EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023609 (Gene tree)
Gene ID: -
Gene Symbol: Ddb1
Alias: DNA repair protein|damage-specific DNA-binding protein|DNA repair|p127-Ddb1
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 25555 bases
Position: chr19:6905796-6931350
Accession: 1202384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0050121	CPSF_A	PF03178.15	8.2e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0050121	-	4155	-	MGP_SPRETEiJ_P0050121	1140 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023609's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
MGP_SPRETEiJ_G0023609	Ddb1	98	91.554	ENSAPOG00000005036	ddb1	99	91.633	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.825	ENSAMEG00000016518	DDB1	100	99.825	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023609	Ddb1	86	91.939	ENSACIG00000020624	ddb1	99	91.939	Amphilophus_citrinellus
MGP_SPRETEiJ_G0023609	Ddb1	100	91.228	ENSAOCG00000003066	ddb1	100	91.228	Amphiprion_ocellaris
MGP_SPRETEiJ_G0023609	Ddb1	100	91.316	ENSAPEG00000000092	ddb1	100	91.316	Amphiprion_percula
MGP_SPRETEiJ_G0023609	Ddb1	94	91.814	ENSATEG00000020571	ddb1	97	91.814	Anabas_testudineus
MGP_SPRETEiJ_G0023609	Ddb1	98	96.533	ENSAPLG00000007174	DDB1	99	96.533	Anas_platyrhynchos
MGP_SPRETEiJ_G0023609	Ddb1	100	97.018	ENSACAG00000017758	DDB1	100	97.018	Anolis_carolinensis
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSANAG00000021878	DDB1	100	99.737	Aotus_nancymaae
MGP_SPRETEiJ_G0023609	Ddb1	100	91.579	ENSACLG00000012401	ddb1	100	91.579	Astatotilapia_calliptera
MGP_SPRETEiJ_G0023609	Ddb1	100	99.649	ENSBTAG00000021569	DDB1	93	99.649	Bos_taurus
MGP_SPRETEiJ_G0023609	Ddb1	100	37.211	WBGene00010890	ddb-1	100	37.126	Caenorhabditis_elegans
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSCJAG00000019319	DDB1	100	99.737	Callithrix_jacchus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.825	ENSCAFG00000016264	DDB1	100	99.825	Canis_familiaris
MGP_SPRETEiJ_G0023609	Ddb1	94	99.535	ENSCAFG00020012722	DDB1	99	99.535	Canis_lupus_dingo
MGP_SPRETEiJ_G0023609	Ddb1	100	99.649	ENSCHIG00000014969	DDB1	100	99.649	Capra_hircus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.123	ENSTSYG00000008027	DDB1	100	99.123	Carlito_syrichta
MGP_SPRETEiJ_G0023609	Ddb1	98	99.106	ENSCAPG00000010786	DDB1	100	99.106	Cavia_aperea
MGP_SPRETEiJ_G0023609	Ddb1	100	99.123	ENSCPOG00000009956	DDB1	100	99.123	Cavia_porcellus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSCCAG00000035883	DDB1	100	99.737	Cebus_capucinus
MGP_SPRETEiJ_G0023609	Ddb1	100	97.222	ENSCATG00000044495	DDB1	100	97.222	Cercocebus_atys
MGP_SPRETEiJ_G0023609	Ddb1	100	99.211	ENSCLAG00000004126	DDB1	100	99.211	Chinchilla_lanigera
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSCSAG00000006392	DDB1	100	99.737	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023609	Ddb1	88	92.614	ENSCHOG00000011377	DDB1	90	92.614	Choloepus_hoffmanni
MGP_SPRETEiJ_G0023609	Ddb1	100	97.719	ENSCPBG00000017728	DDB1	100	97.719	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023609	Ddb1	100	61.979	ENSCING00000007437	-	100	61.892	Ciona_intestinalis
MGP_SPRETEiJ_G0023609	Ddb1	94	60.184	ENSCSAVG00000004783	-	100	60.184	Ciona_savignyi
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSCANG00000019948	DDB1	100	99.737	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.825	ENSCGRG00001016599	Ddb1	100	99.825	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023609	Ddb1	100	99.825	ENSCGRG00000013427	Ddb1	100	99.825	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023609	Ddb1	93	91.329	ENSCSEG00000012499	ddb1	99	89.777	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0023609	Ddb1	94	91.519	ENSCVAG00000019531	ddb1	99	91.519	Cyprinodon_variegatus
MGP_SPRETEiJ_G0023609	Ddb1	100	88.354	ENSDARG00000074431	ddb1	100	88.472	Danio_rerio
MGP_SPRETEiJ_G0023609	Ddb1	94	99.163	ENSDNOG00000014884	DDB1	97	99.163	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023609	Ddb1	84	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
MGP_SPRETEiJ_G0023609	Ddb1	100	61.048	FBgn0260962	pic	100	60.839	Drosophila_melanogaster
MGP_SPRETEiJ_G0023609	Ddb1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
MGP_SPRETEiJ_G0023609	Ddb1	78	84.927	ENSEBUG00000014593	ddb1	97	84.927	Eptatretus_burgeri
MGP_SPRETEiJ_G0023609	Ddb1	100	99.649	ENSEASG00005008184	DDB1	100	99.649	Equus_asinus_asinus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.649	ENSECAG00000012136	DDB1	100	99.649	Equus_caballus
MGP_SPRETEiJ_G0023609	Ddb1	85	97.475	ENSEEUG00000003194	DDB1	85	97.475	Erinaceus_europaeus
MGP_SPRETEiJ_G0023609	Ddb1	100	91.316	ENSELUG00000023868	ddb1	100	91.316	Esox_lucius
MGP_SPRETEiJ_G0023609	Ddb1	100	99.825	ENSFCAG00000029716	DDB1	100	99.825	Felis_catus
MGP_SPRETEiJ_G0023609	Ddb1	100	96.938	ENSFALG00000011981	DDB1	100	96.938	Ficedula_albicollis
MGP_SPRETEiJ_G0023609	Ddb1	100	99.123	ENSFDAG00000005128	DDB1	100	99.123	Fukomys_damarensis
MGP_SPRETEiJ_G0023609	Ddb1	90	90.588	ENSFHEG00000022133	ddb1	98	90.802	Fundulus_heteroclitus
MGP_SPRETEiJ_G0023609	Ddb1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
MGP_SPRETEiJ_G0023609	Ddb1	100	97.105	ENSGALG00000042333	DDB1	100	97.105	Gallus_gallus
MGP_SPRETEiJ_G0023609	Ddb1	94	91.333	ENSGAFG00000013142	ddb1	99	91.333	Gambusia_affinis
MGP_SPRETEiJ_G0023609	Ddb1	96	90.742	ENSGACG00000017182	ddb1	100	90.742	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0023609	Ddb1	95	97.786	ENSGAGG00000014124	DDB1	100	97.786	Gopherus_agassizii
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSGGOG00000004052	DDB1	100	99.737	Gorilla_gorilla
MGP_SPRETEiJ_G0023609	Ddb1	100	91.579	ENSHBUG00000008873	ddb1	100	91.579	Haplochromis_burtoni
MGP_SPRETEiJ_G0023609	Ddb1	100	99.035	ENSHGLG00000018430	DDB1	100	99.035	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023609	Ddb1	100	97.982	ENSHGLG00100014475	DDB1	100	97.982	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023609	Ddb1	94	91.078	ENSHCOG00000018670	ddb1	98	91.078	Hippocampus_comes
MGP_SPRETEiJ_G0023609	Ddb1	100	90.614	ENSIPUG00000005612	DDB1	100	90.614	Ictalurus_punctatus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSSTOG00000007552	DDB1	100	99.737	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.561	ENSJJAG00000017769	Ddb1	100	99.561	Jaculus_jaculus
MGP_SPRETEiJ_G0023609	Ddb1	94	91.426	ENSKMAG00000002315	ddb1	99	91.426	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0023609	Ddb1	85	91.606	ENSLBEG00000017065	ddb1	99	91.606	Labrus_bergylta
MGP_SPRETEiJ_G0023609	Ddb1	100	93.608	ENSLACG00000017611	DDB1	100	93.608	Latimeria_chalumnae
MGP_SPRETEiJ_G0023609	Ddb1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.561	ENSLAFG00000011513	DDB1	100	99.561	Loxodonta_africana
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSMFAG00000042035	DDB1	100	99.737	Macaca_fascicularis
MGP_SPRETEiJ_G0023609	Ddb1	99	99.735	ENSMMUG00000002691	DDB1	99	99.735	Macaca_mulatta
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSMNEG00000031559	DDB1	100	99.737	Macaca_nemestrina
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSMLEG00000044136	DDB1	100	99.737	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023609	Ddb1	100	91.579	ENSMAMG00000014372	ddb1	100	91.579	Mastacembelus_armatus
MGP_SPRETEiJ_G0023609	Ddb1	100	91.491	ENSMZEG00005013835	ddb1	100	91.491	Maylandia_zebra
MGP_SPRETEiJ_G0023609	Ddb1	94	96.462	ENSMGAG00000004990	DDB1	100	96.462	Meleagris_gallopavo
MGP_SPRETEiJ_G0023609	Ddb1	100	99.825	ENSMAUG00000012926	Ddb1	100	99.825	Mesocricetus_auratus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSMICG00000013703	DDB1	100	99.737	Microcebus_murinus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.561	ENSMOCG00000020499	Ddb1	100	99.561	Microtus_ochrogaster
MGP_SPRETEiJ_G0023609	Ddb1	86	91.939	ENSMMOG00000001758	ddb1	99	91.939	Mola_mola
MGP_SPRETEiJ_G0023609	Ddb1	100	89.360	ENSMODG00000020353	DDB1	100	89.360	Monodelphis_domestica
MGP_SPRETEiJ_G0023609	Ddb1	100	91.579	ENSMALG00000014071	ddb1	100	91.579	Monopterus_albus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.912	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.912	Mus_caroli
MGP_SPRETEiJ_G0023609	Ddb1	100	99.912	ENSMUSG00000024740	Ddb1	100	99.912	Mus_musculus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.912	MGP_PahariEiJ_G0014189	Ddb1	100	99.912	Mus_pahari
MGP_SPRETEiJ_G0023609	Ddb1	100	96.491	ENSMPUG00000014200	DDB1	100	96.491	Mustela_putorius_furo
MGP_SPRETEiJ_G0023609	Ddb1	100	99.474	ENSMLUG00000013232	DDB1	100	99.474	Myotis_lucifugus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.386	ENSNGAG00000009384	Ddb1	100	99.386	Nannospalax_galili
MGP_SPRETEiJ_G0023609	Ddb1	100	91.667	ENSNBRG00000019581	ddb1	100	91.667	Neolamprologus_brichardi
MGP_SPRETEiJ_G0023609	Ddb1	100	96.615	ENSNLEG00000002022	DDB1	100	96.615	Nomascus_leucogenys
MGP_SPRETEiJ_G0023609	Ddb1	91	99.648	ENSMEUG00000001099	DDB1	93	99.648	Notamacropus_eugenii
MGP_SPRETEiJ_G0023609	Ddb1	90	91.077	ENSOPRG00000008254	DDB1	90	91.077	Ochotona_princeps
MGP_SPRETEiJ_G0023609	Ddb1	100	99.035	ENSODEG00000002419	DDB1	100	99.035	Octodon_degus
MGP_SPRETEiJ_G0023609	Ddb1	100	91.579	ENSONIG00000005804	ddb1	100	91.579	Oreochromis_niloticus
MGP_SPRETEiJ_G0023609	Ddb1	91	98.062	ENSOANG00000004897	DDB1	100	98.062	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSOCUG00000001667	DDB1	100	99.737	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023609	Ddb1	96	90.009	ENSORLG00000001399	ddb1	98	91.258	Oryzias_latipes
MGP_SPRETEiJ_G0023609	Ddb1	96	89.918	ENSORLG00020001277	ddb1	97	89.918	Oryzias_latipes_hni
MGP_SPRETEiJ_G0023609	Ddb1	94	91.070	ENSORLG00015002080	ddb1	99	91.070	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0023609	Ddb1	96	89.881	ENSOMEG00000006181	ddb1	99	89.881	Oryzias_melastigma
MGP_SPRETEiJ_G0023609	Ddb1	100	99.561	ENSOGAG00000016103	DDB1	100	99.561	Otolemur_garnettii
MGP_SPRETEiJ_G0023609	Ddb1	99	99.644	ENSOARG00000011716	DDB1	98	99.644	Ovis_aries
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSPPAG00000035343	DDB1	100	99.737	Pan_paniscus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.825	ENSPPRG00000013300	DDB1	100	99.825	Panthera_pardus
MGP_SPRETEiJ_G0023609	Ddb1	98	99.821	ENSPTIG00000006909	DDB1	98	99.821	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSPTRG00000003737	DDB1	100	99.737	Pan_troglodytes
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSPANG00000000242	DDB1	100	99.737	Papio_anubis
MGP_SPRETEiJ_G0023609	Ddb1	94	91.426	ENSPKIG00000019213	ddb1	94	91.426	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0023609	Ddb1	98	97.064	ENSPSIG00000013275	DDB1	100	97.064	Pelodiscus_sinensis
MGP_SPRETEiJ_G0023609	Ddb1	86	91.633	ENSPMGG00000021179	ddb1	99	91.633	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.825	ENSPEMG00000012241	Ddb1	100	99.825	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023609	Ddb1	89	86.837	ENSPMAG00000008479	ddb1	100	86.837	Petromyzon_marinus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.035	ENSPCIG00000002643	DDB1	100	99.035	Phascolarctos_cinereus
MGP_SPRETEiJ_G0023609	Ddb1	100	90.973	ENSPFOG00000002768	ddb1	100	90.973	Poecilia_formosa
MGP_SPRETEiJ_G0023609	Ddb1	100	90.789	ENSPLAG00000017227	ddb1	100	90.789	Poecilia_latipinna
MGP_SPRETEiJ_G0023609	Ddb1	100	90.789	ENSPMEG00000011398	ddb1	100	90.789	Poecilia_mexicana
MGP_SPRETEiJ_G0023609	Ddb1	94	91.442	ENSPREG00000004440	ddb1	98	91.442	Poecilia_reticulata
MGP_SPRETEiJ_G0023609	Ddb1	100	94.764	ENSPPYG00000003193	DDB1	100	94.764	Pongo_abelii
MGP_SPRETEiJ_G0023609	Ddb1	85	99.403	ENSPCAG00000011040	DDB1	85	99.403	Procavia_capensis
MGP_SPRETEiJ_G0023609	Ddb1	100	98.161	ENSPCOG00000015176	DDB1	100	98.161	Propithecus_coquereli
MGP_SPRETEiJ_G0023609	Ddb1	100	99.649	ENSPVAG00000003847	DDB1	100	99.649	Pteropus_vampyrus
MGP_SPRETEiJ_G0023609	Ddb1	94	91.426	ENSPNAG00000006635	ddb1	97	91.426	Pygocentrus_nattereri
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSRNOG00000020715	Ddb1	100	99.737	Rattus_norvegicus
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSRBIG00000033611	DDB1	100	99.737	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSRROG00000041407	DDB1	100	99.737	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023609	Ddb1	100	99.649	ENSSBOG00000019775	DDB1	100	99.649	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023609	Ddb1	94	97.103	ENSSHAG00000011600	DDB1	100	97.103	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023609	Ddb1	94	91.543	ENSSFOG00015011151	ddb1	97	91.543	Scleropages_formosus
MGP_SPRETEiJ_G0023609	Ddb1	100	91.140	ENSSMAG00000009495	ddb1	100	91.140	Scophthalmus_maximus
MGP_SPRETEiJ_G0023609	Ddb1	100	91.491	ENSSDUG00000004642	ddb1	100	91.491	Seriola_dumerili
MGP_SPRETEiJ_G0023609	Ddb1	100	91.491	ENSSLDG00000015804	ddb1	100	91.491	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0023609	Ddb1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
MGP_SPRETEiJ_G0023609	Ddb1	100	97.895	ENSSPUG00000019338	DDB1	100	97.895	Sphenodon_punctatus
MGP_SPRETEiJ_G0023609	Ddb1	94	91.721	ENSSPAG00000009888	ddb1	99	91.721	Stegastes_partitus
MGP_SPRETEiJ_G0023609	Ddb1	100	98.772	ENSSSCG00000013094	DDB1	100	98.772	Sus_scrofa
MGP_SPRETEiJ_G0023609	Ddb1	100	97.105	ENSTGUG00000006414	DDB1	100	97.105	Taeniopygia_guttata
MGP_SPRETEiJ_G0023609	Ddb1	94	90.401	ENSTRUG00000016682	ddb1	98	90.401	Takifugu_rubripes
MGP_SPRETEiJ_G0023609	Ddb1	88	85.130	ENSTNIG00000009565	ddb1	99	85.130	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0023609	Ddb1	92	94.648	ENSTTRG00000011055	DDB1	94	94.648	Tursiops_truncatus
MGP_SPRETEiJ_G0023609	Ddb1	94	99.535	ENSUAMG00000017793	DDB1	93	99.535	Ursus_americanus
MGP_SPRETEiJ_G0023609	Ddb1	94	99.535	ENSUMAG00000011788	DDB1	98	99.535	Ursus_maritimus
MGP_SPRETEiJ_G0023609	Ddb1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	ENSVVUG00000004987	DDB1	100	99.737	Vulpes_vulpes
MGP_SPRETEiJ_G0023609	Ddb1	100	93.269	ENSXETG00000008820	ddb1	100	93.269	Xenopus_tropicalis
MGP_SPRETEiJ_G0023609	Ddb1	86	91.429	ENSXCOG00000013956	ddb1	99	91.429	Xiphophorus_couchianus
MGP_SPRETEiJ_G0023609	Ddb1	94	91.333	ENSXMAG00000000022	ddb1	99	91.333	Xiphophorus_maculatus