EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023453 (Gene tree)
Gene ID: -
Gene Symbol: Sf3b2
Alias: 145kDa|2610311M13Rik|2810441F20Rik|B230398H18Rik|SAP145|SF3b1|SF3b145|SF3b150
Full Name: splicing factor 3b%2C subunit 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 24720 bases
Position: chr19:2155407-2180126
Accession: 2441856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0049545	DUF382	PF04037.13	2.1e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0049545	-	3227	-	MGP_SPRETEiJ_P0049545	878 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023453's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023453's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.608	ENSG00000087365	SF3B2	99	99.683	Homo_sapiens
MGP_SPRETEiJ_G0023453	Sf3b2	95	68.677	ENSAPOG00000001974	sf3b2	80	73.895	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.667	ENSAMEG00000017206	SF3B2	100	95.667	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023453	Sf3b2	97	67.543	ENSACIG00000000624	sf3b2	87	73.856	Amphilophus_citrinellus
MGP_SPRETEiJ_G0023453	Sf3b2	97	69.422	ENSAOCG00000009207	sf3b2	84	74.635	Amphiprion_ocellaris
MGP_SPRETEiJ_G0023453	Sf3b2	97	69.309	ENSAPEG00000002762	sf3b2	85	72.836	Amphiprion_percula
MGP_SPRETEiJ_G0023453	Sf3b2	100	65.427	ENSACAG00000008615	SF3B2	100	66.593	Anolis_carolinensis
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.725	ENSANAG00000029120	SF3B2	100	97.725	Aotus_nancymaae
MGP_SPRETEiJ_G0023453	Sf3b2	86	72.000	ENSACLG00000014771	sf3b2	97	67.857	Astatotilapia_calliptera
MGP_SPRETEiJ_G0023453	Sf3b2	84	71.001	ENSAMXG00000007929	sf3b2	86	77.188	Astyanax_mexicanus
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.662	ENSBTAG00000002778	SF3B2	100	95.662	Bos_taurus
MGP_SPRETEiJ_G0023453	Sf3b2	60	50.532	WBGene00021004	sftb-2	89	51.825	Caenorhabditis_elegans
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.838	ENSCJAG00000001656	SF3B2	100	97.838	Callithrix_jacchus
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.768	ENSCAFG00000013033	SF3B2	100	95.768	Canis_familiaris
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.768	ENSCAFG00020015382	SF3B2	100	95.768	Canis_lupus_dingo
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.768	ENSCHIG00000011211	SF3B2	100	95.768	Capra_hircus
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.836	ENSTSYG00000000959	SF3B2	100	97.836	Carlito_syrichta
MGP_SPRETEiJ_G0023453	Sf3b2	61	95.789	ENSCAPG00000006065	SF3B2	93	100.000	Cavia_aperea
MGP_SPRETEiJ_G0023453	Sf3b2	91	96.859	ENSCPOG00000008294	SF3B2	100	96.859	Cavia_porcellus
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.838	ENSCCAG00000035256	SF3B2	100	97.838	Cebus_capucinus
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.722	ENSCATG00000042240	SF3B2	100	97.722	Cercocebus_atys
MGP_SPRETEiJ_G0023453	Sf3b2	100	98.064	ENSCLAG00000016852	SF3B2	100	98.064	Chinchilla_lanigera
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.866	ENSCSAG00000008121	SF3B2	100	95.866	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023453	Sf3b2	91	99.485	ENSCHOG00000001476	SF3B2	77	91.237	Choloepus_hoffmanni
MGP_SPRETEiJ_G0023453	Sf3b2	85	82.422	ENSCPBG00000022465	SF3B2	87	88.245	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023453	Sf3b2	73	59.568	ENSCING00000005665	-	99	60.220	Ciona_intestinalis
MGP_SPRETEiJ_G0023453	Sf3b2	61	67.225	ENSCSAVG00000002029	-	84	66.294	Ciona_savignyi
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.722	ENSCANG00000039680	SF3B2	100	97.722	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023453	Sf3b2	100	99.317	ENSCGRG00001015741	Sf3b2	100	99.317	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023453	Sf3b2	100	99.317	ENSCGRG00000018110	Sf3b2	100	99.317	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023453	Sf3b2	74	75.610	ENSCSEG00000000230	sf3b2	78	77.603	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0023453	Sf3b2	97	68.409	ENSCVAG00000003357	sf3b2	85	74.668	Cyprinodon_variegatus
MGP_SPRETEiJ_G0023453	Sf3b2	82	73.842	ENSDARG00000018049	sf3b2	86	73.541	Danio_rerio
MGP_SPRETEiJ_G0023453	Sf3b2	100	94.209	ENSDNOG00000009484	SF3B2	100	94.209	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.725	ENSDORG00000002495	Sf3b2	100	97.725	Dipodomys_ordii
MGP_SPRETEiJ_G0023453	Sf3b2	84	88.889	ENSETEG00000020284	SF3B2	85	88.759	Echinops_telfairi
MGP_SPRETEiJ_G0023453	Sf3b2	98	57.421	ENSEBUG00000013703	sf3b2	99	59.430	Eptatretus_burgeri
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.328	ENSEASG00005004508	SF3B2	100	95.328	Equus_asinus_asinus
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.328	ENSECAG00000024461	SF3B2	100	95.328	Equus_caballus
MGP_SPRETEiJ_G0023453	Sf3b2	62	100.000	ENSEEUG00000014278	-	60	100.000	Erinaceus_europaeus
MGP_SPRETEiJ_G0023453	Sf3b2	97	65.217	ENSELUG00000005586	sf3b2	84	72.520	Esox_lucius
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.730	ENSFCAG00000013289	SF3B2	100	97.730	Felis_catus
MGP_SPRETEiJ_G0023453	Sf3b2	80	70.663	ENSFALG00000014653	SF3B2	98	69.252	Ficedula_albicollis
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.282	ENSFDAG00000019806	SF3B2	100	97.282	Fukomys_damarensis
MGP_SPRETEiJ_G0023453	Sf3b2	84	71.937	ENSFHEG00000020968	sf3b2	86	73.448	Fundulus_heteroclitus
MGP_SPRETEiJ_G0023453	Sf3b2	74	77.828	ENSGMOG00000012131	sf3b2	96	80.787	Gadus_morhua
MGP_SPRETEiJ_G0023453	Sf3b2	97	68.565	ENSGAFG00000001675	sf3b2	86	73.254	Gambusia_affinis
MGP_SPRETEiJ_G0023453	Sf3b2	74	79.027	ENSGACG00000019012	sf3b2	96	80.635	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0023453	Sf3b2	100	80.813	ENSGAGG00000023916	SF3B2	86	85.408	Gopherus_agassizii
MGP_SPRETEiJ_G0023453	Sf3b2	100	96.602	ENSGGOG00000028448	SF3B2	100	99.717	Gorilla_gorilla
MGP_SPRETEiJ_G0023453	Sf3b2	86	72.000	ENSHBUG00000017349	sf3b2	97	67.857	Haplochromis_burtoni
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.950	ENSHGLG00000010807	SF3B2	100	97.950	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.950	ENSHGLG00100006361	SF3B2	100	97.950	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023453	Sf3b2	97	65.385	ENSHCOG00000016203	sf3b2	97	63.964	Hippocampus_comes
MGP_SPRETEiJ_G0023453	Sf3b2	97	65.986	ENSIPUG00000009383	sf3b2	83	71.102	Ictalurus_punctatus
MGP_SPRETEiJ_G0023453	Sf3b2	100	98.633	ENSSTOG00000028892	SF3B2	100	98.633	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023453	Sf3b2	100	98.297	ENSJJAG00000018193	Sf3b2	100	98.297	Jaculus_jaculus
MGP_SPRETEiJ_G0023453	Sf3b2	60	88.158	ENSKMAG00000020181	sf3b2	83	73.861	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0023453	Sf3b2	97	68.800	ENSLBEG00000027739	sf3b2	88	78.425	Labrus_bergylta
MGP_SPRETEiJ_G0023453	Sf3b2	79	81.034	ENSLACG00000010429	SF3B2	93	74.264	Latimeria_chalumnae
MGP_SPRETEiJ_G0023453	Sf3b2	100	96.935	ENSLAFG00000002128	SF3B2	100	96.935	Loxodonta_africana
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.611	ENSMFAG00000003064	SF3B2	100	97.611	Macaca_fascicularis
MGP_SPRETEiJ_G0023453	Sf3b2	100	93.280	ENSMMUG00000011743	SF3B2	100	93.280	Macaca_mulatta
MGP_SPRETEiJ_G0023453	Sf3b2	100	96.384	ENSMNEG00000034437	SF3B2	100	96.384	Macaca_nemestrina
MGP_SPRETEiJ_G0023453	Sf3b2	100	96.271	ENSMLEG00000029373	SF3B2	100	96.271	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023453	Sf3b2	84	73.196	ENSMAMG00000014103	sf3b2	86	73.333	Mastacembelus_armatus
MGP_SPRETEiJ_G0023453	Sf3b2	86	72.000	ENSMZEG00005020789	sf3b2	84	73.838	Maylandia_zebra
MGP_SPRETEiJ_G0023453	Sf3b2	64	99.024	ENSMAUG00000017040	Sf3b2	100	99.024	Mesocricetus_auratus
MGP_SPRETEiJ_G0023453	Sf3b2	100	92.196	ENSMICG00000016942	-	97	92.085	Microcebus_murinus
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.494	ENSMICG00000008565	-	100	97.494	Microcebus_murinus
MGP_SPRETEiJ_G0023453	Sf3b2	100	99.203	ENSMOCG00000003136	Sf3b2	100	99.203	Microtus_ochrogaster
MGP_SPRETEiJ_G0023453	Sf3b2	97	65.840	ENSMMOG00000012928	sf3b2	86	71.373	Mola_mola
MGP_SPRETEiJ_G0023453	Sf3b2	72	88.031	ENSMODG00000025020	-	99	87.087	Monodelphis_domestica
MGP_SPRETEiJ_G0023453	Sf3b2	85	90.861	ENSMODG00000008490	-	92	92.573	Monodelphis_domestica
MGP_SPRETEiJ_G0023453	Sf3b2	86	70.496	ENSMALG00000015137	sf3b2	76	78.988	Monopterus_albus
MGP_SPRETEiJ_G0023453	Sf3b2	100	98.861	MGP_CAROLIEiJ_G0022539	Sf3b2	100	98.861	Mus_caroli
MGP_SPRETEiJ_G0023453	Sf3b2	100	99.886	ENSMUSG00000024853	Sf3b2	100	99.886	Mus_musculus
MGP_SPRETEiJ_G0023453	Sf3b2	100	99.203	MGP_PahariEiJ_G0014036	Sf3b2	100	99.203	Mus_pahari
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.657	ENSMPUG00000011349	SF3B2	100	95.657	Mustela_putorius_furo
MGP_SPRETEiJ_G0023453	Sf3b2	100	94.327	ENSMLUG00000011136	SF3B2	100	94.327	Myotis_lucifugus
MGP_SPRETEiJ_G0023453	Sf3b2	100	98.405	ENSNGAG00000012103	Sf3b2	100	98.405	Nannospalax_galili
MGP_SPRETEiJ_G0023453	Sf3b2	100	91.657	ENSNLEG00000006007	SF3B2	100	90.797	Nomascus_leucogenys
MGP_SPRETEiJ_G0023453	Sf3b2	76	93.466	ENSMEUG00000000019	SF3B2	80	93.466	Notamacropus_eugenii
MGP_SPRETEiJ_G0023453	Sf3b2	100	94.077	ENSODEG00000017764	SF3B2	100	94.077	Octodon_degus
MGP_SPRETEiJ_G0023453	Sf3b2	97	67.234	ENSONIG00000013068	sf3b2	87	75.626	Oreochromis_niloticus
MGP_SPRETEiJ_G0023453	Sf3b2	87	81.234	ENSOANG00000012482	SF3B2	97	80.927	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023453	Sf3b2	62	64.695	ENSOCUG00000024154	-	100	64.880	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023453	Sf3b2	100	90.726	ENSOCUG00000015722	-	100	90.615	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023453	Sf3b2	97	66.176	ENSORLG00000008235	sf3b2	85	73.289	Oryzias_latipes
MGP_SPRETEiJ_G0023453	Sf3b2	97	66.176	ENSORLG00020005357	sf3b2	88	73.289	Oryzias_latipes_hni
MGP_SPRETEiJ_G0023453	Sf3b2	97	66.290	ENSORLG00015022454	sf3b2	82	78.165	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0023453	Sf3b2	97	65.000	ENSOMEG00000017480	sf3b2	84	73.481	Oryzias_melastigma
MGP_SPRETEiJ_G0023453	Sf3b2	100	89.497	ENSOGAG00000005799	SF3B2	100	90.056	Otolemur_garnettii
MGP_SPRETEiJ_G0023453	Sf3b2	100	93.764	ENSOARG00000002125	SF3B2	100	95.257	Ovis_aries
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.754	ENSPPAG00000007359	SF3B2	100	95.754	Pan_paniscus
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.730	ENSPPRG00000013334	SF3B2	100	97.730	Panthera_pardus
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.616	ENSPTIG00000015022	SF3B2	100	97.616	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.754	ENSPTRG00000003912	SF3B2	100	95.754	Pan_troglodytes
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.722	ENSPANG00000008593	SF3B2	100	97.722	Papio_anubis
MGP_SPRETEiJ_G0023453	Sf3b2	97	66.404	ENSPKIG00000016576	sf3b2	86	80.222	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0023453	Sf3b2	93	82.388	ENSPSIG00000003158	SF3B2	100	88.006	Pelodiscus_sinensis
MGP_SPRETEiJ_G0023453	Sf3b2	84	67.104	ENSPMGG00000000819	sf3b2	84	66.934	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0023453	Sf3b2	100	99.317	ENSPEMG00000015437	Sf3b2	100	99.317	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023453	Sf3b2	93	84.663	ENSPEMG00000015451	-	100	84.663	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023453	Sf3b2	85	90.451	ENSPCIG00000008381	SF3B2	100	89.667	Phascolarctos_cinereus
MGP_SPRETEiJ_G0023453	Sf3b2	97	68.836	ENSPFOG00000002552	sf3b2	86	74.474	Poecilia_formosa
MGP_SPRETEiJ_G0023453	Sf3b2	97	68.950	ENSPLAG00000001471	sf3b2	86	74.605	Poecilia_latipinna
MGP_SPRETEiJ_G0023453	Sf3b2	97	67.580	ENSPMEG00000013180	sf3b2	86	74.440	Poecilia_mexicana
MGP_SPRETEiJ_G0023453	Sf3b2	84	72.127	ENSPREG00000002665	sf3b2	86	74.113	Poecilia_reticulata
MGP_SPRETEiJ_G0023453	Sf3b2	74	92.846	ENSPPYG00000003034	-	99	92.846	Pongo_abelii
MGP_SPRETEiJ_G0023453	Sf3b2	100	94.766	ENSPCAG00000005129	SF3B2	100	94.766	Procavia_capensis
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.494	ENSPCOG00000025375	SF3B2	100	97.494	Propithecus_coquereli
MGP_SPRETEiJ_G0023453	Sf3b2	56	99.299	ENSPVAG00000016975	-	55	99.299	Pteropus_vampyrus
MGP_SPRETEiJ_G0023453	Sf3b2	54	99.561	ENSPVAG00000005466	-	80	99.561	Pteropus_vampyrus
MGP_SPRETEiJ_G0023453	Sf3b2	81	72.992	ENSPNYG00000023594	sf3b2	92	73.901	Pundamilia_nyererei
MGP_SPRETEiJ_G0023453	Sf3b2	97	67.379	ENSPNAG00000001891	sf3b2	81	73.842	Pygocentrus_nattereri
MGP_SPRETEiJ_G0023453	Sf3b2	100	98.975	ENSRNOG00000020412	Sf3b2	100	98.975	Rattus_norvegicus
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.608	ENSRBIG00000034065	SF3B2	100	97.608	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023453	Sf3b2	100	97.608	ENSRROG00000034496	SF3B2	100	97.608	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023453	Sf3b2	100	92.913	ENSSBOG00000026337	SF3B2	100	93.466	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023453	Sf3b2	85	85.509	ENSSHAG00000010933	-	84	86.292	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023453	Sf3b2	96	69.222	ENSSHAG00000018043	-	100	70.000	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023453	Sf3b2	97	66.519	ENSSFOG00015021125	sf3b2	97	67.458	Scleropages_formosus
MGP_SPRETEiJ_G0023453	Sf3b2	60	87.666	ENSSMAG00000004079	sf3b2	88	72.774	Scophthalmus_maximus
MGP_SPRETEiJ_G0023453	Sf3b2	60	87.856	ENSSDUG00000008499	sf3b2	85	70.672	Seriola_dumerili
MGP_SPRETEiJ_G0023453	Sf3b2	60	88.425	ENSSLDG00000006838	sf3b2	86	74.902	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0023453	Sf3b2	52	99.206	ENSSARG00000003707	-	53	99.206	Sorex_araneus
MGP_SPRETEiJ_G0023453	Sf3b2	100	81.264	ENSSPUG00000009198	SF3B2	85	84.070	Sphenodon_punctatus
MGP_SPRETEiJ_G0023453	Sf3b2	97	66.851	ENSSPAG00000004406	sf3b2	86	73.198	Stegastes_partitus
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.100	ENSSSCG00000012957	SF3B2	100	95.100	Sus_scrofa
MGP_SPRETEiJ_G0023453	Sf3b2	97	54.504	ENSTRUG00000007611	sf3b2	88	71.763	Takifugu_rubripes
MGP_SPRETEiJ_G0023453	Sf3b2	86	70.026	ENSTNIG00000007441	sf3b2	88	68.809	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0023453	Sf3b2	91	95.349	ENSTBEG00000004258	SF3B2	82	99.286	Tupaia_belangeri
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.434	ENSTTRG00000014339	SF3B2	100	95.434	Tursiops_truncatus
MGP_SPRETEiJ_G0023453	Sf3b2	100	93.882	ENSUAMG00000020754	SF3B2	99	94.994	Ursus_americanus
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.880	ENSUMAG00000010994	SF3B2	100	95.880	Ursus_maritimus
MGP_SPRETEiJ_G0023453	Sf3b2	67	99.153	ENSVPAG00000008695	SF3B2	63	99.153	Vicugna_pacos
MGP_SPRETEiJ_G0023453	Sf3b2	100	95.657	ENSVVUG00000027029	SF3B2	100	95.657	Vulpes_vulpes
MGP_SPRETEiJ_G0023453	Sf3b2	87	71.778	ENSXETG00000008422	sf3b2	87	78.248	Xenopus_tropicalis
MGP_SPRETEiJ_G0023453	Sf3b2	72	78.413	ENSXCOG00000008943	sf3b2	84	78.254	Xiphophorus_couchianus
MGP_SPRETEiJ_G0023453	Sf3b2	60	87.736	ENSXMAG00000008467	sf3b2	86	72.346	Xiphophorus_maculatus