EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023829 (Gene tree)
Gene ID: -
Gene Symbol: Cpeb3
Alias: 4831444O18Rik
Full Name: cytoplasmic polyadenylation element binding protein 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 201453 bases
Position: chr19:34297168-34498620
Accession: 2443075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0050648	RRM_1	PF00076.22	7.9e-12	1	1
MGP_SPRETEiJ_P0050653	RRM_1	PF00076.22	3.1e-11	1	1
MGP_SPRETEiJ_P0050651	RRM_1	PF00076.22	3.1e-11	1	1
MGP_SPRETEiJ_P0050649	RRM_1	PF00076.22	3.2e-11	1	1
MGP_SPRETEiJ_P0050647	RRM_1	PF00076.22	3.4e-11	1	1
MGP_SPRETEiJ_P0050650	RRM_1	PF00076.22	3.4e-11	1	1
MGP_SPRETEiJ_P0050652	RRM_1	PF00076.22	3.4e-11	1	1
MGP_SPRETEiJ_P0050654	RRM_1	PF00076.22	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0050654	-	2104	-	MGP_SPRETEiJ_P0050654	564 (aa)	-	-
MGP_SPRETEiJ_T0050658	-	459	-	MGP_SPRETEiJ_P0050658	98 (aa)	-	-
MGP_SPRETEiJ_T0050648	-	4819	-	MGP_SPRETEiJ_P0050648	415 (aa)	-	UPI00005A81FF
MGP_SPRETEiJ_T0050649	-	5276	-	MGP_SPRETEiJ_P0050649	702 (aa)	-	-
MGP_SPRETEiJ_T0050651	-	4235	-	MGP_SPRETEiJ_P0050651	696 (aa)	-	-
MGP_SPRETEiJ_T0050650	-	5686	-	MGP_SPRETEiJ_P0050650	719 (aa)	-	-
MGP_SPRETEiJ_T0050653	-	2420	-	MGP_SPRETEiJ_P0050653	688 (aa)	-	-
MGP_SPRETEiJ_T0050652	-	3157	-	MGP_SPRETEiJ_P0050652	719 (aa)	-	-
MGP_SPRETEiJ_T0050655	-	667	-	MGP_SPRETEiJ_P0050655	182 (aa)	-	-
MGP_SPRETEiJ_T0050647	-	5915	-	MGP_SPRETEiJ_P0050647	719 (aa)	-	-
MGP_SPRETEiJ_T0050657	-	674	-	MGP_SPRETEiJ_P0050657	120 (aa)	-	-
MGP_SPRETEiJ_T0050656	-	566	-	MGP_SPRETEiJ_P0050656	130 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0023829	Cpeb3	100	75.418	MGP_SPRETEiJ_G0017016	Cpeb4	99	80.250
MGP_SPRETEiJ_G0023829	Cpeb3	100	78.037	MGP_SPRETEiJ_G0028187	-	99	61.736

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.590	ENSG00000107864	CPEB3	100	96.738	Homo_sapiens
MGP_SPRETEiJ_G0023829	Cpeb3	100	89.157	ENSAPOG00000003625	cpeb3	100	74.656	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.636	ENSAMEG00000014204	CPEB3	100	90.000	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023829	Cpeb3	100	87.470	ENSACIG00000001933	cpeb3	100	74.176	Amphilophus_citrinellus
MGP_SPRETEiJ_G0023829	Cpeb3	100	87.234	ENSAOCG00000015423	cpeb3	100	74.586	Amphiprion_ocellaris
MGP_SPRETEiJ_G0023829	Cpeb3	100	85.060	ENSATEG00000010649	cpeb3	100	74.608	Anabas_testudineus
MGP_SPRETEiJ_G0023829	Cpeb3	73	90.850	ENSAPLG00000014437	CPEB4	100	90.850	Anas_platyrhynchos
MGP_SPRETEiJ_G0023829	Cpeb3	100	96.690	ENSACAG00000006335	CPEB3	100	85.457	Anolis_carolinensis
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSANAG00000037406	CPEB3	100	96.819	Aotus_nancymaae
MGP_SPRETEiJ_G0023829	Cpeb3	100	86.998	ENSACLG00000018590	cpeb3	89	74.171	Astatotilapia_calliptera
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.349	ENSBTAG00000015450	CPEB3	100	96.875	Bos_taurus
MGP_SPRETEiJ_G0023829	Cpeb3	100	100.000	ENSCJAG00000008495	CPEB3	100	96.810	Callithrix_jacchus
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.388	ENSCAFG00000007423	CPEB3	100	97.388	Canis_familiaris
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.867	ENSCAFG00020001981	CPEB3	100	96.528	Canis_lupus_dingo
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.636	ENSCHIG00000017337	CPEB3	100	97.226	Capra_hircus
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.590	ENSTSYG00000003928	CPEB3	83	100.000	Carlito_syrichta
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSCCAG00000033267	CPEB3	100	97.091	Cebus_capucinus
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSCATG00000038447	CPEB3	100	96.953	Cercocebus_atys
MGP_SPRETEiJ_G0023829	Cpeb3	100	100.000	ENSCLAG00000011817	CPEB3	100	97.600	Chinchilla_lanigera
MGP_SPRETEiJ_G0023829	Cpeb3	100	96.671	ENSCSAG00000006579	CPEB3	100	96.671	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023829	Cpeb3	90	87.634	ENSCHOG00000000272	-	100	90.083	Choloepus_hoffmanni
MGP_SPRETEiJ_G0023829	Cpeb3	100	98.313	ENSCPBG00000023779	CPEB3	100	85.298	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSCANG00000040306	CPEB3	100	96.953	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023829	Cpeb3	100	98.611	ENSCGRG00001003846	Cpeb3	100	98.611	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023829	Cpeb3	100	99.759	ENSCGRG00000002839	Cpeb3	100	99.759	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023829	Cpeb3	100	76.786	ENSCSEG00000008423	cpeb3	100	72.516	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0023829	Cpeb3	100	84.670	ENSCVAG00000005998	cpeb3	100	70.580	Cyprinodon_variegatus
MGP_SPRETEiJ_G0023829	Cpeb3	100	80.516	ENSDARG00000060103	cpeb3	100	67.096	Danio_rerio
MGP_SPRETEiJ_G0023829	Cpeb3	100	91.148	ENSDNOG00000048639	CPEB3	100	90.806	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSDORG00000028940	Cpeb3	89	99.793	Dipodomys_ordii
MGP_SPRETEiJ_G0023829	Cpeb3	100	89.639	ENSETEG00000000111	CPEB3	100	89.347	Echinops_telfairi
MGP_SPRETEiJ_G0023829	Cpeb3	99	76.303	ENSEBUG00000010745	cpeb3	79	63.158	Eptatretus_burgeri
MGP_SPRETEiJ_G0023829	Cpeb3	100	99.759	ENSEASG00005011095	CPEB3	100	97.917	Equus_asinus_asinus
MGP_SPRETEiJ_G0023829	Cpeb3	100	99.759	ENSECAG00000000077	CPEB3	100	97.917	Equus_caballus
MGP_SPRETEiJ_G0023829	Cpeb3	100	90.120	ENSELUG00000019251	cpeb3	100	74.856	Esox_lucius
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.636	ENSFCAG00000032380	CPEB3	100	97.222	Felis_catus
MGP_SPRETEiJ_G0023829	Cpeb3	100	91.489	ENSFALG00000007952	CPEB3	87	85.387	Ficedula_albicollis
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSFDAG00000016459	CPEB3	88	100.000	Fukomys_damarensis
MGP_SPRETEiJ_G0023829	Cpeb3	100	86.811	ENSFHEG00000021371	cpeb3	100	69.601	Fundulus_heteroclitus
MGP_SPRETEiJ_G0023829	Cpeb3	82	87.356	ENSGMOG00000008307	cpeb3	99	71.008	Gadus_morhua
MGP_SPRETEiJ_G0023829	Cpeb3	100	98.795	ENSGALG00000006912	CPEB3	100	85.714	Gallus_gallus
MGP_SPRETEiJ_G0023829	Cpeb3	99	86.667	ENSGACG00000002944	cpeb3	99	73.640	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0023829	Cpeb3	100	98.313	ENSGAGG00000008528	CPEB3	100	84.882	Gopherus_agassizii
MGP_SPRETEiJ_G0023829	Cpeb3	100	100.000	ENSGGOG00000016441	CPEB3	100	97.091	Gorilla_gorilla
MGP_SPRETEiJ_G0023829	Cpeb3	100	89.157	ENSHBUG00000004097	cpeb3	93	74.309	Haplochromis_burtoni
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSHGLG00000014022	CPEB3	100	97.083	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.636	ENSHGLG00100005200	CPEB3	100	89.013	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023829	Cpeb3	100	87.470	ENSHCOG00000005747	cpeb3	100	70.596	Hippocampus_comes
MGP_SPRETEiJ_G0023829	Cpeb3	100	90.120	ENSIPUG00000018571	cpeb3	100	74.341	Ictalurus_punctatus
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSSTOG00000028061	CPEB3	100	95.146	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023829	Cpeb3	100	100.000	ENSJJAG00000009135	Cpeb3	100	100.000	Jaculus_jaculus
MGP_SPRETEiJ_G0023829	Cpeb3	100	89.157	ENSLBEG00000025961	cpeb3	100	74.448	Labrus_bergylta
MGP_SPRETEiJ_G0023829	Cpeb3	100	89.598	ENSLACG00000011307	CPEB3	92	81.034	Latimeria_chalumnae
MGP_SPRETEiJ_G0023829	Cpeb3	100	88.180	ENSLOCG00000007131	cpeb3	100	75.519	Lepisosteus_oculatus
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.400	ENSLAFG00000018716	CPEB3	100	96.399	Loxodonta_africana
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.590	ENSMFAG00000025613	CPEB3	100	89.174	Macaca_fascicularis
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSMMUG00000015050	CPEB3	100	96.537	Macaca_mulatta
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSMNEG00000045465	CPEB3	100	96.819	Macaca_nemestrina
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.590	ENSMLEG00000031794	CPEB3	100	95.787	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023829	Cpeb3	100	89.639	ENSMAMG00000012794	cpeb3	100	73.684	Mastacembelus_armatus
MGP_SPRETEiJ_G0023829	Cpeb3	100	88.916	ENSMZEG00005012068	cpeb3	100	74.171	Maylandia_zebra
MGP_SPRETEiJ_G0023829	Cpeb3	100	91.489	ENSMGAG00000009148	CPEB3	99	85.244	Meleagris_gallopavo
MGP_SPRETEiJ_G0023829	Cpeb3	100	99.168	ENSMAUG00000002789	Cpeb3	100	99.168	Mesocricetus_auratus
MGP_SPRETEiJ_G0023829	Cpeb3	100	99.759	ENSMICG00000026866	CPEB3	100	95.983	Microcebus_murinus
MGP_SPRETEiJ_G0023829	Cpeb3	100	99.028	ENSMOCG00000016486	Cpeb3	100	99.028	Microtus_ochrogaster
MGP_SPRETEiJ_G0023829	Cpeb3	94	84.439	ENSMMOG00000008209	cpeb3	88	73.433	Mola_mola
MGP_SPRETEiJ_G0023829	Cpeb3	100	91.726	ENSMODG00000006673	CPEB3	100	85.130	Monodelphis_domestica
MGP_SPRETEiJ_G0023829	Cpeb3	100	87.711	ENSMALG00000009305	cpeb3	93	95.270	Monopterus_albus
MGP_SPRETEiJ_G0023829	Cpeb3	100	100.000	MGP_CAROLIEiJ_G0022910	Cpeb3	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0023829	Cpeb3	100	100.000	ENSMUSG00000039652	Cpeb3	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0023829	Cpeb3	100	100.000	MGP_PahariEiJ_G0014405	Cpeb3	100	100.000	Mus_pahari
MGP_SPRETEiJ_G0023829	Cpeb3	100	96.991	ENSMPUG00000017227	CPEB3	100	96.991	Mustela_putorius_furo
MGP_SPRETEiJ_G0023829	Cpeb3	100	99.759	ENSNGAG00000015621	Cpeb3	100	97.636	Nannospalax_galili
MGP_SPRETEiJ_G0023829	Cpeb3	100	83.848	ENSNBRG00000018343	cpeb3	91	73.104	Neolamprologus_brichardi
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSNLEG00000012600	CPEB3	100	97.230	Nomascus_leucogenys
MGP_SPRETEiJ_G0023829	Cpeb3	90	90.591	ENSMEUG00000009948	-	75	92.837	Notamacropus_eugenii
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSODEG00000004591	CPEB3	100	96.438	Octodon_degus
MGP_SPRETEiJ_G0023829	Cpeb3	78	95.758	ENSOANG00000015723	-	100	98.485	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSOCUG00000010454	CPEB3	100	96.949	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023829	Cpeb3	100	82.494	ENSORLG00000000726	cpeb3	100	71.676	Oryzias_latipes
MGP_SPRETEiJ_G0023829	Cpeb3	100	83.373	ENSORLG00020004475	cpeb3	100	72.493	Oryzias_latipes_hni
MGP_SPRETEiJ_G0023829	Cpeb3	100	86.571	ENSORLG00015011683	cpeb3	100	72.493	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0023829	Cpeb3	100	83.133	ENSOMEG00000018265	cpeb3	93	71.203	Oryzias_melastigma
MGP_SPRETEiJ_G0023829	Cpeb3	100	95.540	ENSOGAG00000002002	CPEB3	100	95.540	Otolemur_garnettii
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.097	ENSOARG00000016671	CPEB3	100	97.097	Ovis_aries
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.349	ENSPPAG00000031528	CPEB3	100	97.996	Pan_paniscus
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.097	ENSPPRG00000015654	CPEB3	100	97.097	Panthera_pardus
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.349	ENSPTIG00000012018	CPEB3	97	99.655	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSPTRG00000002753	CPEB3	100	96.680	Pan_troglodytes
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.590	ENSPANG00000021561	CPEB3	100	95.887	Papio_anubis
MGP_SPRETEiJ_G0023829	Cpeb3	100	90.361	ENSPKIG00000015878	cpeb3	100	77.110	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0023829	Cpeb3	100	81.055	ENSPMGG00000022722	cpeb3	100	64.613	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0023829	Cpeb3	100	99.167	ENSPEMG00000008448	Cpeb3	100	99.167	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023829	Cpeb3	100	99.036	ENSPCIG00000017302	CPEB3	100	86.382	Phascolarctos_cinereus
MGP_SPRETEiJ_G0023829	Cpeb3	100	81.368	ENSPFOG00000011231	cpeb3	100	70.487	Poecilia_formosa
MGP_SPRETEiJ_G0023829	Cpeb3	100	87.019	ENSPLAG00000002852	cpeb3	100	71.389	Poecilia_latipinna
MGP_SPRETEiJ_G0023829	Cpeb3	100	87.019	ENSPMEG00000021572	cpeb3	100	72.222	Poecilia_mexicana
MGP_SPRETEiJ_G0023829	Cpeb3	100	87.260	ENSPREG00000003085	cpeb3	100	72.514	Poecilia_reticulata
MGP_SPRETEiJ_G0023829	Cpeb3	100	92.330	ENSPPYG00000002481	CPEB3	100	92.330	Pongo_abelii
MGP_SPRETEiJ_G0023829	Cpeb3	100	91.084	ENSPCAG00000012417	CPEB3	100	90.169	Procavia_capensis
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.636	ENSPCOG00000023690	CPEB3	100	96.667	Propithecus_coquereli
MGP_SPRETEiJ_G0023829	Cpeb3	90	96.505	ENSPVAG00000007664	CPEB3	80	99.174	Pteropus_vampyrus
MGP_SPRETEiJ_G0023829	Cpeb3	100	89.157	ENSPNYG00000005300	cpeb3	100	74.309	Pundamilia_nyererei
MGP_SPRETEiJ_G0023829	Cpeb3	100	89.398	ENSPNAG00000012111	cpeb3	100	75.967	Pygocentrus_nattereri
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.465	ENSRNOG00000020689	Cpeb3	94	97.465	Rattus_norvegicus
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.872	ENSRBIG00000041079	CPEB3	100	96.537	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023829	Cpeb3	100	100.000	ENSRROG00000031558	CPEB3	100	96.537	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023829	Cpeb3	100	93.735	ENSSBOG00000035843	CPEB3	100	97.872	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023829	Cpeb3	53	99.087	ENSSHAG00000018596	-	96	99.087	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023829	Cpeb3	100	86.506	ENSSFOG00015004974	cpeb3	100	74.392	Scleropages_formosus
MGP_SPRETEiJ_G0023829	Cpeb3	100	77.197	ENSSFOG00015018275	-	99	80.637	Scleropages_formosus
MGP_SPRETEiJ_G0023829	Cpeb3	100	89.880	ENSSMAG00000013924	cpeb3	100	75.036	Scophthalmus_maximus
MGP_SPRETEiJ_G0023829	Cpeb3	100	85.542	ENSSDUG00000019766	cpeb3	100	74.319	Seriola_dumerili
MGP_SPRETEiJ_G0023829	Cpeb3	100	89.639	ENSSLDG00000021438	cpeb3	100	74.315	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0023829	Cpeb3	90	97.043	ENSSARG00000001994	CPEB3	100	99.725	Sorex_araneus
MGP_SPRETEiJ_G0023829	Cpeb3	73	98.671	ENSSPUG00000003601	CPEB3	94	99.087	Sphenodon_punctatus
MGP_SPRETEiJ_G0023829	Cpeb3	100	89.639	ENSSPAG00000004725	cpeb3	100	75.207	Stegastes_partitus
MGP_SPRETEiJ_G0023829	Cpeb3	100	99.759	ENSSSCG00000010468	CPEB3	100	97.685	Sus_scrofa
MGP_SPRETEiJ_G0023829	Cpeb3	100	96.690	ENSTGUG00000008988	CPEB3	100	85.714	Taeniopygia_guttata
MGP_SPRETEiJ_G0023829	Cpeb3	53	92.760	ENSTRUG00000011309	cpeb3	88	92.760	Takifugu_rubripes
MGP_SPRETEiJ_G0023829	Cpeb3	100	90.602	ENSTBEG00000013125	-	60	92.548	Tupaia_belangeri
MGP_SPRETEiJ_G0023829	Cpeb3	100	93.253	ENSTTRG00000012334	CPEB3	100	92.482	Tursiops_truncatus
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.867	ENSUAMG00000010827	CPEB3	100	94.298	Ursus_americanus
MGP_SPRETEiJ_G0023829	Cpeb3	73	96.358	ENSUMAG00000001870	-	97	98.951	Ursus_maritimus
MGP_SPRETEiJ_G0023829	Cpeb3	100	97.418	ENSVVUG00000021375	CPEB3	100	97.418	Vulpes_vulpes
MGP_SPRETEiJ_G0023829	Cpeb3	100	87.943	ENSXETG00000012190	cpeb3	98	77.208	Xenopus_tropicalis
MGP_SPRETEiJ_G0023829	Cpeb3	100	83.173	ENSXCOG00000006122	cpeb3	100	71.408	Xiphophorus_couchianus
MGP_SPRETEiJ_G0023829	Cpeb3	100	84.375	ENSXMAG00000007652	cpeb3	94	93.836	Xiphophorus_maculatus