EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023429 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 10663 bases
Position: chr19:1602258-1612920
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0049487	zf-CCHC	PF00098.23	2.8e-07	1	1
MGP_SPRETEiJ_P0049487	RRM_1	PF00076.22	4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0049486	-	3921	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0049487	-	1542	-	MGP_SPRETEiJ_P0049487	276 (aa)	-	-
MGP_SPRETEiJ_T0049485	-	1181	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0049488	-	5631	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0049489	-	407	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023429's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0023429	-	100	71.296	MGP_SPRETEiJ_G0023430	-	100	70.679
MGP_SPRETEiJ_G0023429	-	100	71.296	MGP_SPRETEiJ_G0023428	-	94	70.679

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023429	-	99	69.858	ENSG00000248643	RBM14-RBM4	77	67.972	Homo_sapiens
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSG00000173914	RBM4B	95	94.737	Homo_sapiens
MGP_SPRETEiJ_G0023429	-	100	75.694	ENSG00000173933	RBM4	100	73.868	Homo_sapiens
MGP_SPRETEiJ_G0023429	-	100	75.000	ENSAMEG00000010914	RBM4	100	74.306	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023429	-	100	88.298	ENSAMEG00000010906	RBM4B	100	85.106	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023429	-	100	87.589	ENSANAG00000023478	RBM4B	100	87.589	Aotus_nancymaae
MGP_SPRETEiJ_G0023429	-	100	75.789	ENSBTAG00000031688	RBM4	100	75.088	Bos_taurus
MGP_SPRETEiJ_G0023429	-	100	84.752	ENSBTAG00000000423	RBM4B	100	84.043	Bos_taurus
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSCJAG00000013666	RBM4B	100	84.752	Callithrix_jacchus
MGP_SPRETEiJ_G0023429	-	100	87.943	ENSCAFG00000012378	RBM4B	100	84.752	Canis_familiaris
MGP_SPRETEiJ_G0023429	-	100	75.000	ENSCAFG00000012388	RBM4	100	74.306	Canis_familiaris
MGP_SPRETEiJ_G0023429	-	100	75.000	ENSCAFG00020015515	RBM4	100	74.306	Canis_lupus_dingo
MGP_SPRETEiJ_G0023429	-	100	87.943	ENSCAFG00020015519	RBM4B	100	84.752	Canis_lupus_dingo
MGP_SPRETEiJ_G0023429	-	100	85.106	ENSCHIG00000008907	RBM4B	100	84.397	Capra_hircus
MGP_SPRETEiJ_G0023429	-	100	75.789	ENSCHIG00000020613	RBM4	100	75.088	Capra_hircus
MGP_SPRETEiJ_G0023429	-	84	88.085	ENSTSYG00000009580	RBM4B	96	87.234	Carlito_syrichta
MGP_SPRETEiJ_G0023429	-	100	74.306	ENSCAPG00000016600	RBM4	100	73.611	Cavia_aperea
MGP_SPRETEiJ_G0023429	-	100	86.170	ENSCAPG00000009570	RBM4B	100	85.461	Cavia_aperea
MGP_SPRETEiJ_G0023429	-	100	74.306	ENSCPOG00000013194	RBM4	100	73.611	Cavia_porcellus
MGP_SPRETEiJ_G0023429	-	100	86.170	ENSCPOG00000013689	RBM4B	100	85.461	Cavia_porcellus
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSCCAG00000016501	RBM4B	100	84.752	Cebus_capucinus
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSCATG00000035353	RBM4B	100	84.752	Cercocebus_atys
MGP_SPRETEiJ_G0023429	-	100	86.833	ENSCLAG00000015287	RBM4B	100	86.477	Chinchilla_lanigera
MGP_SPRETEiJ_G0023429	-	100	73.958	ENSCLAG00000014756	RBM4	100	73.264	Chinchilla_lanigera
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSCSAG00000008361	RBM4B	100	84.752	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023429	-	79	77.533	ENSCHOG00000009753	RBM14-RBM4	100	76.652	Choloepus_hoffmanni
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSCHOG00000002892	RBM4B	100	84.752	Choloepus_hoffmanni
MGP_SPRETEiJ_G0023429	-	100	61.513	ENSCPBG00000023800	-	100	60.066	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSCANG00000021868	RBM4B	100	84.752	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023429	-	100	75.618	ENSCGRG00001016609	-	100	74.912	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023429	-	100	88.929	ENSCGRG00001024693	Rbm4b	100	88.929	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023429	-	100	88.929	ENSCGRG00000012112	Rbm4b	100	88.929	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023429	-	100	75.618	ENSCGRG00000010183	-	100	74.912	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023429	-	100	86.833	ENSDNOG00000045639	-	98	84.698	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023429	-	100	87.544	ENSDNOG00000019500	-	100	85.409	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023429	-	100	74.653	ENSDNOG00000032390	RBM4	100	73.958	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023429	-	100	74.825	ENSDORG00000004538	-	100	72.982	Dipodomys_ordii
MGP_SPRETEiJ_G0023429	-	100	86.786	ENSDORG00000029108	Rbm4b	100	86.429	Dipodomys_ordii
MGP_SPRETEiJ_G0023429	-	79	70.909	ENSETEG00000018142	-	100	70.455	Echinops_telfairi
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSEASG00005005068	RBM4B	100	84.752	Equus_asinus_asinus
MGP_SPRETEiJ_G0023429	-	100	76.056	ENSEASG00005005064	RBM4	100	75.352	Equus_asinus_asinus
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSECAG00000022987	RBM4B	100	84.752	Equus_caballus
MGP_SPRETEiJ_G0023429	-	100	76.056	ENSECAG00000022940	RBM4	100	75.352	Equus_caballus
MGP_SPRETEiJ_G0023429	-	100	80.836	ENSEEUG00000000058	RBM4B	100	79.443	Erinaceus_europaeus
MGP_SPRETEiJ_G0023429	-	100	75.000	ENSFCAG00000029651	RBM4	100	74.306	Felis_catus
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSFCAG00000007394	RBM4B	100	85.461	Felis_catus
MGP_SPRETEiJ_G0023429	-	100	54.608	ENSFALG00000002073	-	100	55.844	Ficedula_albicollis
MGP_SPRETEiJ_G0023429	-	100	86.833	ENSFDAG00000015530	RBM4B	100	86.477	Fukomys_damarensis
MGP_SPRETEiJ_G0023429	-	100	73.958	ENSFDAG00000005447	RBM4	100	73.264	Fukomys_damarensis
MGP_SPRETEiJ_G0023429	-	100	63.758	ENSGALG00000037946	-	100	62.290	Gallus_gallus
MGP_SPRETEiJ_G0023429	-	100	61.184	ENSGAGG00000008553	-	100	59.736	Gopherus_agassizii
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSGGOG00000011698	RBM4B	100	84.752	Gorilla_gorilla
MGP_SPRETEiJ_G0023429	-	100	86.170	ENSHGLG00000016412	-	100	85.461	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023429	-	100	72.760	ENSHGLG00000002853	-	100	71.786	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023429	-	100	63.142	ENSHGLG00000000117	-	95	63.142	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023429	-	100	74.306	ENSHGLG00000009991	RBM4	100	73.611	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023429	-	100	88.612	ENSHGLG00100003978	-	100	88.612	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023429	-	93	74.144	ENSHGLG00100020033	-	100	73.384	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023429	-	100	65.141	ENSHGLG00100003854	RBM4	80	82.258	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023429	-	100	86.170	ENSSTOG00000011226	RBM4B	100	85.461	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023429	-	100	74.653	ENSSTOG00000022811	RBM4	100	73.958	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023429	-	100	86.786	ENSJJAG00000020870	Rbm4b	100	86.786	Jaculus_jaculus
MGP_SPRETEiJ_G0023429	-	100	73.264	ENSLAFG00000028147	-	100	72.598	Loxodonta_africana
MGP_SPRETEiJ_G0023429	-	100	80.142	ENSLAFG00000002285	RBM4B	100	80.142	Loxodonta_africana
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSMFAG00000033927	RBM4B	100	84.752	Macaca_fascicularis
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSMNEG00000043371	RBM4B	100	84.752	Macaca_nemestrina
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSMLEG00000028563	RBM4B	100	84.752	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023429	-	100	87.857	ENSMAUG00000017027	Rbm4b	100	87.500	Mesocricetus_auratus
MGP_SPRETEiJ_G0023429	-	100	87.589	ENSMICG00000003820	RBM4B	100	84.397	Microcebus_murinus
MGP_SPRETEiJ_G0023429	-	100	90.000	ENSMOCG00000001835	Rbm4b	100	90.000	Microtus_ochrogaster
MGP_SPRETEiJ_G0023429	-	100	73.540	ENSMODG00000008056	-	100	73.196	Monodelphis_domestica
MGP_SPRETEiJ_G0023429	-	100	91.786	MGP_CAROLIEiJ_G0022515	Rbm4b	100	91.786	Mus_caroli
MGP_SPRETEiJ_G0023429	-	99	69.784	MGP_CAROLIEiJ_G0022514	-	76	69.065	Mus_caroli
MGP_SPRETEiJ_G0023429	-	100	76.056	MGP_CAROLIEiJ_G0022516	-	100	75.352	Mus_caroli
MGP_SPRETEiJ_G0023429	-	100	75.352	ENSMUSG00000094936	Rbm4	100	78.723	Mus_musculus
MGP_SPRETEiJ_G0023429	-	100	75.618	ENSMUSG00000096370	Gm21992	76	74.648	Mus_musculus
MGP_SPRETEiJ_G0023429	-	100	92.143	ENSMUSG00000033760	Rbm4b	100	92.143	Mus_musculus
MGP_SPRETEiJ_G0023429	-	100	91.786	MGP_PahariEiJ_G0014012	Rbm4b	100	91.786	Mus_pahari
MGP_SPRETEiJ_G0023429	-	100	75.088	MGP_PahariEiJ_G0014013	-	100	74.386	Mus_pahari
MGP_SPRETEiJ_G0023429	-	100	75.088	MGP_PahariEiJ_G0014011	-	100	74.386	Mus_pahari
MGP_SPRETEiJ_G0023429	-	100	74.653	ENSMPUG00000003443	RBM4	100	73.958	Mustela_putorius_furo
MGP_SPRETEiJ_G0023429	-	100	87.943	ENSMPUG00000003450	RBM4B	100	84.752	Mustela_putorius_furo
MGP_SPRETEiJ_G0023429	-	100	84.643	ENSMLUG00000001290	RBM4B	100	83.929	Myotis_lucifugus
MGP_SPRETEiJ_G0023429	-	99	72.982	ENSMLUG00000004076	RBM4	95	72.281	Myotis_lucifugus
MGP_SPRETEiJ_G0023429	-	100	89.643	ENSNGAG00000016292	Rbm4b	100	89.643	Nannospalax_galili
MGP_SPRETEiJ_G0023429	-	100	75.694	ENSNLEG00000035021	RBM4	100	73.868	Nomascus_leucogenys
MGP_SPRETEiJ_G0023429	-	100	85.106	ENSNLEG00000006213	RBM4B	100	84.397	Nomascus_leucogenys
MGP_SPRETEiJ_G0023429	-	100	76.923	ENSMEUG00000001445	-	100	76.573	Notamacropus_eugenii
MGP_SPRETEiJ_G0023429	-	79	78.855	ENSMEUG00000005739	-	100	77.974	Notamacropus_eugenii
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSOPRG00000009158	RBM4B	100	84.752	Ochotona_princeps
MGP_SPRETEiJ_G0023429	-	100	75.347	ENSOPRG00000009149	RBM4	100	74.653	Ochotona_princeps
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSODEG00000017696	-	100	84.752	Octodon_degus
MGP_SPRETEiJ_G0023429	-	100	60.284	ENSODEG00000001866	-	100	60.071	Octodon_degus
MGP_SPRETEiJ_G0023429	-	100	65.950	ENSOANG00000003143	-	84	64.413	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023429	-	100	75.445	ENSOANG00000011036	-	100	74.733	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023429	-	100	86.170	ENSOCUG00000006695	LARK	100	85.461	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023429	-	100	74.653	ENSOCUG00000004731	RBM4	100	73.958	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023429	-	100	75.433	ENSOGAG00000015647	RBM4	100	73.264	Otolemur_garnettii
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSOGAG00000015648	RBM4B	100	85.106	Otolemur_garnettii
MGP_SPRETEiJ_G0023429	-	100	74.386	ENSOARG00000007700	RBM4	100	73.684	Ovis_aries
MGP_SPRETEiJ_G0023429	-	100	83.916	ENSOARG00000007759	RBM4B	100	84.965	Ovis_aries
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSPPAG00000015125	RBM4B	100	84.752	Pan_paniscus
MGP_SPRETEiJ_G0023429	-	100	85.106	ENSPPRG00000003388	RBM4B	100	85.106	Panthera_pardus
MGP_SPRETEiJ_G0023429	-	100	75.000	ENSPPRG00000003533	RBM4	100	74.306	Panthera_pardus
MGP_SPRETEiJ_G0023429	-	100	85.106	ENSPTIG00000015426	RBM4B	100	85.106	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023429	-	100	66.316	ENSPTIG00000016180	RBM4	100	63.158	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSPTRG00000003935	RBM4B	100	84.752	Pan_troglodytes
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSPANG00000020672	RBM4B	100	84.752	Papio_anubis
MGP_SPRETEiJ_G0023429	-	71	65.877	ENSPSIG00000003477	-	93	63.981	Pelodiscus_sinensis
MGP_SPRETEiJ_G0023429	-	100	63.051	ENSPSIG00000003430	-	100	61.565	Pelodiscus_sinensis
MGP_SPRETEiJ_G0023429	-	100	87.900	ENSPEMG00000009144	Rbm4b	100	88.256	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSPPYG00000003010	RBM4B	100	84.752	Pongo_abelii
MGP_SPRETEiJ_G0023429	-	100	75.694	ENSPPYG00000003012	RBM4	100	73.868	Pongo_abelii
MGP_SPRETEiJ_G0023429	-	100	75.347	ENSPCAG00000003393	-	100	74.653	Procavia_capensis
MGP_SPRETEiJ_G0023429	-	100	84.397	ENSPCOG00000027885	RBM4B	100	83.688	Propithecus_coquereli
MGP_SPRETEiJ_G0023429	-	100	85.106	ENSPVAG00000010487	RBM4B	100	84.397	Pteropus_vampyrus
MGP_SPRETEiJ_G0023429	-	100	74.653	ENSPVAG00000010486	RBM4	100	73.958	Pteropus_vampyrus
MGP_SPRETEiJ_G0023429	-	100	91.429	ENSRNOG00000061795	Rbm4b	100	91.429	Rattus_norvegicus
MGP_SPRETEiJ_G0023429	-	100	74.306	ENSRNOG00000050741	Rbm4	100	73.611	Rattus_norvegicus
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSRBIG00000019394	RBM4B	100	84.752	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSRROG00000032850	RBM4B	100	84.752	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSSBOG00000034474	RBM4B	100	84.752	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023429	-	100	76.512	ENSSHAG00000008386	-	100	76.157	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023429	-	100	85.053	ENSSARG00000010710	RBM4B	100	84.698	Sorex_araneus
MGP_SPRETEiJ_G0023429	-	100	75.000	ENSSSCG00000032437	RBM4	100	74.306	Sus_scrofa
MGP_SPRETEiJ_G0023429	-	72	64.651	ENSTGUG00000016779	-	92	63.981	Taeniopygia_guttata
MGP_SPRETEiJ_G0023429	-	54	78.846	ENSTBEG00000003727	-	68	79.195	Tupaia_belangeri
MGP_SPRETEiJ_G0023429	-	100	87.857	ENSTBEG00000003748	RBM4B	100	87.857	Tupaia_belangeri
MGP_SPRETEiJ_G0023429	-	100	74.306	ENSTTRG00000011164	RBM4	100	73.611	Tursiops_truncatus
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSTTRG00000011166	RBM4B	100	84.752	Tursiops_truncatus
MGP_SPRETEiJ_G0023429	-	100	75.000	ENSUAMG00000014882	RBM4	100	74.306	Ursus_americanus
MGP_SPRETEiJ_G0023429	-	100	87.943	ENSUAMG00000004745	RBM4B	100	84.752	Ursus_americanus
MGP_SPRETEiJ_G0023429	-	55	80.892	ENSUMAG00000011738	-	97	66.667	Ursus_maritimus
MGP_SPRETEiJ_G0023429	-	100	74.653	ENSVPAG00000001949	RBM4	100	73.958	Vicugna_pacos
MGP_SPRETEiJ_G0023429	-	100	85.461	ENSVPAG00000001950	RBM4B	100	84.752	Vicugna_pacos
MGP_SPRETEiJ_G0023429	-	100	74.306	ENSVVUG00000010622	RBM4	100	73.611	Vulpes_vulpes
MGP_SPRETEiJ_G0023429	-	100	87.943	ENSVVUG00000010619	RBM4B	100	84.752	Vulpes_vulpes