EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023304 (Gene tree)
Gene ID: -
Gene Symbol: Mbd1
Alias: Cxxc3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 20593 bases
Position: chr18:73342429-73363021
Accession: 1333811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0049053	MBD	PF01429.19	4.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0049054	-	2658	-	MGP_SPRETEiJ_P0049054	618 (aa)	-	-
MGP_SPRETEiJ_T0049053	-	2781	-	MGP_SPRETEiJ_P0049053	614 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023304's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023304	Mbd1	99	69.643	ENSG00000141644	MBD1	99	77.515	Homo_sapiens
MGP_SPRETEiJ_G0023304	Mbd1	99	65.630	ENSAMEG00000000238	MBD1	94	66.252	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023304	Mbd1	65	39.443	ENSACAG00000006091	-	100	39.171	Anolis_carolinensis
MGP_SPRETEiJ_G0023304	Mbd1	99	68.618	ENSANAG00000036253	MBD1	98	65.732	Aotus_nancymaae
MGP_SPRETEiJ_G0023304	Mbd1	99	66.451	ENSBTAG00000003801	MBD1	98	67.044	Bos_taurus
MGP_SPRETEiJ_G0023304	Mbd1	99	68.618	ENSCJAG00000004959	MBD1	98	64.526	Callithrix_jacchus
MGP_SPRETEiJ_G0023304	Mbd1	99	64.953	ENSCAFG00000018928	MBD1	94	65.576	Canis_familiaris
MGP_SPRETEiJ_G0023304	Mbd1	99	64.798	ENSCAFG00020024272	MBD1	96	65.421	Canis_lupus_dingo
MGP_SPRETEiJ_G0023304	Mbd1	99	66.451	ENSCHIG00000021134	MBD1	98	66.882	Capra_hircus
MGP_SPRETEiJ_G0023304	Mbd1	99	67.805	ENSTSYG00000000509	MBD1	98	64.953	Carlito_syrichta
MGP_SPRETEiJ_G0023304	Mbd1	100	56.311	ENSCAPG00000015782	MBD1	100	55.663	Cavia_aperea
MGP_SPRETEiJ_G0023304	Mbd1	99	61.356	ENSCPOG00000001671	MBD1	98	59.906	Cavia_porcellus
MGP_SPRETEiJ_G0023304	Mbd1	99	67.480	ENSCCAG00000034600	MBD1	96	61.706	Cebus_capucinus
MGP_SPRETEiJ_G0023304	Mbd1	99	69.643	ENSCATG00000029959	MBD1	98	68.882	Cercocebus_atys
MGP_SPRETEiJ_G0023304	Mbd1	99	66.615	ENSCLAG00000007457	MBD1	87	66.304	Chinchilla_lanigera
MGP_SPRETEiJ_G0023304	Mbd1	99	69.481	ENSCSAG00000018070	MBD1	98	69.044	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023304	Mbd1	99	69.481	ENSCANG00000033425	MBD1	98	69.044	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023304	Mbd1	99	75.935	ENSCGRG00001014843	Mbd1	98	75.566	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023304	Mbd1	99	60.552	ENSCGRG00000014135	Mbd1	100	65.422	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023304	Mbd1	99	59.346	ENSDNOG00000015998	MBD1	98	61.526	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023304	Mbd1	100	61.489	ENSDORG00000013917	Mbd1	100	61.489	Dipodomys_ordii
MGP_SPRETEiJ_G0023304	Mbd1	99	68.669	ENSEASG00005003857	MBD1	98	67.264	Equus_asinus_asinus
MGP_SPRETEiJ_G0023304	Mbd1	99	68.558	ENSECAG00000011497	MBD1	79	68.720	Equus_caballus
MGP_SPRETEiJ_G0023304	Mbd1	99	67.747	ENSFCAG00000015730	MBD1	98	65.941	Felis_catus
MGP_SPRETEiJ_G0023304	Mbd1	98	59.314	ENSFDAG00000011085	MBD1	98	59.643	Fukomys_damarensis
MGP_SPRETEiJ_G0023304	Mbd1	53	40.483	ENSGAGG00000008206	-	52	45.862	Gopherus_agassizii
MGP_SPRETEiJ_G0023304	Mbd1	99	69.643	ENSGGOG00000016966	MBD1	98	69.206	Gorilla_gorilla
MGP_SPRETEiJ_G0023304	Mbd1	99	69.805	ENSHGLG00000008740	MBD1	98	69.968	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023304	Mbd1	92	64.072	ENSHGLG00100005198	MBD1	98	64.368	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023304	Mbd1	99	67.727	ENSSTOG00000007780	MBD1	98	67.886	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023304	Mbd1	100	64.516	ENSJJAG00000022859	Mbd1	100	64.516	Jaculus_jaculus
MGP_SPRETEiJ_G0023304	Mbd1	66	39.568	ENSLACG00000002414	-	56	38.631	Latimeria_chalumnae
MGP_SPRETEiJ_G0023304	Mbd1	99	58.900	ENSLAFG00000031328	MBD1	96	59.223	Loxodonta_africana
MGP_SPRETEiJ_G0023304	Mbd1	99	69.643	ENSMFAG00000026335	MBD1	98	68.882	Macaca_fascicularis
MGP_SPRETEiJ_G0023304	Mbd1	99	66.927	ENSMMUG00000009050	MBD1	98	66.199	Macaca_mulatta
MGP_SPRETEiJ_G0023304	Mbd1	99	69.643	ENSMNEG00000038822	MBD1	98	68.882	Macaca_nemestrina
MGP_SPRETEiJ_G0023304	Mbd1	99	69.643	ENSMLEG00000043121	MBD1	98	68.882	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023304	Mbd1	52	68.239	ENSMAUG00000021798	-	95	76.408	Mesocricetus_auratus
MGP_SPRETEiJ_G0023304	Mbd1	99	69.952	ENSMICG00000006414	MBD1	98	69.305	Microcebus_murinus
MGP_SPRETEiJ_G0023304	Mbd1	53	66.261	ENSMOCG00000011976	-	97	73.559	Microtus_ochrogaster
MGP_SPRETEiJ_G0023304	Mbd1	52	41.667	ENSMODG00000024864	-	100	47.241	Monodelphis_domestica
MGP_SPRETEiJ_G0023304	Mbd1	52	47.799	ENSMODG00000010534	-	99	52.113	Monodelphis_domestica
MGP_SPRETEiJ_G0023304	Mbd1	99	96.940	ENSMUSG00000024561	Mbd1	96	96.940	Mus_musculus
MGP_SPRETEiJ_G0023304	Mbd1	99	88.312	MGP_PahariEiJ_G0019128	Mbd1	98	88.312	Mus_pahari
MGP_SPRETEiJ_G0023304	Mbd1	99	63.764	ENSMPUG00000008843	MBD1	94	64.386	Mustela_putorius_furo
MGP_SPRETEiJ_G0023304	Mbd1	99	63.906	ENSMLUG00000008286	MBD1	94	64.062	Myotis_lucifugus
MGP_SPRETEiJ_G0023304	Mbd1	100	65.041	ENSNGAG00000011412	Mbd1	100	65.041	Nannospalax_galili
MGP_SPRETEiJ_G0023304	Mbd1	97	57.407	ENSNLEG00000032711	-	89	58.151	Nomascus_leucogenys
MGP_SPRETEiJ_G0023304	Mbd1	99	68.994	ENSNLEG00000011661	-	98	68.558	Nomascus_leucogenys
MGP_SPRETEiJ_G0023304	Mbd1	99	60.227	ENSOPRG00000007647	MBD1	98	60.227	Ochotona_princeps
MGP_SPRETEiJ_G0023304	Mbd1	100	63.065	ENSODEG00000018451	MBD1	100	62.581	Octodon_degus
MGP_SPRETEiJ_G0023304	Mbd1	86	41.049	ENSOANG00000014593	-	99	40.476	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023304	Mbd1	99	63.084	ENSOCUG00000006554	MBD1	98	63.707	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023304	Mbd1	99	64.977	ENSOGAG00000003784	MBD1	94	65.131	Otolemur_garnettii
MGP_SPRETEiJ_G0023304	Mbd1	99	63.764	ENSOARG00000004218	MBD1	93	64.186	Ovis_aries
MGP_SPRETEiJ_G0023304	Mbd1	99	69.805	ENSPPAG00000038886	MBD1	98	69.368	Pan_paniscus
MGP_SPRETEiJ_G0023304	Mbd1	99	67.799	ENSPPRG00000021387	MBD1	98	68.608	Panthera_pardus
MGP_SPRETEiJ_G0023304	Mbd1	99	67.961	ENSPTIG00000021231	MBD1	98	68.770	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023304	Mbd1	99	69.805	ENSPTRG00000010021	MBD1	98	69.368	Pan_troglodytes
MGP_SPRETEiJ_G0023304	Mbd1	99	69.593	ENSPANG00000010867	MBD1	98	66.199	Papio_anubis
MGP_SPRETEiJ_G0023304	Mbd1	100	68.506	ENSPEMG00000022630	Mbd1	100	68.344	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023304	Mbd1	97	42.857	ENSPCIG00000027937	-	79	42.400	Phascolarctos_cinereus
MGP_SPRETEiJ_G0023304	Mbd1	99	69.156	ENSPPYG00000009158	MBD1	89	68.720	Pongo_abelii
MGP_SPRETEiJ_G0023304	Mbd1	99	60.841	ENSPCAG00000001648	MBD1	98	60.841	Procavia_capensis
MGP_SPRETEiJ_G0023304	Mbd1	99	71.036	ENSPCOG00000012450	MBD1	98	71.839	Propithecus_coquereli
MGP_SPRETEiJ_G0023304	Mbd1	100	79.424	ENSRNOG00000024104	Mbd1	100	79.012	Rattus_norvegicus
MGP_SPRETEiJ_G0023304	Mbd1	99	62.500	ENSRBIG00000041294	MBD1	98	62.237	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023304	Mbd1	100	69.243	ENSRROG00000032517	MBD1	98	68.720	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023304	Mbd1	99	68.506	ENSSBOG00000027169	MBD1	97	62.437	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023304	Mbd1	67	44.601	ENSSHAG00000003661	-	83	45.169	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023304	Mbd1	99	66.234	ENSSSCG00000004516	MBD1	98	66.396	Sus_scrofa
MGP_SPRETEiJ_G0023304	Mbd1	69	60.851	ENSTBEG00000012651	-	67	60.851	Tupaia_belangeri
MGP_SPRETEiJ_G0023304	Mbd1	99	65.913	ENSTTRG00000015523	MBD1	98	65.913	Tursiops_truncatus
MGP_SPRETEiJ_G0023304	Mbd1	99	64.668	ENSUAMG00000004752	MBD1	98	66.505	Ursus_americanus
MGP_SPRETEiJ_G0023304	Mbd1	99	67.799	ENSUMAG00000002947	MBD1	98	68.608	Ursus_maritimus