EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023790 (Gene tree)
Gene ID: -
Gene Symbol: Cstf2t
Alias: 64kDa|tCstF-64
Full Name: cleavage stimulation factor%2C 3' pre-RNA subunit 2%2C tau
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 3573 bases
Position: chr19:28531211-28534783
Accession: 1932622
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0050555	RRM_1	PF00076.22	8.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0050555	-	3573	-	MGP_SPRETEiJ_P0050555	637 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023790's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0023790	Cstf2t	99	63.775	MGP_SPRETEiJ_G0034548	Cstf2	86	87.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023790	Cstf2t	100	87.676	ENSG00000177613	CSTF2T	100	83.645	Homo_sapiens
MGP_SPRETEiJ_G0023790	Cstf2t	100	86.293	ENSAMEG00000015766	CSTF2T	100	81.269	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023790	Cstf2t	54	80.117	ENSANAG00000027508	-	89	79.765	Aotus_nancymaae
MGP_SPRETEiJ_G0023790	Cstf2t	100	84.211	ENSBTAG00000018406	CSTF2T	100	82.362	Bos_taurus
MGP_SPRETEiJ_G0023790	Cstf2t	53	80.294	ENSCJAG00000011554	-	97	79.412	Callithrix_jacchus
MGP_SPRETEiJ_G0023790	Cstf2t	53	73.235	ENSCJAG00000039083	-	93	73.235	Callithrix_jacchus
MGP_SPRETEiJ_G0023790	Cstf2t	95	67.273	ENSCAFG00000015567	CSTF2T	99	96.825	Canis_familiaris
MGP_SPRETEiJ_G0023790	Cstf2t	80	79.572	ENSCAFG00020026426	CSTF2T	100	74.281	Canis_lupus_dingo
MGP_SPRETEiJ_G0023790	Cstf2t	100	87.752	ENSCHIG00000016590	CSTF2T	100	81.019	Capra_hircus
MGP_SPRETEiJ_G0023790	Cstf2t	100	85.000	ENSTSYG00000007750	CSTF2T	100	84.375	Carlito_syrichta
MGP_SPRETEiJ_G0023790	Cstf2t	100	85.429	ENSCPOG00000004195	CSTF2T	100	83.589	Cavia_porcellus
MGP_SPRETEiJ_G0023790	Cstf2t	53	79.706	ENSCCAG00000020816	-	88	79.765	Cebus_capucinus
MGP_SPRETEiJ_G0023790	Cstf2t	53	80.000	ENSCATG00000041868	-	95	80.294	Cercocebus_atys
MGP_SPRETEiJ_G0023790	Cstf2t	100	86.677	ENSCLAG00000017916	CSTF2T	100	83.920	Chinchilla_lanigera
MGP_SPRETEiJ_G0023790	Cstf2t	100	87.363	ENSCSAG00000018437	CSTF2T	100	83.645	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023790	Cstf2t	52	100.000	ENSCHOG00000011888	-	68	91.273	Choloepus_hoffmanni
MGP_SPRETEiJ_G0023790	Cstf2t	53	79.701	ENSCANG00000005843	-	87	80.312	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023790	Cstf2t	100	93.740	ENSCGRG00001003222	Cstf2t	100	93.574	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023790	Cstf2t	100	94.819	ENSCGRG00000008682	Cstf2t	100	94.819	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023790	Cstf2t	63	89.474	ENSCSEG00000002596	-	53	88.614	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0023790	Cstf2t	100	84.711	ENSDNOG00000003283	CSTF2T	100	81.308	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023790	Cstf2t	80	89.084	ENSDORG00000011245	Cstf2t	100	85.848	Dipodomys_ordii
MGP_SPRETEiJ_G0023790	Cstf2t	100	88.438	ENSEASG00005012929	CSTF2T	100	83.775	Equus_asinus_asinus
MGP_SPRETEiJ_G0023790	Cstf2t	100	89.236	ENSECAG00000004701	CSTF2T	100	84.399	Equus_caballus
MGP_SPRETEiJ_G0023790	Cstf2t	84	89.394	ENSELUG00000004079	-	98	77.612	Esox_lucius
MGP_SPRETEiJ_G0023790	Cstf2t	100	88.125	ENSFCAG00000046300	CSTF2T	100	83.463	Felis_catus
MGP_SPRETEiJ_G0023790	Cstf2t	100	88.545	ENSFDAG00000021170	CSTF2T	100	88.854	Fukomys_damarensis
MGP_SPRETEiJ_G0023790	Cstf2t	100	86.583	ENSGGOG00000036416	-	100	83.931	Gorilla_gorilla
MGP_SPRETEiJ_G0023790	Cstf2t	100	86.583	ENSGGOG00000042388	-	100	83.931	Gorilla_gorilla
MGP_SPRETEiJ_G0023790	Cstf2t	80	86.398	ENSHGLG00000015478	CSTF2T	100	82.716	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023790	Cstf2t	80	86.398	ENSHGLG00100000336	CSTF2T	100	83.205	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023790	Cstf2t	100	87.500	ENSSTOG00000026303	CSTF2T	100	84.062	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023790	Cstf2t	100	77.344	ENSLAFG00000002058	CSTF2T	100	79.531	Loxodonta_africana
MGP_SPRETEiJ_G0023790	Cstf2t	52	79.880	ENSMFAG00000042009	-	93	80.625	Macaca_fascicularis
MGP_SPRETEiJ_G0023790	Cstf2t	54	79.472	ENSMMUG00000042906	-	99	79.765	Macaca_mulatta
MGP_SPRETEiJ_G0023790	Cstf2t	52	79.880	ENSMNEG00000031410	-	93	80.625	Macaca_nemestrina
MGP_SPRETEiJ_G0023790	Cstf2t	100	95.133	ENSMAUG00000006359	Cstf2t	100	95.133	Mesocricetus_auratus
MGP_SPRETEiJ_G0023790	Cstf2t	100	85.358	ENSMICG00000000867	-	100	85.514	Microcebus_murinus
MGP_SPRETEiJ_G0023790	Cstf2t	100	80.811	ENSMICG00000030551	-	100	81.585	Microcebus_murinus
MGP_SPRETEiJ_G0023790	Cstf2t	100	89.045	ENSMOCG00000020428	Cstf2t	100	88.125	Microtus_ochrogaster
MGP_SPRETEiJ_G0023790	Cstf2t	51	75.769	ENSMALG00000008842	-	98	79.032	Monopterus_albus
MGP_SPRETEiJ_G0023790	Cstf2t	100	97.645	MGP_CAROLIEiJ_G0022872	Cstf2t	100	97.645	Mus_caroli
MGP_SPRETEiJ_G0023790	Cstf2t	100	98.744	ENSMUSG00000053536	Cstf2t	100	98.744	Mus_musculus
MGP_SPRETEiJ_G0023790	Cstf2t	100	97.050	MGP_PahariEiJ_G0014365	Cstf2t	100	97.050	Mus_pahari
MGP_SPRETEiJ_G0023790	Cstf2t	100	86.562	ENSMPUG00000020141	CSTF2T	100	83.906	Mustela_putorius_furo
MGP_SPRETEiJ_G0023790	Cstf2t	100	86.544	ENSMLUG00000011187	-	100	81.498	Myotis_lucifugus
MGP_SPRETEiJ_G0023790	Cstf2t	100	77.570	ENSMLUG00000027140	-	100	76.791	Myotis_lucifugus
MGP_SPRETEiJ_G0023790	Cstf2t	100	89.219	ENSNGAG00000003304	Cstf2t	100	87.363	Nannospalax_galili
MGP_SPRETEiJ_G0023790	Cstf2t	100	83.851	ENSNLEG00000012025	CSTF2T	100	80.901	Nomascus_leucogenys
MGP_SPRETEiJ_G0023790	Cstf2t	100	81.874	ENSODEG00000012386	CSTF2T	100	79.877	Octodon_degus
MGP_SPRETEiJ_G0023790	Cstf2t	81	84.170	ENSOCUG00000004647	-	100	95.161	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023790	Cstf2t	100	87.344	ENSOGAG00000014565	CSTF2T	100	84.062	Otolemur_garnettii
MGP_SPRETEiJ_G0023790	Cstf2t	100	86.738	ENSOARG00000013688	-	100	81.595	Ovis_aries
MGP_SPRETEiJ_G0023790	Cstf2t	100	86.482	ENSOARG00000019124	-	100	83.359	Ovis_aries
MGP_SPRETEiJ_G0023790	Cstf2t	53	77.015	ENSPPAG00000032242	-	91	77.500	Pan_paniscus
MGP_SPRETEiJ_G0023790	Cstf2t	100	87.969	ENSPPRG00000018659	CSTF2T	100	83.151	Panthera_pardus
MGP_SPRETEiJ_G0023790	Cstf2t	100	85.625	ENSPTIG00000021145	CSTF2T	100	82.188	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023790	Cstf2t	53	77.015	ENSPTRG00000043097	-	91	77.500	Pan_troglodytes
MGP_SPRETEiJ_G0023790	Cstf2t	52	79.880	ENSPANG00000029734	-	93	80.625	Papio_anubis
MGP_SPRETEiJ_G0023790	Cstf2t	99	51.042	ENSPFOG00000016756	CSTF2T	83	88.462	Poecilia_formosa
MGP_SPRETEiJ_G0023790	Cstf2t	100	88.924	ENSPPYG00000002441	CSTF2T	100	84.867	Pongo_abelii
MGP_SPRETEiJ_G0023790	Cstf2t	82	85.822	ENSPCAG00000000046	CSTF2T	100	82.609	Procavia_capensis
MGP_SPRETEiJ_G0023790	Cstf2t	99	85.759	ENSPCOG00000010982	CSTF2T	99	84.555	Propithecus_coquereli
MGP_SPRETEiJ_G0023790	Cstf2t	100	86.875	ENSPVAG00000006274	CSTF2T	100	83.906	Pteropus_vampyrus
MGP_SPRETEiJ_G0023790	Cstf2t	100	96.395	ENSRNOG00000050289	Cstf2t	100	96.395	Rattus_norvegicus
MGP_SPRETEiJ_G0023790	Cstf2t	100	86.583	ENSRBIG00000029324	CSTF2T	100	84.112	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023790	Cstf2t	100	86.739	ENSRROG00000042507	CSTF2T	100	84.268	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023790	Cstf2t	100	86.562	ENSSBOG00000022638	CSTF2T	100	84.243	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023790	Cstf2t	88	89.811	ENSSARG00000002013	-	80	98.544	Sorex_araneus
MGP_SPRETEiJ_G0023790	Cstf2t	100	88.750	ENSSSCG00000010430	CSTF2T	100	85.469	Sus_scrofa
MGP_SPRETEiJ_G0023790	Cstf2t	99	58.945	ENSTRUG00000004323	-	51	88.889	Takifugu_rubripes
MGP_SPRETEiJ_G0023790	Cstf2t	100	72.500	ENSTBEG00000014379	CSTF2T	100	72.231	Tupaia_belangeri
MGP_SPRETEiJ_G0023790	Cstf2t	100	88.438	ENSTTRG00000003341	CSTF2T	100	83.463	Tursiops_truncatus
MGP_SPRETEiJ_G0023790	Cstf2t	100	86.963	ENSUMAG00000011141	CSTF2T	100	81.748	Ursus_maritimus
MGP_SPRETEiJ_G0023790	Cstf2t	61	96.020	ENSVVUG00000002575	CSTF2T	97	95.631	Vulpes_vulpes