EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023430 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 9466 bases
Position: chr19:1629760-1639225
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0049490	zf-CCHC	PF00098.23	3.1e-07	1	1
MGP_SPRETEiJ_P0049490	RRM_1	PF00076.22	5.3e-16	1	2
MGP_SPRETEiJ_P0049490	RRM_1	PF00076.22	5.3e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0049494	-	2713	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0049490	-	2486	-	MGP_SPRETEiJ_P0049490	324 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0023430	-	100	70.679	MGP_SPRETEiJ_G0023429	-	100	71.296
MGP_SPRETEiJ_G0023430	-	100	100.000	MGP_SPRETEiJ_G0023428	-	94	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023430	-	100	79.511	ENSG00000173933	RBM4	100	87.013	Homo_sapiens
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSG00000173914	RBM4B	95	94.737	Homo_sapiens
MGP_SPRETEiJ_G0023430	-	99	71.779	ENSG00000248643	RBM14-RBM4	77	69.018	Homo_sapiens
MGP_SPRETEiJ_G0023430	-	100	79.268	ENSAMEG00000010914	RBM4	100	79.268	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023430	-	100	70.898	ENSAMEG00000010906	RBM4B	100	70.898	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSANAG00000023478	RBM4B	100	70.279	Aotus_nancymaae
MGP_SPRETEiJ_G0023430	-	100	71.207	ENSBTAG00000000423	RBM4B	100	71.207	Bos_taurus
MGP_SPRETEiJ_G0023430	-	100	76.308	ENSBTAG00000031688	RBM4	100	75.692	Bos_taurus
MGP_SPRETEiJ_G0023430	-	100	69.969	ENSCJAG00000013666	RBM4B	100	69.969	Callithrix_jacchus
MGP_SPRETEiJ_G0023430	-	100	79.268	ENSCAFG00000012388	RBM4	100	79.268	Canis_familiaris
MGP_SPRETEiJ_G0023430	-	100	70.588	ENSCAFG00000012378	RBM4B	100	70.588	Canis_familiaris
MGP_SPRETEiJ_G0023430	-	100	79.268	ENSCAFG00020015515	RBM4	100	79.268	Canis_lupus_dingo
MGP_SPRETEiJ_G0023430	-	100	70.588	ENSCAFG00020015519	RBM4B	100	70.588	Canis_lupus_dingo
MGP_SPRETEiJ_G0023430	-	100	76.308	ENSCHIG00000020613	RBM4	100	75.692	Capra_hircus
MGP_SPRETEiJ_G0023430	-	100	71.207	ENSCHIG00000008907	RBM4B	100	71.207	Capra_hircus
MGP_SPRETEiJ_G0023430	-	73	79.325	ENSTSYG00000009580	RBM4B	96	79.325	Carlito_syrichta
MGP_SPRETEiJ_G0023430	-	100	79.878	ENSCAPG00000016600	RBM4	100	79.878	Cavia_aperea
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSCAPG00000009570	RBM4B	100	70.279	Cavia_aperea
MGP_SPRETEiJ_G0023430	-	100	79.878	ENSCPOG00000013194	RBM4	100	79.878	Cavia_porcellus
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSCPOG00000013689	RBM4B	100	70.279	Cavia_porcellus
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSCCAG00000016501	RBM4B	100	70.279	Cebus_capucinus
MGP_SPRETEiJ_G0023430	-	50	50.267	ENSCCAG00000023319	-	84	91.429	Cebus_capucinus
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSCATG00000035353	RBM4B	100	70.279	Cercocebus_atys
MGP_SPRETEiJ_G0023430	-	100	70.588	ENSCLAG00000015287	RBM4B	100	70.279	Chinchilla_lanigera
MGP_SPRETEiJ_G0023430	-	100	79.573	ENSCLAG00000014756	RBM4	100	79.573	Chinchilla_lanigera
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSCSAG00000008361	RBM4B	100	70.279	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023430	-	100	71.517	ENSCHOG00000002892	RBM4B	100	71.517	Choloepus_hoffmanni
MGP_SPRETEiJ_G0023430	-	69	89.474	ENSCHOG00000009753	RBM14-RBM4	100	88.158	Choloepus_hoffmanni
MGP_SPRETEiJ_G0023430	-	100	55.394	ENSCPBG00000023800	-	100	54.896	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSCANG00000021868	RBM4B	100	70.279	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023430	-	100	82.043	ENSCGRG00001016609	-	100	82.043	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023430	-	100	68.111	ENSCGRG00001024693	Rbm4b	100	68.731	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023430	-	100	82.043	ENSCGRG00000010183	-	100	82.043	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023430	-	100	68.111	ENSCGRG00000012112	Rbm4b	100	68.731	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023430	-	100	71.207	ENSDNOG00000019500	-	100	71.207	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023430	-	100	70.588	ENSDNOG00000045639	-	98	70.588	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023430	-	100	76.524	ENSDNOG00000032390	RBM4	100	75.610	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023430	-	100	77.846	ENSDORG00000004538	-	100	75.077	Dipodomys_ordii
MGP_SPRETEiJ_G0023430	-	100	67.802	ENSDORG00000029108	Rbm4b	100	68.421	Dipodomys_ordii
MGP_SPRETEiJ_G0023430	-	69	63.229	ENSETEG00000018142	-	100	64.126	Echinops_telfairi
MGP_SPRETEiJ_G0023430	-	100	80.247	ENSEASG00005005064	RBM4	100	80.247	Equus_asinus_asinus
MGP_SPRETEiJ_G0023430	-	100	70.588	ENSEASG00005005068	RBM4B	100	70.588	Equus_asinus_asinus
MGP_SPRETEiJ_G0023430	-	100	80.247	ENSECAG00000022940	RBM4	100	80.247	Equus_caballus
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSECAG00000022987	RBM4B	100	70.279	Equus_caballus
MGP_SPRETEiJ_G0023430	-	100	67.683	ENSEEUG00000000058	RBM4B	100	67.683	Erinaceus_europaeus
MGP_SPRETEiJ_G0023430	-	100	79.268	ENSFCAG00000029651	RBM4	100	79.268	Felis_catus
MGP_SPRETEiJ_G0023430	-	100	71.207	ENSFCAG00000007394	RBM4B	100	71.207	Felis_catus
MGP_SPRETEiJ_G0023430	-	100	50.151	ENSFALG00000002073	-	100	47.853	Ficedula_albicollis
MGP_SPRETEiJ_G0023430	-	100	76.524	ENSFDAG00000005447	RBM4	100	75.610	Fukomys_damarensis
MGP_SPRETEiJ_G0023430	-	100	70.588	ENSFDAG00000015530	RBM4B	100	70.279	Fukomys_damarensis
MGP_SPRETEiJ_G0023430	-	100	57.270	ENSGALG00000037946	-	100	55.287	Gallus_gallus
MGP_SPRETEiJ_G0023430	-	100	56.686	ENSGAGG00000008553	-	100	55.325	Gopherus_agassizii
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSGGOG00000011698	RBM4B	100	70.279	Gorilla_gorilla
MGP_SPRETEiJ_G0023430	-	100	60.661	ENSHGLG00000000117	-	95	60.661	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023430	-	100	76.524	ENSHGLG00000009991	RBM4	100	75.610	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023430	-	100	70.588	ENSHGLG00000016412	-	100	70.588	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023430	-	100	57.453	ENSHGLG00000002853	-	100	57.453	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023430	-	95	57.843	ENSHGLG00100020033	-	100	57.843	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023430	-	100	70.370	ENSHGLG00100003978	-	100	69.753	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023430	-	100	65.635	ENSHGLG00100003854	RBM4	100	65.635	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023430	-	100	70.588	ENSSTOG00000011226	RBM4B	100	70.588	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023430	-	100	79.573	ENSSTOG00000022811	RBM4	100	79.573	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023430	-	100	67.492	ENSJJAG00000020870	Rbm4b	100	66.873	Jaculus_jaculus
MGP_SPRETEiJ_G0023430	-	100	73.780	ENSLAFG00000028147	-	100	72.866	Loxodonta_africana
MGP_SPRETEiJ_G0023430	-	100	67.391	ENSLAFG00000002285	RBM4B	100	67.183	Loxodonta_africana
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSMFAG00000033927	RBM4B	100	70.279	Macaca_fascicularis
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSMNEG00000043371	RBM4B	100	70.279	Macaca_nemestrina
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSMLEG00000028563	RBM4B	100	70.279	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023430	-	100	67.183	ENSMAUG00000017027	Rbm4b	100	67.492	Mesocricetus_auratus
MGP_SPRETEiJ_G0023430	-	100	70.898	ENSMICG00000003820	RBM4B	100	70.898	Microcebus_murinus
MGP_SPRETEiJ_G0023430	-	100	67.492	ENSMOCG00000001835	Rbm4b	100	68.111	Microtus_ochrogaster
MGP_SPRETEiJ_G0023430	-	100	70.091	ENSMODG00000008056	-	100	69.184	Monodelphis_domestica
MGP_SPRETEiJ_G0023430	-	100	82.972	MGP_CAROLIEiJ_G0022516	-	100	82.972	Mus_caroli
MGP_SPRETEiJ_G0023430	-	100	68.111	MGP_CAROLIEiJ_G0022515	Rbm4b	100	68.731	Mus_caroli
MGP_SPRETEiJ_G0023430	-	99	65.867	MGP_CAROLIEiJ_G0022514	-	76	75.155	Mus_caroli
MGP_SPRETEiJ_G0023430	-	100	83.230	ENSMUSG00000096370	Gm21992	76	83.230	Mus_musculus
MGP_SPRETEiJ_G0023430	-	100	82.972	ENSMUSG00000094936	Rbm4	100	82.972	Mus_musculus
MGP_SPRETEiJ_G0023430	-	100	67.802	ENSMUSG00000033760	Rbm4b	100	68.421	Mus_musculus
MGP_SPRETEiJ_G0023430	-	100	82.716	MGP_PahariEiJ_G0014011	-	100	82.716	Mus_pahari
MGP_SPRETEiJ_G0023430	-	100	67.492	MGP_PahariEiJ_G0014012	Rbm4b	100	68.111	Mus_pahari
MGP_SPRETEiJ_G0023430	-	100	82.716	MGP_PahariEiJ_G0014013	-	100	82.716	Mus_pahari
MGP_SPRETEiJ_G0023430	-	100	71.207	ENSMPUG00000003450	RBM4B	100	71.207	Mustela_putorius_furo
MGP_SPRETEiJ_G0023430	-	100	79.573	ENSMPUG00000003443	RBM4	100	79.573	Mustela_putorius_furo
MGP_SPRETEiJ_G0023430	-	100	69.659	ENSMLUG00000001290	RBM4B	100	69.040	Myotis_lucifugus
MGP_SPRETEiJ_G0023430	-	99	75.077	ENSMLUG00000004076	RBM4	95	74.154	Myotis_lucifugus
MGP_SPRETEiJ_G0023430	-	100	68.111	ENSNGAG00000016292	Rbm4b	100	68.731	Nannospalax_galili
MGP_SPRETEiJ_G0023430	-	100	79.511	ENSNLEG00000035021	RBM4	100	79.511	Nomascus_leucogenys
MGP_SPRETEiJ_G0023430	-	100	69.350	ENSNLEG00000006213	RBM4B	100	69.350	Nomascus_leucogenys
MGP_SPRETEiJ_G0023430	-	69	83.772	ENSMEUG00000005739	-	100	82.895	Notamacropus_eugenii
MGP_SPRETEiJ_G0023430	-	100	70.031	ENSMEUG00000001445	-	100	70.031	Notamacropus_eugenii
MGP_SPRETEiJ_G0023430	-	100	76.220	ENSOPRG00000009149	RBM4	100	75.915	Ochotona_princeps
MGP_SPRETEiJ_G0023430	-	100	70.898	ENSOPRG00000009158	RBM4B	100	70.898	Ochotona_princeps
MGP_SPRETEiJ_G0023430	-	100	69.969	ENSODEG00000017696	-	100	69.969	Octodon_degus
MGP_SPRETEiJ_G0023430	-	100	88.571	ENSODEG00000001866	-	88	88.571	Octodon_degus
MGP_SPRETEiJ_G0023430	-	100	67.183	ENSOANG00000011036	-	100	64.706	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023430	-	100	59.627	ENSOANG00000003143	-	84	59.006	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023430	-	100	79.573	ENSOCUG00000004731	RBM4	100	79.573	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023430	-	100	70.588	ENSOCUG00000006695	LARK	100	70.588	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023430	-	100	70.807	ENSOGAG00000015648	RBM4B	100	70.588	Otolemur_garnettii
MGP_SPRETEiJ_G0023430	-	100	78.963	ENSOGAG00000015647	RBM4	100	78.963	Otolemur_garnettii
MGP_SPRETEiJ_G0023430	-	100	74.154	ENSOARG00000007700	RBM4	100	73.846	Ovis_aries
MGP_SPRETEiJ_G0023430	-	100	70.031	ENSOARG00000007759	RBM4B	100	70.336	Ovis_aries
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSPPAG00000015125	RBM4B	100	70.279	Pan_paniscus
MGP_SPRETEiJ_G0023430	-	100	70.898	ENSPPRG00000003388	RBM4B	100	70.898	Panthera_pardus
MGP_SPRETEiJ_G0023430	-	100	79.268	ENSPPRG00000003533	RBM4	100	79.268	Panthera_pardus
MGP_SPRETEiJ_G0023430	-	100	70.898	ENSPTIG00000015426	RBM4B	100	70.898	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023430	-	100	65.957	ENSPTIG00000016180	RBM4	99	65.957	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSPTRG00000003935	RBM4B	100	70.279	Pan_troglodytes
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSPANG00000020672	RBM4B	100	70.279	Papio_anubis
MGP_SPRETEiJ_G0023430	-	74	54.000	ENSPSIG00000003477	-	94	52.823	Pelodiscus_sinensis
MGP_SPRETEiJ_G0023430	-	100	56.287	ENSPSIG00000003430	-	100	55.488	Pelodiscus_sinensis
MGP_SPRETEiJ_G0023430	-	100	68.421	ENSPEMG00000009144	Rbm4b	100	69.040	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023430	-	100	79.511	ENSPPYG00000003012	RBM4	100	79.511	Pongo_abelii
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSPPYG00000003010	RBM4B	100	70.279	Pongo_abelii
MGP_SPRETEiJ_G0023430	-	100	75.305	ENSPCAG00000003393	-	100	74.085	Procavia_capensis
MGP_SPRETEiJ_G0023430	-	100	70.588	ENSPCOG00000027885	RBM4B	100	70.588	Propithecus_coquereli
MGP_SPRETEiJ_G0023430	-	100	70.898	ENSPVAG00000010487	RBM4B	100	70.898	Pteropus_vampyrus
MGP_SPRETEiJ_G0023430	-	100	76.524	ENSPVAG00000010486	RBM4	100	75.610	Pteropus_vampyrus
MGP_SPRETEiJ_G0023430	-	100	68.421	ENSRNOG00000061795	Rbm4b	100	69.040	Rattus_norvegicus
MGP_SPRETEiJ_G0023430	-	100	81.651	ENSRNOG00000050741	Rbm4	100	81.651	Rattus_norvegicus
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSRBIG00000019394	RBM4B	100	70.279	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSRROG00000032850	RBM4B	100	70.279	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023430	-	100	69.969	ENSSBOG00000034474	RBM4B	100	69.969	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023430	-	100	70.279	ENSSHAG00000008386	-	100	69.969	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023430	-	100	71.207	ENSSARG00000010710	RBM4B	100	70.898	Sorex_araneus
MGP_SPRETEiJ_G0023430	-	100	79.268	ENSSSCG00000032437	RBM4	100	79.268	Sus_scrofa
MGP_SPRETEiJ_G0023430	-	76	54.724	ENSTGUG00000016779	-	94	52.016	Taeniopygia_guttata
MGP_SPRETEiJ_G0023430	-	60	71.282	ENSTBEG00000003727	-	70	71.282	Tupaia_belangeri
MGP_SPRETEiJ_G0023430	-	100	69.040	ENSTBEG00000003748	RBM4B	100	68.731	Tupaia_belangeri
MGP_SPRETEiJ_G0023430	-	100	70.588	ENSTTRG00000011166	RBM4B	100	70.588	Tursiops_truncatus
MGP_SPRETEiJ_G0023430	-	100	75.305	ENSTTRG00000011164	RBM4	100	74.390	Tursiops_truncatus
MGP_SPRETEiJ_G0023430	-	100	79.268	ENSUAMG00000014882	RBM4	100	79.268	Ursus_americanus
MGP_SPRETEiJ_G0023430	-	100	71.207	ENSUAMG00000004745	RBM4B	100	71.207	Ursus_americanus
MGP_SPRETEiJ_G0023430	-	61	71.939	ENSUMAG00000011738	-	97	46.465	Ursus_maritimus
MGP_SPRETEiJ_G0023430	-	100	75.000	ENSVPAG00000001949	RBM4	100	74.390	Vicugna_pacos
MGP_SPRETEiJ_G0023430	-	100	70.898	ENSVPAG00000001950	RBM4B	100	70.898	Vicugna_pacos
MGP_SPRETEiJ_G0023430	-	100	70.588	ENSVVUG00000010619	RBM4B	100	70.588	Vulpes_vulpes
MGP_SPRETEiJ_G0023430	-	100	76.220	ENSVVUG00000010622	RBM4	100	75.305	Vulpes_vulpes