EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023763 (Gene tree)
Gene ID: -
Gene Symbol: Pum3
Alias: 1110069H02Rik|D19Bwg1357e
Full Name: pumilio RNA-binding family member 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 36659 bases
Position: chr19:24567417-24604075
Accession: 106253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0050456	CPL	PF08144.11	2.2e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0050457	-	1182	-	MGP_SPRETEiJ_P0050457	366 (aa)	-	-
MGP_SPRETEiJ_T0050456	-	3461	-	MGP_SPRETEiJ_P0050456	648 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023763's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023763	Pum3	99	89.352	ENSG00000080608	PUM3	100	89.352	Homo_sapiens
MGP_SPRETEiJ_G0023763	Pum3	89	56.114	ENSAPOG00000020252	pum3	99	52.799	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0023763	Pum3	99	89.181	ENSAMEG00000012187	PUM3	100	89.181	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023763	Pum3	86	54.011	ENSACIG00000009786	pum3	88	55.198	Amphilophus_citrinellus
MGP_SPRETEiJ_G0023763	Pum3	99	54.173	ENSAOCG00000004439	pum3	99	53.788	Amphiprion_ocellaris
MGP_SPRETEiJ_G0023763	Pum3	99	54.173	ENSAPEG00000020523	pum3	99	53.788	Amphiprion_percula
MGP_SPRETEiJ_G0023763	Pum3	82	61.308	ENSATEG00000005799	pum3	82	61.290	Anabas_testudineus
MGP_SPRETEiJ_G0023763	Pum3	96	72.669	ENSAPLG00000002920	PUM3	100	72.669	Anas_platyrhynchos
MGP_SPRETEiJ_G0023763	Pum3	93	67.273	ENSACAG00000003174	PUM3	99	68.099	Anolis_carolinensis
MGP_SPRETEiJ_G0023763	Pum3	99	89.799	ENSANAG00000024520	PUM3	100	89.799	Aotus_nancymaae
MGP_SPRETEiJ_G0023763	Pum3	96	55.385	ENSACLG00000001017	pum3	95	54.688	Astatotilapia_calliptera
MGP_SPRETEiJ_G0023763	Pum3	91	63.894	ENSAMXG00000020911	pum3	95	63.894	Astyanax_mexicanus
MGP_SPRETEiJ_G0023763	Pum3	99	88.563	ENSBTAG00000013357	PUM3	100	88.563	Bos_taurus
MGP_SPRETEiJ_G0023763	Pum3	75	32.193	WBGene00014165	puf-12	64	32.193	Caenorhabditis_elegans
MGP_SPRETEiJ_G0023763	Pum3	99	89.026	ENSCJAG00000010917	PUM3	100	89.026	Callithrix_jacchus
MGP_SPRETEiJ_G0023763	Pum3	100	88.426	ENSCAFG00000002035	PUM3	100	88.426	Canis_familiaris
MGP_SPRETEiJ_G0023763	Pum3	100	88.272	ENSCAFG00020026867	PUM3	100	88.272	Canis_lupus_dingo
MGP_SPRETEiJ_G0023763	Pum3	99	88.408	ENSCHIG00000021559	PUM3	100	88.408	Capra_hircus
MGP_SPRETEiJ_G0023763	Pum3	99	88.099	ENSTSYG00000007481	PUM3	100	88.099	Carlito_syrichta
MGP_SPRETEiJ_G0023763	Pum3	100	84.746	ENSCAPG00000010592	-	100	84.746	Cavia_aperea
MGP_SPRETEiJ_G0023763	Pum3	100	86.420	ENSCPOG00000008552	-	100	86.420	Cavia_porcellus
MGP_SPRETEiJ_G0023763	Pum3	99	89.335	ENSCCAG00000032650	PUM3	100	89.335	Cebus_capucinus
MGP_SPRETEiJ_G0023763	Pum3	99	89.938	ENSCATG00000024880	PUM3	100	89.799	Cercocebus_atys
MGP_SPRETEiJ_G0023763	Pum3	100	89.043	ENSCLAG00000011892	PUM3	100	89.043	Chinchilla_lanigera
MGP_SPRETEiJ_G0023763	Pum3	99	89.954	ENSCSAG00000008691	PUM3	100	89.954	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023763	Pum3	100	67.747	ENSCHOG00000002535	PUM3	95	67.747	Choloepus_hoffmanni
MGP_SPRETEiJ_G0023763	Pum3	99	71.803	ENSCPBG00000025470	PUM3	95	71.032	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023763	Pum3	83	40.360	ENSCING00000024199	-	87	41.548	Ciona_intestinalis
MGP_SPRETEiJ_G0023763	Pum3	80	41.445	ENSCSAVG00000006072	-	99	40.762	Ciona_savignyi
MGP_SPRETEiJ_G0023763	Pum3	99	90.108	ENSCANG00000006142	PUM3	100	90.108	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023763	Pum3	100	93.056	ENSCGRG00001016402	Pum3	100	93.056	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023763	Pum3	100	93.056	ENSCGRG00000010207	Pum3	100	93.056	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023763	Pum3	89	56.849	ENSCSEG00000001565	pum3	99	56.604	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0023763	Pum3	62	50.000	ENSCVAG00000006550	pum3	95	50.000	Cyprinodon_variegatus
MGP_SPRETEiJ_G0023763	Pum3	94	65.287	ENSDARG00000087779	pum3	99	64.490	Danio_rerio
MGP_SPRETEiJ_G0023763	Pum3	100	75.730	ENSDNOG00000008157	PUM3	70	76.117	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023763	Pum3	81	82.732	ENSETEG00000015331	PUM3	81	82.732	Echinops_telfairi
MGP_SPRETEiJ_G0023763	Pum3	80	41.463	ENSEBUG00000011586	pum3	76	42.218	Eptatretus_burgeri
MGP_SPRETEiJ_G0023763	Pum3	99	90.402	ENSEASG00005010350	PUM3	100	90.263	Equus_asinus_asinus
MGP_SPRETEiJ_G0023763	Pum3	99	90.402	ENSECAG00000017193	PUM3	100	90.263	Equus_caballus
MGP_SPRETEiJ_G0023763	Pum3	93	79.768	ENSEEUG00000010314	PUM3	100	79.768	Erinaceus_europaeus
MGP_SPRETEiJ_G0023763	Pum3	96	61.417	ENSELUG00000002215	pum3	98	61.514	Esox_lucius
MGP_SPRETEiJ_G0023763	Pum3	99	71.626	ENSFALG00000010509	PUM3	100	71.626	Ficedula_albicollis
MGP_SPRETEiJ_G0023763	Pum3	100	88.426	ENSFDAG00000021027	PUM3	100	88.426	Fukomys_damarensis
MGP_SPRETEiJ_G0023763	Pum3	89	58.115	ENSFHEG00000015576	pum3	99	58.115	Fundulus_heteroclitus
MGP_SPRETEiJ_G0023763	Pum3	83	59.888	ENSGMOG00000014217	pum3	97	59.847	Gadus_morhua
MGP_SPRETEiJ_G0023763	Pum3	99	70.046	ENSGALG00000010178	PUM3	100	70.046	Gallus_gallus
MGP_SPRETEiJ_G0023763	Pum3	55	59.116	ENSGAFG00000001930	pum3	62	59.116	Gambusia_affinis
MGP_SPRETEiJ_G0023763	Pum3	82	58.271	ENSGACG00000017878	pum3	96	58.254	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0023763	Pum3	99	71.716	ENSGAGG00000018983	PUM3	99	72.249	Gopherus_agassizii
MGP_SPRETEiJ_G0023763	Pum3	99	89.645	ENSGGOG00000006143	PUM3	100	89.645	Gorilla_gorilla
MGP_SPRETEiJ_G0023763	Pum3	99	48.462	ENSHBUG00000012903	pum3	96	49.016	Haplochromis_burtoni
MGP_SPRETEiJ_G0023763	Pum3	100	88.580	ENSHGLG00000015868	-	100	88.580	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023763	Pum3	100	88.580	ENSHGLG00100018825	PUM3	100	88.717	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023763	Pum3	92	57.912	ENSHCOG00000010306	pum3	96	55.420	Hippocampus_comes
MGP_SPRETEiJ_G0023763	Pum3	87	66.372	ENSIPUG00000024801	pum3	99	62.381	Ictalurus_punctatus
MGP_SPRETEiJ_G0023763	Pum3	100	90.741	ENSSTOG00000009586	PUM3	100	90.741	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023763	Pum3	99	87.944	ENSJJAG00000012563	Pum3	99	87.944	Jaculus_jaculus
MGP_SPRETEiJ_G0023763	Pum3	95	54.662	ENSKMAG00000010277	pum3	98	54.690	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0023763	Pum3	99	53.353	ENSLBEG00000012213	pum3	99	53.214	Labrus_bergylta
MGP_SPRETEiJ_G0023763	Pum3	99	66.309	ENSLACG00000008312	PUM3	100	66.309	Latimeria_chalumnae
MGP_SPRETEiJ_G0023763	Pum3	96	65.605	ENSLOCG00000012529	pum3	99	65.605	Lepisosteus_oculatus
MGP_SPRETEiJ_G0023763	Pum3	100	86.883	ENSLAFG00000017341	PUM3	100	86.883	Loxodonta_africana
MGP_SPRETEiJ_G0023763	Pum3	99	89.954	ENSMFAG00000001430	PUM3	100	89.954	Macaca_fascicularis
MGP_SPRETEiJ_G0023763	Pum3	99	90.093	ENSMMUG00000002362	PUM3	99	89.954	Macaca_mulatta
MGP_SPRETEiJ_G0023763	Pum3	99	89.954	ENSMNEG00000035288	PUM3	100	89.954	Macaca_nemestrina
MGP_SPRETEiJ_G0023763	Pum3	99	90.263	ENSMLEG00000034820	PUM3	100	90.263	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023763	Pum3	85	58.230	ENSMAMG00000022861	pum3	81	60.456	Mastacembelus_armatus
MGP_SPRETEiJ_G0023763	Pum3	96	55.556	ENSMZEG00005014205	pum3	93	54.531	Maylandia_zebra
MGP_SPRETEiJ_G0023763	Pum3	99	63.456	ENSMGAG00000002255	PUM3	100	63.456	Meleagris_gallopavo
MGP_SPRETEiJ_G0023763	Pum3	100	93.364	ENSMAUG00000009733	Pum3	100	93.364	Mesocricetus_auratus
MGP_SPRETEiJ_G0023763	Pum3	99	88.854	ENSMICG00000045916	PUM3	87	88.854	Microcebus_murinus
MGP_SPRETEiJ_G0023763	Pum3	99	89.490	ENSMOCG00000014830	-	100	89.026	Microtus_ochrogaster
MGP_SPRETEiJ_G0023763	Pum3	100	93.827	ENSMOCG00000019519	-	100	93.827	Microtus_ochrogaster
MGP_SPRETEiJ_G0023763	Pum3	92	52.435	ENSMMOG00000012184	pum3	99	50.546	Mola_mola
MGP_SPRETEiJ_G0023763	Pum3	99	68.516	ENSMODG00000015417	PUM3	99	73.281	Monodelphis_domestica
MGP_SPRETEiJ_G0023763	Pum3	97	52.924	ENSMALG00000022164	pum3	93	54.732	Monopterus_albus
MGP_SPRETEiJ_G0023763	Pum3	100	98.457	MGP_CAROLIEiJ_G0022845	Pum3	100	98.457	Mus_caroli
MGP_SPRETEiJ_G0023763	Pum3	100	99.228	ENSMUSG00000041360	Pum3	100	99.228	Mus_musculus
MGP_SPRETEiJ_G0023763	Pum3	99	97.836	MGP_PahariEiJ_G0014338	Pum3	99	97.836	Mus_pahari
MGP_SPRETEiJ_G0023763	Pum3	99	86.862	ENSMPUG00000005125	PUM3	100	86.862	Mustela_putorius_furo
MGP_SPRETEiJ_G0023763	Pum3	99	87.152	ENSMLUG00000002309	PUM3	99	87.152	Myotis_lucifugus
MGP_SPRETEiJ_G0023763	Pum3	99	87.057	ENSNGAG00000019468	Pum3	100	87.057	Nannospalax_galili
MGP_SPRETEiJ_G0023763	Pum3	91	53.950	ENSNBRG00000021370	pum3	79	58.135	Neolamprologus_brichardi
MGP_SPRETEiJ_G0023763	Pum3	99	89.490	ENSNLEG00000008712	PUM3	100	89.490	Nomascus_leucogenys
MGP_SPRETEiJ_G0023763	Pum3	75	59.548	ENSMEUG00000013606	-	96	58.058	Notamacropus_eugenii
MGP_SPRETEiJ_G0023763	Pum3	79	76.333	ENSOPRG00000004225	-	79	76.333	Ochotona_princeps
MGP_SPRETEiJ_G0023763	Pum3	99	82.462	ENSODEG00000016477	-	100	82.462	Octodon_degus
MGP_SPRETEiJ_G0023763	Pum3	100	87.654	ENSODEG00000003625	-	100	87.654	Octodon_degus
MGP_SPRETEiJ_G0023763	Pum3	99	54.062	ENSONIG00000012733	pum3	95	54.062	Oreochromis_niloticus
MGP_SPRETEiJ_G0023763	Pum3	81	78.828	ENSOANG00000014995	PUM3	97	78.828	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023763	Pum3	99	88.872	ENSOCUG00000004189	-	100	88.872	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023763	Pum3	99	87.888	ENSOCUG00000026104	-	100	87.888	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023763	Pum3	94	53.519	ENSORLG00000014935	pum3	99	52.329	Oryzias_latipes
MGP_SPRETEiJ_G0023763	Pum3	91	54.377	ENSORLG00020002841	pum3	99	52.329	Oryzias_latipes_hni
MGP_SPRETEiJ_G0023763	Pum3	96	52.941	ENSORLG00015015906	pum3	99	52.167	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0023763	Pum3	91	54.730	ENSOMEG00000009427	pum3	97	51.473	Oryzias_melastigma
MGP_SPRETEiJ_G0023763	Pum3	99	65.596	ENSOGAG00000033481	-	99	64.220	Otolemur_garnettii
MGP_SPRETEiJ_G0023763	Pum3	99	87.500	ENSOGAG00000008125	-	100	87.500	Otolemur_garnettii
MGP_SPRETEiJ_G0023763	Pum3	99	87.827	ENSOARG00000013337	PUM3	100	87.827	Ovis_aries
MGP_SPRETEiJ_G0023763	Pum3	99	89.506	ENSPPAG00000041337	PUM3	100	89.506	Pan_paniscus
MGP_SPRETEiJ_G0023763	Pum3	99	86.708	ENSPPRG00000000809	PUM3	100	86.708	Panthera_pardus
MGP_SPRETEiJ_G0023763	Pum3	99	87.172	ENSPTIG00000021934	PUM3	100	87.172	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023763	Pum3	99	89.660	ENSPTRG00000020735	PUM3	100	89.660	Pan_troglodytes
MGP_SPRETEiJ_G0023763	Pum3	99	90.108	ENSPANG00000025118	PUM3	100	90.108	Papio_anubis
MGP_SPRETEiJ_G0023763	Pum3	99	62.137	ENSPKIG00000022249	pum3	99	63.967	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0023763	Pum3	99	71.716	ENSPSIG00000016272	PUM3	100	71.716	Pelodiscus_sinensis
MGP_SPRETEiJ_G0023763	Pum3	76	62.322	ENSPMGG00000021261	pum3	98	62.322	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0023763	Pum3	99	77.932	ENSPEMG00000019340	-	100	87.736	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023763	Pum3	99	74.593	ENSPCIG00000030598	PUM3	93	74.593	Phascolarctos_cinereus
MGP_SPRETEiJ_G0023763	Pum3	91	55.241	ENSPFOG00000001719	pum3	94	55.912	Poecilia_formosa
MGP_SPRETEiJ_G0023763	Pum3	91	55.519	ENSPLAG00000020010	pum3	99	52.968	Poecilia_latipinna
MGP_SPRETEiJ_G0023763	Pum3	91	55.795	ENSPMEG00000017451	pum3	99	53.120	Poecilia_mexicana
MGP_SPRETEiJ_G0023763	Pum3	51	45.833	ENSPREG00000019478	-	69	63.158	Poecilia_reticulata
MGP_SPRETEiJ_G0023763	Pum3	99	89.645	ENSPPYG00000019255	PUM3	100	89.645	Pongo_abelii
MGP_SPRETEiJ_G0023763	Pum3	100	75.463	ENSPCAG00000005797	PUM3	95	75.463	Procavia_capensis
MGP_SPRETEiJ_G0023763	Pum3	99	88.563	ENSPCOG00000027325	PUM3	100	88.563	Propithecus_coquereli
MGP_SPRETEiJ_G0023763	Pum3	100	85.802	ENSPVAG00000016135	PUM3	95	85.802	Pteropus_vampyrus
MGP_SPRETEiJ_G0023763	Pum3	96	55.745	ENSPNYG00000016124	pum3	96	54.688	Pundamilia_nyererei
MGP_SPRETEiJ_G0023763	Pum3	89	65.172	ENSPNAG00000026524	pum3	92	65.172	Pygocentrus_nattereri
MGP_SPRETEiJ_G0023763	Pum3	99	92.736	ENSRNOG00000012574	Pum3	100	92.736	Rattus_norvegicus
MGP_SPRETEiJ_G0023763	Pum3	99	92.427	ENSRNOG00000048356	RGD1308750	100	92.427	Rattus_norvegicus
MGP_SPRETEiJ_G0023763	Pum3	99	90.248	ENSRBIG00000036924	PUM3	100	89.954	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023763	Pum3	99	90.108	ENSRROG00000041089	PUM3	100	90.108	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023763	Pum3	99	89.954	ENSSBOG00000028066	PUM3	100	89.954	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023763	Pum3	99	77.025	ENSSHAG00000003730	PUM3	100	76.733	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023763	Pum3	92	64.967	ENSSFOG00015018778	pum3	95	64.967	Scleropages_formosus
MGP_SPRETEiJ_G0023763	Pum3	86	58.676	ENSSMAG00000013236	pum3	99	53.835	Scophthalmus_maximus
MGP_SPRETEiJ_G0023763	Pum3	89	57.621	ENSSDUG00000001887	pum3	99	53.926	Seriola_dumerili
MGP_SPRETEiJ_G0023763	Pum3	99	54.286	ENSSLDG00000015766	pum3	99	53.662	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0023763	Pum3	96	83.845	ENSSARG00000000579	PUM3	100	83.845	Sorex_araneus
MGP_SPRETEiJ_G0023763	Pum3	99	68.624	ENSSPUG00000001707	PUM3	100	68.624	Sphenodon_punctatus
MGP_SPRETEiJ_G0023763	Pum3	99	51.880	ENSSPAG00000003976	pum3	97	52.786	Stegastes_partitus
MGP_SPRETEiJ_G0023763	Pum3	100	88.117	ENSSSCG00000005227	PUM3	100	88.117	Sus_scrofa
MGP_SPRETEiJ_G0023763	Pum3	99	71.406	ENSTGUG00000005339	PUM3	100	71.406	Taeniopygia_guttata
MGP_SPRETEiJ_G0023763	Pum3	96	55.335	ENSTRUG00000004074	pum3	79	61.450	Takifugu_rubripes
MGP_SPRETEiJ_G0023763	Pum3	90	58.065	ENSTNIG00000010325	pum3	98	56.958	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0023763	Pum3	86	70.736	ENSTBEG00000013058	PUM3	86	70.736	Tupaia_belangeri
MGP_SPRETEiJ_G0023763	Pum3	100	79.938	ENSTTRG00000001062	PUM3	96	79.938	Tursiops_truncatus
MGP_SPRETEiJ_G0023763	Pum3	100	80.401	ENSUMAG00000018443	PUM3	99	83.871	Ursus_maritimus
MGP_SPRETEiJ_G0023763	Pum3	100	87.519	ENSVPAG00000010766	PUM3	99	87.519	Vicugna_pacos
MGP_SPRETEiJ_G0023763	Pum3	100	88.426	ENSVVUG00000006527	PUM3	100	88.426	Vulpes_vulpes
MGP_SPRETEiJ_G0023763	Pum3	99	58.679	ENSXETG00000011707	pum3	96	59.841	Xenopus_tropicalis
MGP_SPRETEiJ_G0023763	Pum3	91	53.987	ENSXCOG00000006725	pum3	87	56.679	Xiphophorus_couchianus
MGP_SPRETEiJ_G0023763	Pum3	91	56.106	ENSXMAG00000002926	pum3	89	55.613	Xiphophorus_maculatus