EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023878 (Gene tree)
Gene ID: -
Gene Symbol: Rrp12
Alias: -
Full Name: ribosomal RNA processing 12 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 32577 bases
Position: chr19:39252961-39285537
Accession: 2147437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0050791	NUC173	PF08161.12	2.7e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0050791	-	4319	-	MGP_SPRETEiJ_P0050791	1295 (aa)	-	-
MGP_SPRETEiJ_T0050792	-	2580	-	MGP_SPRETEiJ_P0050792	806 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023878	Rrp12	99	90.131	ENSG00000052749	RRP12	100	96.875	Homo_sapiens
MGP_SPRETEiJ_G0023878	Rrp12	99	63.524	ENSAPOG00000013355	rrp12	99	62.855	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0023878	Rrp12	99	88.992	ENSAMEG00000000134	RRP12	99	89.222	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023878	Rrp12	99	64.313	ENSACIG00000022673	rrp12	99	64.253	Amphilophus_citrinellus
MGP_SPRETEiJ_G0023878	Rrp12	99	64.419	ENSAOCG00000016149	rrp12	99	64.203	Amphiprion_ocellaris
MGP_SPRETEiJ_G0023878	Rrp12	99	63.932	ENSAPEG00000016023	rrp12	99	63.720	Amphiprion_percula
MGP_SPRETEiJ_G0023878	Rrp12	99	63.284	ENSATEG00000022627	rrp12	99	63.154	Anabas_testudineus
MGP_SPRETEiJ_G0023878	Rrp12	96	65.107	ENSAPLG00000014387	RRP12	99	65.186	Anas_platyrhynchos
MGP_SPRETEiJ_G0023878	Rrp12	99	65.204	ENSACAG00000002175	RRP12	99	65.358	Anolis_carolinensis
MGP_SPRETEiJ_G0023878	Rrp12	99	89.104	ENSANAG00000037485	RRP12	99	89.474	Aotus_nancymaae
MGP_SPRETEiJ_G0023878	Rrp12	99	63.566	ENSACLG00000007354	rrp12	99	63.818	Astatotilapia_calliptera
MGP_SPRETEiJ_G0023878	Rrp12	99	60.910	ENSAMXG00000012852	rrp12	99	61.622	Astyanax_mexicanus
MGP_SPRETEiJ_G0023878	Rrp12	99	89.522	ENSBTAG00000002191	RRP12	99	89.445	Bos_taurus
MGP_SPRETEiJ_G0023878	Rrp12	85	88.738	ENSCJAG00000016549	-	99	88.828	Callithrix_jacchus
MGP_SPRETEiJ_G0023878	Rrp12	99	89.000	ENSCAFG00000009043	RRP12	99	89.000	Canis_familiaris
MGP_SPRETEiJ_G0023878	Rrp12	99	89.000	ENSCAFG00020005991	RRP12	99	89.000	Canis_lupus_dingo
MGP_SPRETEiJ_G0023878	Rrp12	99	86.840	ENSCHIG00000011876	RRP12	99	86.534	Capra_hircus
MGP_SPRETEiJ_G0023878	Rrp12	53	83.908	ENSTSYG00000030210	-	99	84.195	Carlito_syrichta
MGP_SPRETEiJ_G0023878	Rrp12	96	82.080	ENSCAPG00000008991	RRP12	98	82.000	Cavia_aperea
MGP_SPRETEiJ_G0023878	Rrp12	99	90.193	ENSCPOG00000004215	RRP12	99	90.116	Cavia_porcellus
MGP_SPRETEiJ_G0023878	Rrp12	70	86.294	ENSCCAG00000033123	-	83	86.952	Cebus_capucinus
MGP_SPRETEiJ_G0023878	Rrp12	80	88.314	ENSCCAG00000024088	RRP12	99	92.308	Cebus_capucinus
MGP_SPRETEiJ_G0023878	Rrp12	99	84.170	ENSCATG00000045310	RRP12	99	84.170	Cercocebus_atys
MGP_SPRETEiJ_G0023878	Rrp12	99	90.116	ENSCLAG00000003753	RRP12	99	90.270	Chinchilla_lanigera
MGP_SPRETEiJ_G0023878	Rrp12	88	89.791	ENSCSAG00000005877	RRP12	99	89.965	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023878	Rrp12	59	92.308	ENSCHOG00000003095	-	61	92.308	Choloepus_hoffmanni
MGP_SPRETEiJ_G0023878	Rrp12	94	72.824	ENSCPBG00000011935	RRP12	97	73.071	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023878	Rrp12	64	39.440	ENSCSAVG00000006059	-	99	39.110	Ciona_savignyi
MGP_SPRETEiJ_G0023878	Rrp12	99	90.285	ENSCANG00000031653	RRP12	99	90.789	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023878	Rrp12	90	94.615	ENSCGRG00001004338	Rrp12	99	94.615	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023878	Rrp12	99	93.349	ENSCGRG00000011965	Rrp12	99	93.349	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023878	Rrp12	99	62.018	ENSCSEG00000007799	rrp12	99	61.941	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0023878	Rrp12	99	64.469	ENSCVAG00000003418	rrp12	99	64.253	Cyprinodon_variegatus
MGP_SPRETEiJ_G0023878	Rrp12	99	61.188	ENSDARG00000022410	rrp12	99	61.592	Danio_rerio
MGP_SPRETEiJ_G0023878	Rrp12	99	87.040	ENSDNOG00000005120	RRP12	99	86.043	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023878	Rrp12	99	90.278	ENSDORG00000009199	Rrp12	99	90.278	Dipodomys_ordii
MGP_SPRETEiJ_G0023878	Rrp12	93	75.404	ENSETEG00000002455	RRP12	93	74.955	Echinops_telfairi
MGP_SPRETEiJ_G0023878	Rrp12	87	57.333	ENSEBUG00000006555	rrp12	98	63.830	Eptatretus_burgeri
MGP_SPRETEiJ_G0023878	Rrp12	99	89.900	ENSEASG00005008693	RRP12	99	89.977	Equus_asinus_asinus
MGP_SPRETEiJ_G0023878	Rrp12	94	89.828	ENSECAG00000010892	RRP12	99	89.910	Equus_caballus
MGP_SPRETEiJ_G0023878	Rrp12	63	82.275	ENSEEUG00000005447	-	70	71.698	Erinaceus_europaeus
MGP_SPRETEiJ_G0023878	Rrp12	99	64.022	ENSELUG00000010510	rrp12	100	63.667	Esox_lucius
MGP_SPRETEiJ_G0023878	Rrp12	99	89.154	ENSFCAG00000028639	RRP12	99	90.789	Felis_catus
MGP_SPRETEiJ_G0023878	Rrp12	94	71.089	ENSFALG00000008458	RRP12	99	70.844	Ficedula_albicollis
MGP_SPRETEiJ_G0023878	Rrp12	99	89.344	ENSFDAG00000019108	RRP12	95	89.498	Fukomys_damarensis
MGP_SPRETEiJ_G0023878	Rrp12	99	58.450	ENSFHEG00000004148	rrp12	99	58.166	Fundulus_heteroclitus
MGP_SPRETEiJ_G0023878	Rrp12	99	58.295	ENSGMOG00000004188	rrp12	99	58.372	Gadus_morhua
MGP_SPRETEiJ_G0023878	Rrp12	99	69.355	ENSGALG00000041331	RRP12	96	70.638	Gallus_gallus
MGP_SPRETEiJ_G0023878	Rrp12	99	64.003	ENSGAFG00000009038	rrp12	99	63.790	Gambusia_affinis
MGP_SPRETEiJ_G0023878	Rrp12	99	61.550	ENSGACG00000007175	rrp12	99	61.278	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0023878	Rrp12	67	74.942	ENSGAGG00000019169	RRP12	96	74.942	Gopherus_agassizii
MGP_SPRETEiJ_G0023878	Rrp12	99	90.362	ENSGGOG00000014850	RRP12	99	90.789	Gorilla_gorilla
MGP_SPRETEiJ_G0023878	Rrp12	99	63.721	ENSHBUG00000023527	rrp12	99	63.972	Haplochromis_burtoni
MGP_SPRETEiJ_G0023878	Rrp12	99	89.498	ENSHGLG00000016772	RRP12	99	89.653	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023878	Rrp12	99	89.498	ENSHGLG00100015110	RRP12	99	89.653	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023878	Rrp12	99	62.210	ENSHCOG00000019519	rrp12	99	62.287	Hippocampus_comes
MGP_SPRETEiJ_G0023878	Rrp12	99	60.910	ENSIPUG00000000311	RRP12	99	61.218	Ictalurus_punctatus
MGP_SPRETEiJ_G0023878	Rrp12	99	91.042	ENSSTOG00000006515	RRP12	99	91.042	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023878	Rrp12	96	91.186	ENSJJAG00000000110	Rrp12	99	91.186	Jaculus_jaculus
MGP_SPRETEiJ_G0023878	Rrp12	99	63.721	ENSKMAG00000020621	rrp12	99	63.636	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0023878	Rrp12	99	61.592	ENSLBEG00000015335	rrp12	99	61.824	Labrus_bergylta
MGP_SPRETEiJ_G0023878	Rrp12	78	57.391	ENSLACG00000016633	RRP12	81	66.667	Latimeria_chalumnae
MGP_SPRETEiJ_G0023878	Rrp12	99	62.250	ENSLOCG00000003846	rrp12	99	62.327	Lepisosteus_oculatus
MGP_SPRETEiJ_G0023878	Rrp12	100	89.785	ENSLAFG00000015965	RRP12	100	89.401	Loxodonta_africana
MGP_SPRETEiJ_G0023878	Rrp12	99	90.362	ENSMFAG00000041558	RRP12	99	90.517	Macaca_fascicularis
MGP_SPRETEiJ_G0023878	Rrp12	99	90.362	ENSMMUG00000019634	RRP12	99	90.517	Macaca_mulatta
MGP_SPRETEiJ_G0023878	Rrp12	99	86.122	ENSMNEG00000036759	RRP12	99	90.132	Macaca_nemestrina
MGP_SPRETEiJ_G0023878	Rrp12	99	84.402	ENSMLEG00000041317	RRP12	99	90.789	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023878	Rrp12	99	62.675	ENSMAMG00000002964	rrp12	99	63.197	Mastacembelus_armatus
MGP_SPRETEiJ_G0023878	Rrp12	99	63.721	ENSMZEG00005003241	rrp12	99	63.972	Maylandia_zebra
MGP_SPRETEiJ_G0023878	Rrp12	99	68.328	ENSMGAG00000009829	RRP12	99	68.175	Meleagris_gallopavo
MGP_SPRETEiJ_G0023878	Rrp12	99	91.365	ENSMAUG00000020743	Rrp12	99	91.647	Mesocricetus_auratus
MGP_SPRETEiJ_G0023878	Rrp12	99	89.676	ENSMICG00000007624	RRP12	99	89.676	Microcebus_murinus
MGP_SPRETEiJ_G0023878	Rrp12	99	95.128	ENSMOCG00000006753	Rrp12	99	95.128	Microtus_ochrogaster
MGP_SPRETEiJ_G0023878	Rrp12	99	62.616	ENSMMOG00000010708	rrp12	99	62.693	Mola_mola
MGP_SPRETEiJ_G0023878	Rrp12	99	78.251	ENSMODG00000004315	RRP12	99	78.516	Monodelphis_domestica
MGP_SPRETEiJ_G0023878	Rrp12	99	60.078	ENSMALG00000016560	rrp12	99	63.568	Monopterus_albus
MGP_SPRETEiJ_G0023878	Rrp12	99	98.315	MGP_CAROLIEiJ_G0022957	Rrp12	99	98.315	Mus_caroli
MGP_SPRETEiJ_G0023878	Rrp12	100	99.614	ENSMUSG00000035049	Rrp12	100	99.614	Mus_musculus
MGP_SPRETEiJ_G0023878	Rrp12	99	98.144	MGP_PahariEiJ_G0014447	Rrp12	99	98.144	Mus_pahari
MGP_SPRETEiJ_G0023878	Rrp12	99	88.923	ENSMPUG00000017046	RRP12	99	88.769	Mustela_putorius_furo
MGP_SPRETEiJ_G0023878	Rrp12	99	89.547	ENSMLUG00000017160	RRP12	99	89.700	Myotis_lucifugus
MGP_SPRETEiJ_G0023878	Rrp12	99	92.968	ENSNGAG00000024144	Rrp12	99	93.045	Nannospalax_galili
MGP_SPRETEiJ_G0023878	Rrp12	99	63.199	ENSNBRG00000009987	rrp12	99	63.146	Neolamprologus_brichardi
MGP_SPRETEiJ_G0023878	Rrp12	92	90.789	ENSNLEG00000013762	RRP12	99	90.789	Nomascus_leucogenys
MGP_SPRETEiJ_G0023878	Rrp12	99	73.205	ENSMEUG00000003185	RRP12	99	73.050	Notamacropus_eugenii
MGP_SPRETEiJ_G0023878	Rrp12	94	85.437	ENSOPRG00000005001	RRP12	94	85.275	Ochotona_princeps
MGP_SPRETEiJ_G0023878	Rrp12	99	88.485	ENSODEG00000016439	RRP12	99	88.872	Octodon_degus
MGP_SPRETEiJ_G0023878	Rrp12	99	63.953	ENSONIG00000009528	rrp12	99	64.357	Oreochromis_niloticus
MGP_SPRETEiJ_G0023878	Rrp12	99	72.406	ENSOANG00000006560	RRP12	99	72.406	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023878	Rrp12	99	89.815	ENSOCUG00000005662	RRP12	99	89.892	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023878	Rrp12	99	64.313	ENSORLG00000008688	rrp12	99	64.874	Oryzias_latipes
MGP_SPRETEiJ_G0023878	Rrp12	97	64.534	ENSORLG00020002355	rrp12	99	64.771	Oryzias_latipes_hni
MGP_SPRETEiJ_G0023878	Rrp12	99	64.469	ENSORLG00015006709	rrp12	99	64.638	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0023878	Rrp12	97	64.929	ENSOMEG00000002609	rrp12	99	65.324	Oryzias_melastigma
MGP_SPRETEiJ_G0023878	Rrp12	99	88.411	ENSOGAG00000001626	RRP12	99	87.951	Otolemur_garnettii
MGP_SPRETEiJ_G0023878	Rrp12	99	88.000	ENSOARG00000009681	RRP12	99	87.923	Ovis_aries
MGP_SPRETEiJ_G0023878	Rrp12	97	89.852	ENSPPAG00000043885	RRP12	99	90.789	Pan_paniscus
MGP_SPRETEiJ_G0023878	Rrp12	99	89.077	ENSPPRG00000002029	RRP12	99	91.447	Panthera_pardus
MGP_SPRETEiJ_G0023878	Rrp12	97	88.419	ENSPTIG00000004428	RRP12	99	90.789	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023878	Rrp12	97	89.852	ENSPTRG00000002806	RRP12	99	90.789	Pan_troglodytes
MGP_SPRETEiJ_G0023878	Rrp12	99	90.285	ENSPANG00000021360	RRP12	99	90.789	Papio_anubis
MGP_SPRETEiJ_G0023878	Rrp12	99	64.132	ENSPKIG00000016516	rrp12	99	64.132	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0023878	Rrp12	99	62.189	ENSPMGG00000020217	rrp12	99	61.989	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0023878	Rrp12	99	95.679	ENSPEMG00000008437	Rrp12	99	95.679	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023878	Rrp12	99	47.558	ENSPMAG00000007493	rrp12	99	47.681	Petromyzon_marinus
MGP_SPRETEiJ_G0023878	Rrp12	99	78.130	ENSPCIG00000002157	RRP12	100	78.207	Phascolarctos_cinereus
MGP_SPRETEiJ_G0023878	Rrp12	99	63.770	ENSPFOG00000014975	rrp12	99	63.559	Poecilia_formosa
MGP_SPRETEiJ_G0023878	Rrp12	99	63.538	ENSPLAG00000009840	rrp12	99	63.328	Poecilia_latipinna
MGP_SPRETEiJ_G0023878	Rrp12	99	63.926	ENSPMEG00000021871	rrp12	99	63.713	Poecilia_mexicana
MGP_SPRETEiJ_G0023878	Rrp12	99	63.129	ENSPREG00000020950	rrp12	99	62.923	Poecilia_reticulata
MGP_SPRETEiJ_G0023878	Rrp12	99	88.358	ENSPPYG00000002528	RRP12	99	88.512	Pongo_abelii
MGP_SPRETEiJ_G0023878	Rrp12	94	90.960	ENSPCAG00000008967	RRP12	94	90.960	Procavia_capensis
MGP_SPRETEiJ_G0023878	Rrp12	99	90.656	ENSPCOG00000014009	RRP12	99	90.656	Propithecus_coquereli
MGP_SPRETEiJ_G0023878	Rrp12	99	84.834	ENSPVAG00000003370	RRP12	100	84.988	Pteropus_vampyrus
MGP_SPRETEiJ_G0023878	Rrp12	99	63.898	ENSPNYG00000009451	rrp12	99	64.126	Pundamilia_nyererei
MGP_SPRETEiJ_G0023878	Rrp12	99	61.912	ENSPNAG00000007658	rrp12	99	62.452	Pygocentrus_nattereri
MGP_SPRETEiJ_G0023878	Rrp12	99	96.752	ENSRNOG00000048495	Rrp12	99	96.752	Rattus_norvegicus
MGP_SPRETEiJ_G0023878	Rrp12	99	90.208	ENSRBIG00000021296	RRP12	99	90.789	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023878	Rrp12	99	90.362	ENSRROG00000032482	RRP12	99	90.789	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023878	Rrp12	99	89.206	ENSSBOG00000030992	RRP12	100	88.909	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023878	Rrp12	99	77.409	ENSSHAG00000018275	RRP12	99	77.718	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023878	Rrp12	99	63.587	ENSSFOG00015016400	rrp12	99	63.433	Scleropages_formosus
MGP_SPRETEiJ_G0023878	Rrp12	99	62.684	ENSSMAG00000004047	rrp12	99	63.125	Scophthalmus_maximus
MGP_SPRETEiJ_G0023878	Rrp12	99	63.411	ENSSDUG00000022871	rrp12	99	63.174	Seriola_dumerili
MGP_SPRETEiJ_G0023878	Rrp12	99	63.023	ENSSLDG00000003038	rrp12	99	62.943	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0023878	Rrp12	99	68.098	ENSSPUG00000012221	RRP12	99	68.482	Sphenodon_punctatus
MGP_SPRETEiJ_G0023878	Rrp12	99	64.109	ENSSPAG00000002261	rrp12	99	63.972	Stegastes_partitus
MGP_SPRETEiJ_G0023878	Rrp12	99	89.530	ENSSSCG00000010514	RRP12	99	89.530	Sus_scrofa
MGP_SPRETEiJ_G0023878	Rrp12	88	68.380	ENSTGUG00000009711	RRP12	100	68.293	Taeniopygia_guttata
MGP_SPRETEiJ_G0023878	Rrp12	99	59.014	ENSTRUG00000012017	rrp12	99	59.091	Takifugu_rubripes
MGP_SPRETEiJ_G0023878	Rrp12	99	62.741	ENSTNIG00000016522	rrp12	99	62.818	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0023878	Rrp12	77	89.968	ENSTBEG00000004907	RRP12	80	89.968	Tupaia_belangeri
MGP_SPRETEiJ_G0023878	Rrp12	99	85.593	ENSTTRG00000009878	RRP12	99	85.516	Tursiops_truncatus
MGP_SPRETEiJ_G0023878	Rrp12	99	89.162	ENSUAMG00000009092	RRP12	99	89.008	Ursus_americanus
MGP_SPRETEiJ_G0023878	Rrp12	99	86.595	ENSUMAG00000021621	RRP12	99	86.441	Ursus_maritimus
MGP_SPRETEiJ_G0023878	Rrp12	99	88.751	ENSVVUG00000023168	RRP12	99	88.751	Vulpes_vulpes
MGP_SPRETEiJ_G0023878	Rrp12	99	67.667	ENSXETG00000003430	rrp12	99	67.667	Xenopus_tropicalis
MGP_SPRETEiJ_G0023878	Rrp12	90	65.206	ENSXCOG00000012082	rrp12	97	64.957	Xiphophorus_couchianus
MGP_SPRETEiJ_G0023878	Rrp12	99	63.926	ENSXMAG00000013498	rrp12	99	63.713	Xiphophorus_maculatus