EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023184 (Gene tree)
Gene ID: -
Gene Symbol: Srfbp1
Alias: 2810036K01Rik
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 29565 bases
Position: chr18:51174021-51203585
Accession: 1914472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0048662	BUD22	PF09073.10	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0048662	-	1463	-	MGP_SPRETEiJ_P0048662	441 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023184's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023184's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.130	ENSG00000151304	SRFBP1	100	67.130	Homo_sapiens
MGP_SPRETEiJ_G0023184	Srfbp1	97	65.187	ENSAMEG00000018050	SRFBP1	99	65.501	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023184	Srfbp1	99	37.778	ENSATEG00000007289	-	86	36.739	Anabas_testudineus
MGP_SPRETEiJ_G0023184	Srfbp1	98	42.952	ENSACAG00000003779	SRFBP1	100	42.794	Anolis_carolinensis
MGP_SPRETEiJ_G0023184	Srfbp1	98	64.583	ENSANAG00000022485	SRFBP1	100	64.583	Aotus_nancymaae
MGP_SPRETEiJ_G0023184	Srfbp1	97	36.456	ENSACLG00000013909	-	90	36.694	Astatotilapia_calliptera
MGP_SPRETEiJ_G0023184	Srfbp1	98	64.269	ENSBTAG00000014320	SRFBP1	100	64.583	Bos_taurus
MGP_SPRETEiJ_G0023184	Srfbp1	98	66.513	ENSCJAG00000017177	SRFBP1	100	66.513	Callithrix_jacchus
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.206	ENSCAFG00000000512	SRFBP1	100	67.206	Canis_familiaris
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.206	ENSCAFG00020009389	SRFBP1	100	67.206	Canis_lupus_dingo
MGP_SPRETEiJ_G0023184	Srfbp1	95	45.823	ENSTSYG00000006869	-	99	45.823	Carlito_syrichta
MGP_SPRETEiJ_G0023184	Srfbp1	97	63.403	ENSTSYG00000008630	-	99	63.403	Carlito_syrichta
MGP_SPRETEiJ_G0023184	Srfbp1	98	64.516	ENSCPOG00000004695	SRFBP1	100	64.516	Cavia_porcellus
MGP_SPRETEiJ_G0023184	Srfbp1	98	65.820	ENSCCAG00000032237	-	100	65.820	Cebus_capucinus
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.824	ENSCATG00000040904	SRFBP1	100	67.361	Cercocebus_atys
MGP_SPRETEiJ_G0023184	Srfbp1	98	64.747	ENSCLAG00000003630	SRFBP1	100	64.747	Chinchilla_lanigera
MGP_SPRETEiJ_G0023184	Srfbp1	98	64.203	ENSCSAG00000014636	SRFBP1	100	66.051	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.593	ENSCANG00000041298	SRFBP1	100	67.130	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023184	Srfbp1	100	76.871	ENSCGRG00001000718	Srfbp1	100	76.871	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023184	Srfbp1	94	75.240	ENSCGRG00000010837	Srfbp1	100	75.240	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023184	Srfbp1	100	40.044	ENSCSEG00000011789	-	79	62.400	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0023184	Srfbp1	96	39.180	ENSCVAG00000013010	-	97	39.636	Cyprinodon_variegatus
MGP_SPRETEiJ_G0023184	Srfbp1	78	57.681	ENSDNOG00000017733	SRFBP1	100	57.681	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023184	Srfbp1	77	52.047	ENSETEG00000012408	SRFBP1	100	52.478	Echinops_telfairi
MGP_SPRETEiJ_G0023184	Srfbp1	70	46.154	ENSEBUG00000007806	SRFBP1	58	46.154	Eptatretus_burgeri
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.593	ENSEASG00005012421	SRFBP1	100	67.593	Equus_asinus_asinus
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.130	ENSECAG00000015330	SRFBP1	100	67.130	Equus_caballus
MGP_SPRETEiJ_G0023184	Srfbp1	98	57.968	ENSEEUG00000011514	SRFBP1	100	57.968	Erinaceus_europaeus
MGP_SPRETEiJ_G0023184	Srfbp1	99	36.957	ENSELUG00000018381	-	99	37.500	Esox_lucius
MGP_SPRETEiJ_G0023184	Srfbp1	98	66.898	ENSFCAG00000035118	SRFBP1	100	66.898	Felis_catus
MGP_SPRETEiJ_G0023184	Srfbp1	94	42.404	ENSFALG00000007595	SRFBP1	100	42.857	Ficedula_albicollis
MGP_SPRETEiJ_G0023184	Srfbp1	98	62.759	ENSFDAG00000005102	SRFBP1	100	62.759	Fukomys_damarensis
MGP_SPRETEiJ_G0023184	Srfbp1	77	69.048	ENSFHEG00000000477	-	87	36.893	Fundulus_heteroclitus
MGP_SPRETEiJ_G0023184	Srfbp1	67	60.345	ENSGMOG00000012729	-	85	36.952	Gadus_morhua
MGP_SPRETEiJ_G0023184	Srfbp1	97	42.857	ENSGALG00000005316	SRFBP1	99	41.087	Gallus_gallus
MGP_SPRETEiJ_G0023184	Srfbp1	74	69.048	ENSGAFG00000018777	-	87	39.549	Gambusia_affinis
MGP_SPRETEiJ_G0023184	Srfbp1	99	40.590	ENSGACG00000009055	-	85	40.271	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0023184	Srfbp1	94	43.707	ENSGAGG00000024915	SRFBP1	99	45.538	Gopherus_agassizii
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.361	ENSGGOG00000007725	SRFBP1	100	67.361	Gorilla_gorilla
MGP_SPRETEiJ_G0023184	Srfbp1	99	67.120	ENSSTOG00000029184	SRFBP1	99	67.120	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023184	Srfbp1	94	63.462	ENSJJAG00000013229	Srfbp1	100	63.462	Jaculus_jaculus
MGP_SPRETEiJ_G0023184	Srfbp1	77	34.426	ENSLACG00000004456	SRFBP1	100	34.426	Latimeria_chalumnae
MGP_SPRETEiJ_G0023184	Srfbp1	98	42.424	ENSLOCG00000008772	SRFBP1	100	42.641	Lepisosteus_oculatus
MGP_SPRETEiJ_G0023184	Srfbp1	99	64.560	ENSLAFG00000015303	SRFBP1	100	64.560	Loxodonta_africana
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.593	ENSMFAG00000031263	SRFBP1	100	67.130	Macaca_fascicularis
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.824	ENSMMUG00000021009	SRFBP1	100	67.361	Macaca_mulatta
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.593	ENSMNEG00000040870	SRFBP1	100	67.130	Macaca_nemestrina
MGP_SPRETEiJ_G0023184	Srfbp1	99	37.132	ENSMAMG00000004632	-	88	35.872	Mastacembelus_armatus
MGP_SPRETEiJ_G0023184	Srfbp1	97	37.603	ENSMZEG00005000432	-	90	37.628	Maylandia_zebra
MGP_SPRETEiJ_G0023184	Srfbp1	100	74.603	ENSMAUG00000009431	Srfbp1	100	74.603	Mesocricetus_auratus
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.735	ENSMICG00000042923	SRFBP1	100	67.735	Microcebus_murinus
MGP_SPRETEiJ_G0023184	Srfbp1	100	75.057	ENSMOCG00000006206	Srfbp1	100	75.057	Microtus_ochrogaster
MGP_SPRETEiJ_G0023184	Srfbp1	98	54.253	ENSMODG00000013487	-	99	54.253	Monodelphis_domestica
MGP_SPRETEiJ_G0023184	Srfbp1	72	75.000	ENSMALG00000001812	-	72	76.667	Monopterus_albus
MGP_SPRETEiJ_G0023184	Srfbp1	100	95.011	MGP_CAROLIEiJ_G0022271	Srfbp1	100	95.011	Mus_caroli
MGP_SPRETEiJ_G0023184	Srfbp1	100	96.825	ENSMUSG00000024528	Srfbp1	100	96.825	Mus_musculus
MGP_SPRETEiJ_G0023184	Srfbp1	100	91.176	MGP_PahariEiJ_G0019004	Srfbp1	100	91.176	Mus_pahari
MGP_SPRETEiJ_G0023184	Srfbp1	94	66.427	ENSMPUG00000013031	SRFBP1	100	66.427	Mustela_putorius_furo
MGP_SPRETEiJ_G0023184	Srfbp1	97	64.186	ENSMLUG00000009984	SRFBP1	100	64.186	Myotis_lucifugus
MGP_SPRETEiJ_G0023184	Srfbp1	99	63.387	ENSNGAG00000013229	Srfbp1	99	63.387	Nannospalax_galili
MGP_SPRETEiJ_G0023184	Srfbp1	97	40.406	ENSNBRG00000001146	-	98	40.271	Neolamprologus_brichardi
MGP_SPRETEiJ_G0023184	Srfbp1	98	66.667	ENSNLEG00000011949	SRFBP1	100	66.667	Nomascus_leucogenys
MGP_SPRETEiJ_G0023184	Srfbp1	64	67.593	ENSOPRG00000003881	-	77	67.593	Ochotona_princeps
MGP_SPRETEiJ_G0023184	Srfbp1	94	60.382	ENSODEG00000007258	SRFBP1	100	60.382	Octodon_degus
MGP_SPRETEiJ_G0023184	Srfbp1	84	47.493	ENSOANG00000010042	-	99	47.493	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023184	Srfbp1	99	66.440	ENSOCUG00000009556	SRFBP1	99	66.440	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023184	Srfbp1	97	37.323	ENSORLG00000014234	-	88	37.628	Oryzias_latipes
MGP_SPRETEiJ_G0023184	Srfbp1	97	33.716	ENSORLG00015000238	-	77	58.537	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0023184	Srfbp1	98	63.573	ENSOGAG00000032423	SRFBP1	100	63.573	Otolemur_garnettii
MGP_SPRETEiJ_G0023184	Srfbp1	98	66.667	ENSPPAG00000035848	SRFBP1	100	66.667	Pan_paniscus
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.130	ENSPPRG00000001695	SRFBP1	100	67.130	Panthera_pardus
MGP_SPRETEiJ_G0023184	Srfbp1	98	66.898	ENSPTIG00000012305	SRFBP1	100	66.898	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023184	Srfbp1	98	66.898	ENSPTRG00000017172	SRFBP1	100	66.898	Pan_troglodytes
MGP_SPRETEiJ_G0023184	Srfbp1	98	66.589	ENSPANG00000003799	SRFBP1	100	66.898	Papio_anubis
MGP_SPRETEiJ_G0023184	Srfbp1	97	34.320	ENSPKIG00000024291	-	99	34.122	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0023184	Srfbp1	98	45.638	ENSPSIG00000010650	SRFBP1	99	45.638	Pelodiscus_sinensis
MGP_SPRETEiJ_G0023184	Srfbp1	98	55.125	ENSPCIG00000028532	SRFBP1	94	54.649	Phascolarctos_cinereus
MGP_SPRETEiJ_G0023184	Srfbp1	97	41.648	ENSPFOG00000005272	-	87	41.425	Poecilia_formosa
MGP_SPRETEiJ_G0023184	Srfbp1	76	62.745	ENSPLAG00000018282	-	87	38.889	Poecilia_latipinna
MGP_SPRETEiJ_G0023184	Srfbp1	76	60.784	ENSPMEG00000020184	-	88	39.630	Poecilia_mexicana
MGP_SPRETEiJ_G0023184	Srfbp1	96	42.404	ENSPREG00000017248	-	98	42.081	Poecilia_reticulata
MGP_SPRETEiJ_G0023184	Srfbp1	98	66.898	ENSPPYG00000015714	SRFBP1	100	66.898	Pongo_abelii
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.963	ENSPCOG00000027331	SRFBP1	100	67.963	Propithecus_coquereli
MGP_SPRETEiJ_G0023184	Srfbp1	56	83.766	ENSPVAG00000017512	-	58	83.766	Pteropus_vampyrus
MGP_SPRETEiJ_G0023184	Srfbp1	97	39.394	ENSPNYG00000010355	-	99	40.741	Pundamilia_nyererei
MGP_SPRETEiJ_G0023184	Srfbp1	69	53.731	ENSPNAG00000029666	srfbp1	95	46.341	Pygocentrus_nattereri
MGP_SPRETEiJ_G0023184	Srfbp1	100	80.769	ENSRNOG00000014808	Srfbp1	100	80.769	Rattus_norvegicus
MGP_SPRETEiJ_G0023184	Srfbp1	95	63.183	ENSRBIG00000031064	SRFBP1	99	62.708	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023184	Srfbp1	98	67.824	ENSRROG00000026932	SRFBP1	100	67.361	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023184	Srfbp1	98	65.972	ENSSBOG00000015464	-	99	65.972	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023184	Srfbp1	98	55.353	ENSSHAG00000016003	SRFBP1	99	55.353	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023184	Srfbp1	97	37.660	ENSSFOG00015001274	srfbp1	99	37.872	Scleropages_formosus
MGP_SPRETEiJ_G0023184	Srfbp1	69	64.800	ENSSMAG00000020630	-	59	64.800	Scophthalmus_maximus
MGP_SPRETEiJ_G0023184	Srfbp1	71	62.406	ENSSDUG00000001828	-	61	62.406	Seriola_dumerili
MGP_SPRETEiJ_G0023184	Srfbp1	98	63.825	ENSSARG00000010669	SRFBP1	100	65.207	Sorex_araneus
MGP_SPRETEiJ_G0023184	Srfbp1	95	43.182	ENSSPUG00000009204	SRFBP1	99	43.182	Sphenodon_punctatus
MGP_SPRETEiJ_G0023184	Srfbp1	98	66.125	ENSSSCG00000022656	SRFBP1	100	66.125	Sus_scrofa
MGP_SPRETEiJ_G0023184	Srfbp1	99	42.000	ENSTNIG00000009267	-	99	43.488	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0023184	Srfbp1	73	70.270	ENSTTRG00000007726	SRFBP1	77	70.270	Tursiops_truncatus
MGP_SPRETEiJ_G0023184	Srfbp1	94	68.345	ENSUAMG00000016707	SRFBP1	100	68.345	Ursus_americanus
MGP_SPRETEiJ_G0023184	Srfbp1	95	67.303	ENSUMAG00000018340	SRFBP1	100	64.539	Ursus_maritimus
MGP_SPRETEiJ_G0023184	Srfbp1	98	65.893	ENSVPAG00000005714	SRFBP1	100	65.893	Vicugna_pacos
MGP_SPRETEiJ_G0023184	Srfbp1	98	66.513	ENSVVUG00000019178	SRFBP1	100	66.513	Vulpes_vulpes
MGP_SPRETEiJ_G0023184	Srfbp1	97	42.350	ENSXETG00000004681	srfbp1	99	43.146	Xenopus_tropicalis
MGP_SPRETEiJ_G0023184	Srfbp1	97	40.964	ENSXCOG00000003410	-	99	40.080	Xiphophorus_couchianus
MGP_SPRETEiJ_G0023184	Srfbp1	96	40.452	ENSXMAG00000026251	-	86	40.164	Xiphophorus_maculatus