EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0023428 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Minus strand
Length
68618 bases
Position
chr19:1588666-1657283
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0049492zf-CCHCPF00098.232.9e-0711
MGP_SPRETEiJ_P0049491zf-CCHCPF00098.233.3e-0711
MGP_SPRETEiJ_P0049492RRM_1PF00076.229.8e-1812
MGP_SPRETEiJ_P0049492RRM_1PF00076.229.8e-1822
MGP_SPRETEiJ_P0049491RRM_1PF00076.226.3e-1612
MGP_SPRETEiJ_P0049491RRM_1PF00076.226.3e-1622
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0049495-2206--- (aa)--
MGP_SPRETEiJ_T0049484-2566-MGP_SPRETEiJ_P0049484118 (aa)-UPI000154B9F1
MGP_SPRETEiJ_T0049491-1719-MGP_SPRETEiJ_P0049491343 (aa)--
MGP_SPRETEiJ_T0049493-454-MGP_SPRETEiJ_P004949318 (aa)--
MGP_SPRETEiJ_T0049492-1433-MGP_SPRETEiJ_P0049492336 (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0023428's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023428's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0023428-9031.061MGP_SPRETEiJ_G0016392Dazap17830.147
MGP_SPRETEiJ_G0023428-9470.679MGP_SPRETEiJ_G0023429-10071.296
MGP_SPRETEiJ_G0023428-10096.610MGP_SPRETEiJ_G0023431Rbm149996.610
MGP_SPRETEiJ_G0023428-94100.000MGP_SPRETEiJ_G0023430-100100.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0023428-9479.511ENSG00000173933RBM410087.013Homo_sapiens
MGP_SPRETEiJ_G0023428-10096.176ENSG00000248643RBM14-RBM410096.176Homo_sapiens
MGP_SPRETEiJ_G0023428-9470.279ENSG00000173914RBM4B9594.737Homo_sapiens
MGP_SPRETEiJ_G0023428-9470.898ENSAMEG00000010906RBM4B10070.898Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023428-9479.268ENSAMEG00000010914RBM410079.268Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023428-9470.279ENSANAG00000023478RBM4B10070.279Aotus_nancymaae
MGP_SPRETEiJ_G0023428-9541.667ENSANAG00000033986-8344.898Aotus_nancymaae
MGP_SPRETEiJ_G0023428-9471.207ENSBTAG00000000423RBM4B10071.207Bos_taurus
MGP_SPRETEiJ_G0023428-9476.308ENSBTAG00000031688RBM410075.692Bos_taurus
MGP_SPRETEiJ_G0023428-9469.969ENSCJAG00000013666RBM4B10069.969Callithrix_jacchus
MGP_SPRETEiJ_G0023428-9470.588ENSCAFG00000012378RBM4B10070.588Canis_familiaris
MGP_SPRETEiJ_G0023428-9479.268ENSCAFG00000012388RBM410079.268Canis_familiaris
MGP_SPRETEiJ_G0023428-9470.588ENSCAFG00020015519RBM4B10070.588Canis_lupus_dingo
MGP_SPRETEiJ_G0023428-9479.268ENSCAFG00020015515RBM410079.268Canis_lupus_dingo
MGP_SPRETEiJ_G0023428-9471.207ENSCHIG00000008907RBM4B10071.207Capra_hircus
MGP_SPRETEiJ_G0023428-9476.308ENSCHIG00000020613RBM410075.692Capra_hircus
MGP_SPRETEiJ_G0023428-6939.024ENSTSYG00000036168-6539.024Carlito_syrichta
MGP_SPRETEiJ_G0023428-6979.325ENSTSYG00000009580RBM4B9679.325Carlito_syrichta
MGP_SPRETEiJ_G0023428-9479.878ENSCAPG00000016600RBM410079.878Cavia_aperea
MGP_SPRETEiJ_G0023428-9470.279ENSCAPG00000009570RBM4B10070.279Cavia_aperea
MGP_SPRETEiJ_G0023428-9479.878ENSCPOG00000013194RBM410079.878Cavia_porcellus
MGP_SPRETEiJ_G0023428-9470.279ENSCPOG00000013689RBM4B10070.279Cavia_porcellus
MGP_SPRETEiJ_G0023428-9542.593ENSCCAG00000023319-8491.429Cebus_capucinus
MGP_SPRETEiJ_G0023428-9470.279ENSCCAG00000016501RBM4B10070.279Cebus_capucinus
MGP_SPRETEiJ_G0023428-9541.964ENSCCAG00000007508-9941.964Cebus_capucinus
MGP_SPRETEiJ_G0023428-9470.279ENSCATG00000035353RBM4B10070.279Cercocebus_atys
MGP_SPRETEiJ_G0023428-9479.573ENSCLAG00000014756RBM410079.573Chinchilla_lanigera
MGP_SPRETEiJ_G0023428-9470.588ENSCLAG00000015287RBM4B10070.279Chinchilla_lanigera
MGP_SPRETEiJ_G0023428-9470.279ENSCSAG00000008361RBM4B10070.279Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023428-9471.517ENSCHOG00000002892RBM4B10071.517Choloepus_hoffmanni
MGP_SPRETEiJ_G0023428-6689.474ENSCHOG00000009753RBM14-RBM410088.158Choloepus_hoffmanni
MGP_SPRETEiJ_G0023428-9654.971ENSCPBG00000023800-10054.896Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023428-9470.279ENSCANG00000021868RBM4B10070.279Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023428-9468.111ENSCGRG00001024693Rbm4b10068.731Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023428-9482.043ENSCGRG00001016609-10082.043Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023428-9482.043ENSCGRG00000010183-10082.043Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023428-9468.111ENSCGRG00000012112Rbm4b10068.731Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023428-9471.207ENSDNOG00000019500-10071.207Dasypus_novemcinctus
MGP_SPRETEiJ_G0023428-9476.524ENSDNOG00000032390RBM410075.610Dasypus_novemcinctus
MGP_SPRETEiJ_G0023428-9470.588ENSDNOG00000045639-9870.588Dasypus_novemcinctus
MGP_SPRETEiJ_G0023428-9477.846ENSDORG00000004538-10075.077Dipodomys_ordii
MGP_SPRETEiJ_G0023428-9467.802ENSDORG00000029108Rbm4b10068.421Dipodomys_ordii
MGP_SPRETEiJ_G0023428-6663.229ENSETEG00000018142-10064.126Echinops_telfairi
MGP_SPRETEiJ_G0023428-9480.247ENSEASG00005005064RBM410080.247Equus_asinus_asinus
MGP_SPRETEiJ_G0023428-9470.588ENSEASG00005005068RBM4B10070.588Equus_asinus_asinus
MGP_SPRETEiJ_G0023428-9480.247ENSECAG00000022940RBM410080.247Equus_caballus
MGP_SPRETEiJ_G0023428-9470.279ENSECAG00000022987RBM4B10070.279Equus_caballus
MGP_SPRETEiJ_G0023428-9467.683ENSEEUG00000000058RBM4B10068.598Erinaceus_europaeus
MGP_SPRETEiJ_G0023428-9479.268ENSFCAG00000029651RBM410079.268Felis_catus
MGP_SPRETEiJ_G0023428-9471.207ENSFCAG00000007394RBM4B10071.207Felis_catus
MGP_SPRETEiJ_G0023428-10045.553ENSFALG00000002073-10047.853Ficedula_albicollis
MGP_SPRETEiJ_G0023428-9476.524ENSFDAG00000005447RBM410075.610Fukomys_damarensis
MGP_SPRETEiJ_G0023428-9438.710ENSFDAG00000013661-9340.404Fukomys_damarensis
MGP_SPRETEiJ_G0023428-9470.588ENSFDAG00000015530RBM4B10070.279Fukomys_damarensis
MGP_SPRETEiJ_G0023428-10052.128ENSGALG00000037946-10055.287Gallus_gallus
MGP_SPRETEiJ_G0023428-9541.964ENSGALG00000040489-8445.455Gallus_gallus
MGP_SPRETEiJ_G0023428-10051.697ENSGAGG00000008553-10055.325Gopherus_agassizii
MGP_SPRETEiJ_G0023428-8636.634ENSGGOG00000043023-8288.462Gorilla_gorilla
MGP_SPRETEiJ_G0023428-9470.279ENSGGOG00000011698RBM4B10070.279Gorilla_gorilla
MGP_SPRETEiJ_G0023428-10051.657ENSHGLG00000002853-10057.453Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023428-9476.524ENSHGLG00000009991RBM410075.610Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023428-9460.661ENSHGLG00000000117-9560.661Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023428-9470.588ENSHGLG00000016412-10070.588Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023428-9057.843ENSHGLG00100020033-10057.843Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023428-9465.635ENSHGLG00100003854RBM410065.635Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023428-9470.370ENSHGLG00100003978-10069.753Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023428-9479.573ENSSTOG00000022811RBM410079.573Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023428-9470.588ENSSTOG00000011226RBM4B10070.588Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023428-10063.662ENSJJAG00000020870Rbm4b10066.873Jaculus_jaculus
MGP_SPRETEiJ_G0023428-8332.323ENSJJAG00000003168-9243.697Jaculus_jaculus
MGP_SPRETEiJ_G0023428-9467.391ENSLAFG00000002285RBM4B10067.183Loxodonta_africana
MGP_SPRETEiJ_G0023428-9473.780ENSLAFG00000028147-10072.866Loxodonta_africana
MGP_SPRETEiJ_G0023428-9470.279ENSMFAG00000033927RBM4B10070.279Macaca_fascicularis
MGP_SPRETEiJ_G0023428-9470.279ENSMNEG00000043371RBM4B10070.279Macaca_nemestrina
MGP_SPRETEiJ_G0023428-9470.279ENSMLEG00000028563RBM4B10070.279Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023428-9467.183ENSMAUG00000017027Rbm4b10067.492Mesocricetus_auratus
MGP_SPRETEiJ_G0023428-9541.071ENSMICG00000047975-9544.444Microcebus_murinus
MGP_SPRETEiJ_G0023428-9470.898ENSMICG00000003820RBM4B10070.898Microcebus_murinus
MGP_SPRETEiJ_G0023428-9541.935ENSMICG00000003817-9743.434Microcebus_murinus
MGP_SPRETEiJ_G0023428-9467.492ENSMOCG00000001835Rbm4b10068.111Microtus_ochrogaster
MGP_SPRETEiJ_G0023428-9470.091ENSMODG00000008056-10069.184Monodelphis_domestica
MGP_SPRETEiJ_G0023428-100100.000MGP_CAROLIEiJ_G0022514-100100.000Mus_caroli
MGP_SPRETEiJ_G0023428-9468.111MGP_CAROLIEiJ_G0022515Rbm4b10068.731Mus_caroli
MGP_SPRETEiJ_G0023428-9482.972MGP_CAROLIEiJ_G0022516-10082.972Mus_caroli
MGP_SPRETEiJ_G0023428-100100.000ENSMUSG00000096370Gm21992100100.000Mus_musculus
MGP_SPRETEiJ_G0023428-9467.802ENSMUSG00000033760Rbm4b10068.421Mus_musculus
MGP_SPRETEiJ_G0023428-9482.972ENSMUSG00000094936Rbm410082.972Mus_musculus
MGP_SPRETEiJ_G0023428-100100.000MGP_PahariEiJ_G0014011-100100.000Mus_pahari
MGP_SPRETEiJ_G0023428-9482.716MGP_PahariEiJ_G0014013-10082.716Mus_pahari
MGP_SPRETEiJ_G0023428-9467.492MGP_PahariEiJ_G0014012Rbm4b10068.111Mus_pahari
MGP_SPRETEiJ_G0023428-9479.573ENSMPUG00000003443RBM410079.573Mustela_putorius_furo
MGP_SPRETEiJ_G0023428-9471.207ENSMPUG00000003450RBM4B10071.207Mustela_putorius_furo
MGP_SPRETEiJ_G0023428-9469.659ENSMLUG00000001290RBM4B10069.040Myotis_lucifugus
MGP_SPRETEiJ_G0023428-9475.077ENSMLUG00000004076RBM49574.154Myotis_lucifugus
MGP_SPRETEiJ_G0023428-9468.111ENSNGAG00000016292Rbm4b10068.731Nannospalax_galili
MGP_SPRETEiJ_G0023428-9479.511ENSNLEG00000035021RBM410079.511Nomascus_leucogenys
MGP_SPRETEiJ_G0023428-9469.350ENSNLEG00000006213RBM4B10069.350Nomascus_leucogenys
MGP_SPRETEiJ_G0023428-9470.031ENSMEUG00000001445-10070.031Notamacropus_eugenii
MGP_SPRETEiJ_G0023428-6683.772ENSMEUG00000005739-10082.895Notamacropus_eugenii
MGP_SPRETEiJ_G0023428-9476.220ENSOPRG00000009149RBM410075.915Ochotona_princeps
MGP_SPRETEiJ_G0023428-9470.898ENSOPRG00000009158RBM4B10070.898Ochotona_princeps
MGP_SPRETEiJ_G0023428-9488.571ENSODEG00000001866-8888.571Octodon_degus
MGP_SPRETEiJ_G0023428-9469.969ENSODEG00000017696-10069.969Octodon_degus
MGP_SPRETEiJ_G0023428-9541.071ENSODEG00000019143-9941.071Octodon_degus
MGP_SPRETEiJ_G0023428-9543.548ENSODEG00000020039-9744.444Octodon_degus
MGP_SPRETEiJ_G0023428-9530.357ENSODEG00000006635-9290.625Octodon_degus
MGP_SPRETEiJ_G0023428-9659.627ENSOANG00000003143-8658.824Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023428-9467.183ENSOANG00000011036-10064.706Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023428-9470.588ENSOCUG00000006695LARK10070.588Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023428-9479.573ENSOCUG00000004731RBM410079.573Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023428-9478.963ENSOGAG00000015647RBM410078.963Otolemur_garnettii
MGP_SPRETEiJ_G0023428-9470.588ENSOGAG00000015648RBM4B10070.588Otolemur_garnettii
MGP_SPRETEiJ_G0023428-9474.154ENSOARG00000007700RBM410073.846Ovis_aries
MGP_SPRETEiJ_G0023428-9470.031ENSOARG00000007759RBM4B10070.336Ovis_aries
MGP_SPRETEiJ_G0023428-9470.279ENSPPAG00000015125RBM4B10070.279Pan_paniscus
MGP_SPRETEiJ_G0023428-9479.268ENSPPRG00000003533RBM410079.268Panthera_pardus
MGP_SPRETEiJ_G0023428-9470.898ENSPPRG00000003388RBM4B10070.898Panthera_pardus
MGP_SPRETEiJ_G0023428-9465.957ENSPTIG00000016180RBM49965.957Panthera_tigris_altaica
MGP_SPRETEiJ_G0023428-9470.898ENSPTIG00000015426RBM4B10070.898Panthera_tigris_altaica
MGP_SPRETEiJ_G0023428-9470.279ENSPTRG00000003935RBM4B10070.279Pan_troglodytes
MGP_SPRETEiJ_G0023428-9470.279ENSPANG00000020672RBM4B10070.279Papio_anubis
MGP_SPRETEiJ_G0023428-9456.287ENSPSIG00000003430-10055.488Pelodiscus_sinensis
MGP_SPRETEiJ_G0023428-9541.071ENSPSIG00000003477-9552.610Pelodiscus_sinensis
MGP_SPRETEiJ_G0023428-9468.421ENSPEMG00000009144Rbm4b10069.040Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023428-9479.511ENSPPYG00000003012RBM410079.511Pongo_abelii
MGP_SPRETEiJ_G0023428-9470.279ENSPPYG00000003010RBM4B10070.279Pongo_abelii
MGP_SPRETEiJ_G0023428-9475.305ENSPCAG00000003393-10074.085Procavia_capensis
MGP_SPRETEiJ_G0023428-9470.588ENSPCOG00000027885RBM4B10070.588Propithecus_coquereli
MGP_SPRETEiJ_G0023428-9476.524ENSPVAG00000010486RBM410075.610Pteropus_vampyrus
MGP_SPRETEiJ_G0023428-9470.898ENSPVAG00000010487RBM4B10070.898Pteropus_vampyrus
MGP_SPRETEiJ_G0023428-9481.651ENSRNOG00000050741Rbm410081.651Rattus_norvegicus
MGP_SPRETEiJ_G0023428-9468.421ENSRNOG00000061795Rbm4b10069.040Rattus_norvegicus
MGP_SPRETEiJ_G0023428-9470.279ENSRBIG00000019394RBM4B10070.279Rhinopithecus_bieti
MGP_SPRETEiJ_G0023428-9541.667ENSRROG00000032796-9047.573Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023428-9470.279ENSRROG00000032850RBM4B10070.279Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023428-9469.969ENSSBOG00000034474RBM4B10069.969Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023428-9470.279ENSSHAG00000008386-10069.969Sarcophilus_harrisii
MGP_SPRETEiJ_G0023428-9471.207ENSSARG00000010710RBM4B10070.898Sorex_araneus
MGP_SPRETEiJ_G0023428-9479.268ENSSSCG00000032437RBM410079.268Sus_scrofa
MGP_SPRETEiJ_G0023428-9542.857ENSTGUG00000016779-9451.807Taeniopygia_guttata
MGP_SPRETEiJ_G0023428-9469.040ENSTBEG00000003748RBM4B10068.731Tupaia_belangeri
MGP_SPRETEiJ_G0023428-9442.424ENSTBEG00000003727-7071.282Tupaia_belangeri
MGP_SPRETEiJ_G0023428-9470.588ENSTTRG00000011166RBM4B10070.588Tursiops_truncatus
MGP_SPRETEiJ_G0023428-9475.305ENSTTRG00000011164RBM410074.390Tursiops_truncatus
MGP_SPRETEiJ_G0023428-9479.268ENSUAMG00000014882RBM410079.268Ursus_americanus
MGP_SPRETEiJ_G0023428-9471.207ENSUAMG00000004745RBM4B10071.207Ursus_americanus
MGP_SPRETEiJ_G0023428-9541.964ENSUMAG00000011738-9746.465Ursus_maritimus
MGP_SPRETEiJ_G0023428-9475.000ENSVPAG00000001949RBM410074.390Vicugna_pacos
MGP_SPRETEiJ_G0023428-9470.898ENSVPAG00000001950RBM4B10070.898Vicugna_pacos
MGP_SPRETEiJ_G0023428-9470.588ENSVVUG00000010619RBM4B10070.588Vulpes_vulpes
MGP_SPRETEiJ_G0023428-9476.220ENSVVUG00000010622RBM410075.305Vulpes_vulpes
MGP_SPRETEiJ_G0023428-9541.964ENSVVUG00000011717-9841.964Vulpes_vulpes

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