G0023020	Matr3	99	97.636	ENSCPOG00000014076	-	99	97.636	Cavia_porcellus
MGP_SPRETEiJ_G0023020	Matr3	100	97.875	ENSCCAG00000025074	-	100	97.875	Cebus_capucinus
MGP_SPRETEiJ_G0023020	Matr3	100	97.250	ENSCATG00000041304	-	100	96.601	Cercocebus_atys
MGP_SPRETEiJ_G0023020	Matr3	99	97.872	ENSCLAG00000015998	-	99	97.872	Chinchilla_lanigera
MGP_SPRETEiJ_G0023020	Matr3	100	98.111	ENSCSAG00000013075	-	100	98.111	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023020	Matr3	100	75.794	ENSCPBG00000006303	-	100	75.000	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023020	Matr3	100	96.694	ENSCANG00000028224	-	100	96.694	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023020	Matr3	100	98.583	ENSCGRG00001020227	Matr3	100	98.583	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023020	Matr3	100	98.465	ENSCGRG00000011298	Matr3	100	98.465	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023020	Matr3	99	32.143	ENSCSEG00000012682	matr3l1.1	81	32.143	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0023020	Matr3	87	37.719	ENSCVAG00000005337	matr3l1.1	83	31.140	Cyprinodon_variegatus
MGP_SPRETEiJ_G0023020	Matr3	100	92.316	ENSDNOG00000037723	-	100	92.316	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023020	Matr3	100	97.762	ENSEASG00005020857	-	100	97.762	Equus_asinus_asinus
MGP_SPRETEiJ_G0023020	Matr3	100	97.762	ENSECAG00000012882	MATR3	100	97.762	Equus_caballus
MGP_SPRETEiJ_G0023020	Matr3	94	30.837	ENSELUG00000021848	matr3l1.1	66	53.030	Esox_lucius
MGP_SPRETEiJ_G0023020	Matr3	75	40.196	ENSELUG00000021651	si:ch211-271b14.1	82	40.196	Esox_lucius
MGP_SPRETEiJ_G0023020	Matr3	100	97.644	ENSFCAG00000021911	-	100	97.644	Felis_catus
MGP_SPRETEiJ_G0023020	Matr3	100	75.711	ENSFALG00000003071	-	100	75.000	Ficedula_albicollis
MGP_SPRETEiJ_G0023020	Matr3	100	96.812	ENSFDAG00000017675	-	100	96.812	Fukomys_damarensis
MGP_SPRETEiJ_G0023020	Matr3	100	76.780	ENSGALG00000002478	MATR3	100	73.494	Gallus_gallus
MGP_SPRETEiJ_G0023020	Matr3	100	75.628	ENSGAGG00000011386	-	100	75.000	Gopherus_agassizii
MGP_SPRETEiJ_G0023020	Matr3	100	98.111	ENSGGOG00000007308	-	100	98.111	Gorilla_gorilla
MGP_SPRETEiJ_G0023020	Matr3	100	97.993	ENSHGLG00000004673	MATR3	100	97.993	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023020	Matr3	100	96.857	ENSHGLG00100006442	-	100	96.857	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023020	Matr3	57	37.222	ENSHCOG00000013223	matr3l1.1	84	31.066	Hippocampus_comes
MGP_SPRETEiJ_G0023020	Matr3	100	97.762	ENSSTOG00000014746	-	100	97.762	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023020	Matr3	100	69.667	ENSJJAG00000011022	-	100	69.863	Jaculus_jaculus
MGP_SPRETEiJ_G0023020	Matr3	100	97.048	ENSJJAG00000021710	-	100	97.048	Jaculus_jaculus
MGP_SPRETEiJ_G0023020	Matr3	59	53.704	ENSLBEG00000018267	matr3l1.1	69	53.704	Labrus_bergylta
MGP_SPRETEiJ_G0023020	Matr3	99	55.809	ENSLACG00000006743	-	99	56.786	Latimeria_chalumnae
MGP_SPRETEiJ_G0023020	Matr3	100	97.446	ENSMFAG00000000634	-	100	96.780	Macaca_fascicularis
MGP_SPRETEiJ_G0023020	Matr3	59	96.819	ENSMMUG00000015963	-	98	96.819	Macaca_mulatta
MGP_SPRETEiJ_G0023020	Matr3	100	97.446	ENSMMUG00000016741	MATR3	99	97.980	Macaca_mulatta
MGP_SPRETEiJ_G0023020	Matr3	100	98.229	ENSMNEG00000042856	-	100	98.229	Macaca_nemestrina
MGP_SPRETEiJ_G0023020	Matr3	100	98.229	ENSMLEG00000041178	-	100	98.229	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023020	Matr3	72	55.556	ENSMAMG00000013840	matr3l1.1	78	36.905	Mastacembelus_armatus
MGP_SPRETEiJ_G0023020	Matr3	100	76.670	ENSMGAG00000001331	-	100	74.890	Meleagris_gallopavo
MGP_SPRETEiJ_G0023020	Matr3	100	98.465	ENSMAUG00000011647	Matr3	100	98.465	Mesocricetus_auratus
MGP_SPRETEiJ_G0023020	Matr3	99	96.215	ENSMICG00000012438	-	99	96.215	Microcebus_murinus
MGP_SPRETEiJ_G0023020	Matr3	100	98.347	ENSMOCG00000015711	Matr3	100	98.347	Microtus_ochrogaster
MGP_SPRETEiJ_G0023020	Matr3	100	90.398	ENSMODG00000011925	-	99	89.813	Monodelphis_domestica
MGP_SPRETEiJ_G0023020	Matr3	100	99.645	MGP_CAROLIEiJ_G0022108	Matr3	100	99.645	Mus_caroli
MGP_SPRETEiJ_G0023020	Matr3	100	99.645	ENSMUSG00000037236	Matr3	100	99.645	Mus_musculus
MGP_SPRETEiJ_G0023020	Matr3	100	99.174	MGP_PahariEiJ_G0018842	Matr3	100	99.174	Mus_pahari
MGP_SPRETEiJ_G0023020	Matr3	100	96.065	ENSMPUG00000009297	-	100	96.065	Mustela_putorius_furo
MGP_SPRETEiJ_G0023020	Matr3	100	96.824	ENSMLUG00000005798	-	99	96.824	Myotis_lucifugus
MGP_SPRETEiJ_G0023020	Matr3	100	98.465	ENSNGAG00000017452	Matr3	100	98.465	Nannospalax_galili
MGP_SPRETEiJ_G0023020	Matr3	100	98.229	ENSNLEG00000009093	-	100	98.229	Nomascus_leucogenys
MGP_SPRETEiJ_G0023020	Matr3	99	90.282	ENSOPRG00000016511	-	100	90.282	Ochotona_princeps
MGP_SPRETEiJ_G0023020	Matr3	99	97.518	ENSODEG00000003015	-	99	97.518	Octodon_degus
MGP_SPRETEiJ_G0023020	Matr3	100	97.875	ENSOCUG00000026311	MATR3	100	97.875	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023020	Matr3	51	48.148	ENSORLG00000025674	matr3l1.1	80	33.333	Oryzias_latipes
MGP_SPRETEiJ_G0023020	Matr3	70	37.879	ENSORLG00020009362	matr3l1.1	80	33.333	Oryzias_latipes_hni
MGP_SPRETEiJ_G0023020	Matr3	63	48.148	ENSORLG00015018551	matr3l1.1	81	33.333	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0023020	Matr3	68	40.909	ENSOMEG00000022287	matr3l1.1	81	38.400	Oryzias_melastigma
MGP_SPRETEiJ_G0023020	Matr3	100	98.347	ENSOGAG00000010607	-	100	98.347	Otolemur_garnettii
MGP_SPRETEiJ_G0023020	Matr3	100	97.762	ENSOARG00000016931	-	99	97.762	Ovis_aries
MGP_SPRETEiJ_G0023020	Matr3	100	97.250	ENSPPAG00000001418	-	100	96.780	Pan_paniscus
MGP_SPRETEiJ_G0023020	Matr3	100	91.159	ENSPPAG00000026720	-	99	91.773	Pan_paniscus
MGP_SPRETEiJ_G0023020	Matr3	100	97.762	ENSPPRG00000008004	-	100	97.762	Panthera_pardus
MGP_SPRETEiJ_G0023020	Matr3	100	96.477	ENSPTIG00000010711	-	100	97.660	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023020	Matr3	100	97.250	ENSPTRG00000017294	MATR3	100	96.780	Pan_troglodytes
MGP_SPRETEiJ_G0023020	Matr3	100	97.250	ENSPANG00000032489	-	99	97.263	Papio_anubis
MGP_SPRETEiJ_G0023020	Matr3	100	97.446	ENSPANG00000012018	-	100	96.812	Papio_anubis
MGP_SPRETEiJ_G0023020	Matr3	97	34.426	ENSPKIG00000000333	matr3l1.1	77	34.137	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0023020	Matr3	100	76.149	ENSPSIG00000014598	-	100	74.561	Pelodiscus_sinensis
MGP_SPRETEiJ_G0023020	Matr3	100	97.993	ENSPEMG00000020679	Matr3	100	97.993	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023020	Matr3	100	92.961	ENSPPYG00000015835	-	100	92.961	Pongo_abelii
MGP_SPRETEiJ_G0023020	Matr3	100	98.111	ENSPCOG00000025718	-	100	98.111	Propithecus_coquereli
MGP_SPRETEiJ_G0023020	Matr3	98	93.060	ENSPVAG00000015431	-	100	93.060	Pteropus_vampyrus
MGP_SPRETEiJ_G0023020	Matr3	58	46.512	ENSPNYG00000015855	-	78	59.259	Pundamilia_nyererei
MGP_SPRETEiJ_G0023020	Matr3	65	50.633	ENSPNAG00000030007	si:ch211-271b14.1	56	50.633	Pygocentrus_nattereri
MGP_SPRETEiJ_G0023020	Matr3	100	98.819	ENSRNOG00000019875	Matr3	100	98.819	Rattus_norvegicus
MGP_SPRETEiJ_G0023020	Matr3	100	97.446	ENSRBIG00000034713	-	100	96.780	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023020	Matr3	100	96.576	ENSRROG00000043949	-	100	96.576	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023020	Matr3	100	97.446	ENSRROG00000039415	-	100	97.446	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023020	Matr3	100	97.757	ENSSBOG00000030159	-	100	97.757	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023020	Matr3	100	90.515	ENSSHAG00000010331	-	99	89.930	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023020	Matr3	62	55.556	ENSSDUG00000015369	matr3l1.1	79	35.714	Seriola_dumerili
MGP_SPRETEiJ_G0023020	Matr3	99	75.164	ENSSPUG00000019236	-	99	74.477	Sphenodon_punctatus
MGP_SPRETEiJ_G0023020	Matr3	100	98.115	ENSSSCG00000014343	-	100	98.115	Sus_scrofa
MGP_SPRETEiJ_G0023020	Matr3	99	76.721	ENSTGUG00000014568	MATR3	99	75.219	Taeniopygia_guttata
MGP_SPRETEiJ_G0023020	Matr3	53	37.327	ENSTRUG00000001692	-	68	35.317	Takifugu_rubripes
MGP_SPRETEiJ_G0023020	Matr3	86	39.247	ENSTNIG00000003166	matr3l1.1	79	57.143	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0023020	Matr3	85	97.914	ENSUAMG00000000097	-	97	97.914	Ursus_americanus
MGP_SPRETEiJ_G0023020	Matr3	100	97.173	ENSUMAG00000015808	-	100	97.173	Ursus_maritimus
MGP_SPRETEiJ_G0023020	Matr3	100	91.991	ENSVPAG00000006337	-	100	91.991	Vicugna_pacos
MGP_SPRETEiJ_G0023020	Matr3	100	97.527	ENSVVUG00000020287	-	100	97.527	Vulpes_vulpes
MGP_SPRETEiJ_G0023020	Matr3	85	57.201	ENSXETG00000003838	matr3	75	58.561	Xenopus_tropicalis
MGP_SPRETEiJ_G0023020	Matr3	64	58.537	ENSXMAG00000014107	-	58	30.621	Xiphophorus_maculatus