EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0023759 (Gene tree)
Gene ID
-
Gene Symbol
Smarca2
Alias
2610209L14Rik|Snf2l2|brm
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
250830 bases
Position
chr19:23759522-24010351
Accession
99603
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0050426ResIIIPF04851.153.9e-0811
MGP_SPRETEiJ_P0050427ResIIIPF04851.154e-0811
MGP_SPRETEiJ_P0050429ResIIIPF04851.152.1e-0611
MGP_SPRETEiJ_P0050429BRKPF07533.164.4e-1711
MGP_SPRETEiJ_P0050426BRKPF07533.164.5e-1711
MGP_SPRETEiJ_P0050427BRKPF07533.164.5e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0050440-1849-MGP_SPRETEiJ_P0050440236 (aa)-UPI00000224A2
MGP_SPRETEiJ_T0050441-835-MGP_SPRETEiJ_P0050441235 (aa)-UPI00024675EF
MGP_SPRETEiJ_T0050442-493-MGP_SPRETEiJ_P005044283 (aa)-UPI00024675F0
MGP_SPRETEiJ_T0050443-1451-MGP_SPRETEiJ_P0050443113 (aa)--
MGP_SPRETEiJ_T0050444-960-MGP_SPRETEiJ_P0050444119 (aa)-UPI00000E78BF
MGP_SPRETEiJ_T0050437-942-MGP_SPRETEiJ_P0050437254 (aa)-UPI00024675ED
MGP_SPRETEiJ_T0050445-736-MGP_SPRETEiJ_P0050445119 (aa)-UPI00000E78BF
MGP_SPRETEiJ_T0050435-426--- (aa)--
MGP_SPRETEiJ_T0050439-879-MGP_SPRETEiJ_P0050439276 (aa)-UPI00001ECDC7
MGP_SPRETEiJ_T0050438-788-MGP_SPRETEiJ_P0050438224 (aa)-UPI00024675EE
MGP_SPRETEiJ_T0050428-5907-MGP_SPRETEiJ_P00504281511 (aa)--
MGP_SPRETEiJ_T0050429-4581-MGP_SPRETEiJ_P00504291526 (aa)--
MGP_SPRETEiJ_T0050426-5852-MGP_SPRETEiJ_P00504261584 (aa)--
MGP_SPRETEiJ_T0050427-5856-MGP_SPRETEiJ_P00504271602 (aa)--
MGP_SPRETEiJ_T0050434-867--- (aa)--
MGP_SPRETEiJ_T0050436-929-MGP_SPRETEiJ_P0050436254 (aa)-UPI00024675ED
MGP_SPRETEiJ_T0050431-649-MGP_SPRETEiJ_P0050431174 (aa)--
MGP_SPRETEiJ_T0050430-3314-MGP_SPRETEiJ_P00504301033 (aa)--
MGP_SPRETEiJ_T0050433-1584--- (aa)--
MGP_SPRETEiJ_T0050432-649--- (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0023759's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023759's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0023759Smarca29790.909MGP_SPRETEiJ_G0033003Smarca49279.812
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0023759Smarca29998.152ENSG00000080503SMARCA210098.658Homo_sapiens
MGP_SPRETEiJ_G0023759Smarca29790.909ENSAPOG00000002641SMARCA29778.495Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0023759Smarca289100.000ENSAMEG00000012325SMARCA210098.513Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023759Smarca29790.909ENSACIG00000015607SMARCA29778.954Amphilophus_citrinellus
MGP_SPRETEiJ_G0023759Smarca29790.909ENSAOCG00000009647-9679.805Amphiprion_ocellaris
MGP_SPRETEiJ_G0023759Smarca29790.909ENSAPEG00000007646SMARCA29679.281Amphiprion_percula
MGP_SPRETEiJ_G0023759Smarca29787.029ENSATEG00000006916SMARCA28384.369Anabas_testudineus
MGP_SPRETEiJ_G0023759Smarca290100.000ENSAPLG00000013873SMARCA29887.736Anas_platyrhynchos
MGP_SPRETEiJ_G0023759Smarca29796.970ENSACAG00000002423SMARCA28492.672Anolis_carolinensis
MGP_SPRETEiJ_G0023759Smarca298100.000ENSANAG00000026498SMARCA210096.212Aotus_nancymaae
MGP_SPRETEiJ_G0023759Smarca29790.909ENSACLG00000004248SMARCA29780.450Astatotilapia_calliptera
MGP_SPRETEiJ_G0023759Smarca29787.395ENSAMXG00000012404smarca29679.910Astyanax_mexicanus
MGP_SPRETEiJ_G0023759Smarca29998.361ENSBTAG00000007494SMARCA210095.013Bos_taurus
MGP_SPRETEiJ_G0023759Smarca29996.565ENSCJAG00000010710SMARCA29996.532Callithrix_jacchus
MGP_SPRETEiJ_G0023759Smarca210095.518ENSCAFG00000002013SMARCA210095.518Canis_familiaris
MGP_SPRETEiJ_G0023759Smarca286100.000ENSCAFG00020026802SMARCA29894.330Canis_lupus_dingo
MGP_SPRETEiJ_G0023759Smarca29998.361ENSCHIG00000025863SMARCA210095.013Capra_hircus
MGP_SPRETEiJ_G0023759Smarca210096.513ENSTSYG00000003858SMARCA210096.513Carlito_syrichta
MGP_SPRETEiJ_G0023759Smarca293100.000ENSCAPG00000002890SMARCA29992.415Cavia_aperea
MGP_SPRETEiJ_G0023759Smarca210095.707ENSCPOG00000005475SMARCA210095.707Cavia_porcellus
MGP_SPRETEiJ_G0023759Smarca29998.357ENSCCAG00000030636SMARCA210096.338Cebus_capucinus
MGP_SPRETEiJ_G0023759Smarca29998.152ENSCATG00000031470SMARCA210095.839Cercocebus_atys
MGP_SPRETEiJ_G0023759Smarca299100.000ENSCLAG00000014484SMARCA210096.275Chinchilla_lanigera
MGP_SPRETEiJ_G0023759Smarca29496.221ENSCSAG00000008650SMARCA29996.221Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023759Smarca28790.162ENSCHOG00000004316SMARCA28790.162Choloepus_hoffmanni
MGP_SPRETEiJ_G0023759Smarca297100.000ENSCPBG00000025463SMARCA210094.809Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023759Smarca29998.357ENSCANG00000039597SMARCA210096.275Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023759Smarca29899.180ENSCGRG00001002323Smarca210090.019Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023759Smarca29778.870ENSCSEG00000019311SMARCA29676.863Cynoglossus_semilaevis
MGP_SPRETEiJ_G0023759Smarca27694.902ENSCVAG00000016571SMARCA27794.902Cyprinodon_variegatus
MGP_SPRETEiJ_G0023759Smarca29790.909ENSDARG00000008904smarca28387.500Danio_rerio
MGP_SPRETEiJ_G0023759Smarca29998.156ENSDNOG00000006402SMARCA210093.883Dasypus_novemcinctus
MGP_SPRETEiJ_G0023759Smarca299100.000ENSDORG00000014832Smarca210096.275Dipodomys_ordii
MGP_SPRETEiJ_G0023759Smarca29181.818FBgn0000212brm6380.556Drosophila_melanogaster
MGP_SPRETEiJ_G0023759Smarca29371.499ENSEBUG00000011442-8174.900Eptatretus_burgeri
MGP_SPRETEiJ_G0023759Smarca29064.680ENSEBUG00000002449-9064.943Eptatretus_burgeri
MGP_SPRETEiJ_G0023759Smarca29898.361ENSEASG00005010312SMARCA210095.076Equus_asinus_asinus
MGP_SPRETEiJ_G0023759Smarca269100.000ENSEEUG00000015540-6997.222Erinaceus_europaeus
MGP_SPRETEiJ_G0023759Smarca28989.737ENSELUG00000010318smarca29378.983Esox_lucius
MGP_SPRETEiJ_G0023759Smarca29898.361ENSFCAG00000001568SMARCA210094.697Felis_catus
MGP_SPRETEiJ_G0023759Smarca295100.000ENSFALG00000010416SMARCA28996.071Ficedula_albicollis
MGP_SPRETEiJ_G0023759Smarca299100.000ENSFDAG00000010502SMARCA210094.521Fukomys_damarensis
MGP_SPRETEiJ_G0023759Smarca29790.909ENSFHEG00000021250SMARCA29679.987Fundulus_heteroclitus
MGP_SPRETEiJ_G0023759Smarca29877.165ENSGMOG00000014229SMARCA29777.102Gadus_morhua
MGP_SPRETEiJ_G0023759Smarca297100.000ENSGALG00000010164SMARCA28494.885Gallus_gallus
MGP_SPRETEiJ_G0023759Smarca29187.879ENSGAFG00000001164SMARCA27780.000Gambusia_affinis
MGP_SPRETEiJ_G0023759Smarca29785.774ENSGACG00000014488SMARCA28284.490Gasterosteus_aculeatus
MGP_SPRETEiJ_G0023759Smarca210090.233ENSGAGG00000024412SMARCA28394.809Gopherus_agassizii
MGP_SPRETEiJ_G0023759Smarca29598.855ENSGGOG00000000513SMARCA210096.601Gorilla_gorilla
MGP_SPRETEiJ_G0023759Smarca29790.909ENSHBUG00000006691SMARCA29580.612Haplochromis_burtoni
MGP_SPRETEiJ_G0023759Smarca299100.000ENSHGLG00000005215SMARCA29996.313Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023759Smarca299100.000ENSHGLG00100010496SMARCA210094.886Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023759Smarca28186.436ENSHCOG00000015348-7486.436Hippocampus_comes
MGP_SPRETEiJ_G0023759Smarca29786.765ENSIPUG00000011060smarca29679.809Ictalurus_punctatus
MGP_SPRETEiJ_G0023759Smarca29997.769ENSSTOG00000006812SMARCA210096.654Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023759Smarca29998.566ENSJJAG00000010867Smarca210096.591Jaculus_jaculus
MGP_SPRETEiJ_G0023759Smarca29790.909ENSKMAG00000015844-9680.362Kryptolebias_marmoratus
MGP_SPRETEiJ_G0023759Smarca25171.696ENSLACG00000000270SMARCA28981.481Latimeria_chalumnae
MGP_SPRETEiJ_G0023759Smarca29793.939ENSLOCG00000011499smarca28485.799Lepisosteus_oculatus
MGP_SPRETEiJ_G0023759Smarca29997.951ENSLAFG00000014061SMARCA28397.951Loxodonta_africana
MGP_SPRETEiJ_G0023759Smarca29998.152ENSMFAG00000003814SMARCA210094.949Macaca_fascicularis
MGP_SPRETEiJ_G0023759Smarca299100.000ENSMMUG00000015279SMARCA210096.275Macaca_mulatta
MGP_SPRETEiJ_G0023759Smarca29998.152ENSMNEG00000041069SMARCA210095.271Macaca_nemestrina
MGP_SPRETEiJ_G0023759Smarca299100.000ENSMLEG00000027418SMARCA210093.883Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023759Smarca29790.909ENSMAMG00000003056SMARCA29781.187Mastacembelus_armatus
MGP_SPRETEiJ_G0023759Smarca29790.909ENSMZEG00005020709SMARCA29580.769Maylandia_zebra
MGP_SPRETEiJ_G0023759Smarca26998.895ENSMGAG00000005160-10077.556Meleagris_gallopavo
MGP_SPRETEiJ_G0023759Smarca29997.951ENSMICG00000005162SMARCA210095.202Microcebus_murinus
MGP_SPRETEiJ_G0023759Smarca29999.180ENSMOCG00000001611Smarca210097.941Microtus_ochrogaster
MGP_SPRETEiJ_G0023759Smarca29790.909ENSMMOG00000014196SMARCA29678.869Mola_mola
MGP_SPRETEiJ_G0023759Smarca296100.000ENSMODG00000003578SMARCA210090.780Monodelphis_domestica
MGP_SPRETEiJ_G0023759Smarca29790.909ENSMALG00000009611SMARCA29680.418Monopterus_albus
MGP_SPRETEiJ_G0023759Smarca210099.747MGP_CAROLIEiJ_G0022841Smarca210099.747Mus_caroli
MGP_SPRETEiJ_G0023759Smarca210099.750ENSMUSG00000024921Smarca210099.750Mus_musculus
MGP_SPRETEiJ_G0023759Smarca210099.179MGP_PahariEiJ_G0014334Smarca210099.179Mus_pahari
MGP_SPRETEiJ_G0023759Smarca28198.214ENSMPUG00000005171SMARCA29498.517Mustela_putorius_furo
MGP_SPRETEiJ_G0023759Smarca29798.364ENSMLUG00000002342SMARCA28292.950Myotis_lucifugus
MGP_SPRETEiJ_G0023759Smarca29995.753ENSNGAG00000000108Smarca29995.753Nannospalax_galili
MGP_SPRETEiJ_G0023759Smarca29766.667ENSNBRG00000017998SMARCA29483.085Neolamprologus_brichardi
MGP_SPRETEiJ_G0023759Smarca210093.813ENSNLEG00000008575SMARCA210093.813Nomascus_leucogenys
MGP_SPRETEiJ_G0023759Smarca292100.000ENSMEUG00000009812SMARCA210084.082Notamacropus_eugenii
MGP_SPRETEiJ_G0023759Smarca29897.709ENSOPRG00000013474SMARCA29497.709Ochotona_princeps
MGP_SPRETEiJ_G0023759Smarca299100.000ENSODEG00000005452SMARCA29895.644Octodon_degus
MGP_SPRETEiJ_G0023759Smarca29790.909ENSONIG00000014163SMARCA28086.526Oreochromis_niloticus
MGP_SPRETEiJ_G0023759Smarca25194.223ENSOANG00000008299-9597.978Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023759Smarca29997.951ENSOCUG00000006320SMARCA210095.715Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023759Smarca29690.909ENSORLG00000020820SMARCA29777.874Oryzias_latipes
MGP_SPRETEiJ_G0023759Smarca29690.909ENSORLG00015006289SMARCA29590.872Oryzias_latipes_hsok
MGP_SPRETEiJ_G0023759Smarca29790.909ENSOMEG00000009736-8190.977Oryzias_melastigma
MGP_SPRETEiJ_G0023759Smarca29398.227ENSOGAG00000017053SMARCA29992.727Otolemur_garnettii
MGP_SPRETEiJ_G0023759Smarca29997.746ENSOARG00000013265SMARCA210093.628Ovis_aries
MGP_SPRETEiJ_G0023759Smarca293100.000ENSPPAG00000038717SMARCA29997.259Pan_paniscus
MGP_SPRETEiJ_G0023759Smarca210094.823ENSPPRG00000001879SMARCA210094.760Panthera_pardus
MGP_SPRETEiJ_G0023759Smarca210094.886ENSPTRG00000051168SMARCA29896.102Pan_troglodytes
MGP_SPRETEiJ_G0023759Smarca29998.152ENSPANG00000025121SMARCA210089.408Papio_anubis
MGP_SPRETEiJ_G0023759Smarca29890.909ENSPKIG00000018469-9781.230Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0023759Smarca210089.912ENSPSIG00000006284SMARCA28394.279Pelodiscus_sinensis
MGP_SPRETEiJ_G0023759Smarca29578.586ENSPMGG00000013696-9674.611Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0023759Smarca299100.000ENSPEMG00000019821Smarca210097.815Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023759Smarca28593.939ENSPMAG00000005337-8076.804Petromyzon_marinus
MGP_SPRETEiJ_G0023759Smarca296100.000ENSPCIG00000015658SMARCA210092.172Phascolarctos_cinereus
MGP_SPRETEiJ_G0023759Smarca29787.879ENSPFOG00000001856SMARCA29679.625Poecilia_formosa
MGP_SPRETEiJ_G0023759Smarca29787.879ENSPLAG00000017829SMARCA28182.585Poecilia_latipinna
MGP_SPRETEiJ_G0023759Smarca29787.879ENSPMEG00000001815-8184.356Poecilia_mexicana
MGP_SPRETEiJ_G0023759Smarca29787.879ENSPREG00000013800SMARCA29578.044Poecilia_reticulata
MGP_SPRETEiJ_G0023759Smarca210095.518ENSPPYG00000019258SMARCA210095.265Pongo_abelii
MGP_SPRETEiJ_G0023759Smarca28290.426ENSPCAG00000016969SMARCA27883.522Procavia_capensis
MGP_SPRETEiJ_G0023759Smarca29997.746ENSPCOG00000025709SMARCA210093.508Propithecus_coquereli
MGP_SPRETEiJ_G0023759Smarca28999.606ENSPVAG00000000901SMARCA29595.789Pteropus_vampyrus
MGP_SPRETEiJ_G0023759Smarca210076.075ENSPNYG00000004533SMARCA29575.427Pundamilia_nyererei
MGP_SPRETEiJ_G0023759Smarca29790.909ENSPNAG00000014635smarca28389.733Pygocentrus_nattereri
MGP_SPRETEiJ_G0023759Smarca210098.253ENSRNOG00000011931Smarca210098.253Rattus_norvegicus
MGP_SPRETEiJ_G0023759Smarca29998.357ENSRBIG00000038618SMARCA210094.508Rhinopithecus_bieti
MGP_SPRETEiJ_G0023759Smarca299100.000ENSRROG00000019271SMARCA29996.034Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023759Smarca299100.000ENSSBOG00000034827SMARCA29792.958Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023759Smarca296100.000ENSSHAG00000007884SMARCA210090.161Sarcophilus_harrisii
MGP_SPRETEiJ_G0023759Smarca29782.253ENSSFOG00015014870SMARCA29782.365Scleropages_formosus
MGP_SPRETEiJ_G0023759Smarca29990.909ENSSMAG00000013707SMARCA29680.194Scophthalmus_maximus
MGP_SPRETEiJ_G0023759Smarca29590.909ENSSDUG00000008852-9580.557Seriola_dumerili
MGP_SPRETEiJ_G0023759Smarca29788.075ENSSLDG00000025449SMARCA29680.480Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0023759Smarca29695.402ENSSARG00000007888SMARCA29495.263Sorex_araneus
MGP_SPRETEiJ_G0023759Smarca297100.000ENSSPUG00000001629SMARCA28690.502Sphenodon_punctatus
MGP_SPRETEiJ_G0023759Smarca29790.909ENSSPAG00000020091-9579.635Stegastes_partitus
MGP_SPRETEiJ_G0023759Smarca210095.013ENSSSCG00000005232SMARCA210094.949Sus_scrofa
MGP_SPRETEiJ_G0023759Smarca295100.000ENSTGUG00000005460SMARCA28395.455Taeniopygia_guttata
MGP_SPRETEiJ_G0023759Smarca29788.309ENSTRUG00000015619SMARCA29678.255Takifugu_rubripes
MGP_SPRETEiJ_G0023759Smarca26899.156ENSTBEG00000008767SMARCA27499.156Tupaia_belangeri
MGP_SPRETEiJ_G0023759Smarca29594.079ENSTTRG00000002033SMARCA29587.632Tursiops_truncatus
MGP_SPRETEiJ_G0023759Smarca29789.733ENSUAMG00000024701SMARCA29993.343Ursus_americanus
MGP_SPRETEiJ_G0023759Smarca29286.308ENSVPAG00000001204SMARCA210086.308Vicugna_pacos
MGP_SPRETEiJ_G0023759Smarca284100.000ENSVVUG00000004598SMARCA29995.329Vulpes_vulpes
MGP_SPRETEiJ_G0023759Smarca29990.593ENSXETG00000015299smarca27990.593Xenopus_tropicalis
MGP_SPRETEiJ_G0023759Smarca28391.239ENSXCOG00000011073SMARCA29779.092Xiphophorus_couchianus
MGP_SPRETEiJ_G0023759Smarca29787.879ENSXMAG00000015611SMARCA29679.858Xiphophorus_maculatus

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