EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023941 (Gene tree)
Gene ID: -
Gene Symbol: Npm3
Alias: Nub1
Full Name: nucleoplasmin 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 1843 bases
Position: chr19:43314811-43316653
Accession: 894653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0050975	Nucleoplasmin	PF03066.15	2.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0050975	-	894	-	MGP_SPRETEiJ_P0050975	175 (aa)	-	-
MGP_SPRETEiJ_T0050976	-	689	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023941's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0023941	Npm3	59	38.462	MGP_SPRETEiJ_G0020384	Npm2	50	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023941	Npm3	94	82.143	ENSG00000107833	NPM3	100	85.393	Homo_sapiens
MGP_SPRETEiJ_G0023941	Npm3	65	50.862	ENSAPOG00000013083	npm3	70	50.435	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0023941	Npm3	85	63.158	ENSAMEG00000019414	-	90	65.132	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023941	Npm3	94	83.832	ENSAMEG00000017639	-	100	85.876	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023941	Npm3	79	47.518	ENSACIG00000022586	npm3	85	48.951	Amphilophus_citrinellus
MGP_SPRETEiJ_G0023941	Npm3	61	51.887	ENSAOCG00000009376	npm3	69	50.000	Amphiprion_ocellaris
MGP_SPRETEiJ_G0023941	Npm3	61	51.887	ENSAPEG00000015863	npm3	69	50.000	Amphiprion_percula
MGP_SPRETEiJ_G0023941	Npm3	65	49.123	ENSATEG00000022752	npm3	71	48.696	Anabas_testudineus
MGP_SPRETEiJ_G0023941	Npm3	57	74.000	ENSAPLG00000010935	NPM3	87	63.433	Anas_platyrhynchos
MGP_SPRETEiJ_G0023941	Npm3	74	56.923	ENSACAG00000011936	NPM3	74	57.364	Anolis_carolinensis
MGP_SPRETEiJ_G0023941	Npm3	100	84.270	ENSANAG00000027082	-	94	84.524	Aotus_nancymaae
MGP_SPRETEiJ_G0023941	Npm3	84	83.673	ENSANAG00000023832	-	64	83.824	Aotus_nancymaae
MGP_SPRETEiJ_G0023941	Npm3	94	70.238	ENSANAG00000023070	-	96	70.238	Aotus_nancymaae
MGP_SPRETEiJ_G0023941	Npm3	100	70.621	ENSANAG00000033290	-	94	70.659	Aotus_nancymaae
MGP_SPRETEiJ_G0023941	Npm3	61	51.887	ENSACLG00000007854	npm3	89	48.611	Astatotilapia_calliptera
MGP_SPRETEiJ_G0023941	Npm3	61	53.774	ENSAMXG00000039828	npm3	57	53.153	Astyanax_mexicanus
MGP_SPRETEiJ_G0023941	Npm3	97	85.380	ENSBTAG00000016335	NPM3	97	86.550	Bos_taurus
MGP_SPRETEiJ_G0023941	Npm3	100	82.584	ENSCJAG00000017650	NPM3	94	83.333	Callithrix_jacchus
MGP_SPRETEiJ_G0023941	Npm3	94	85.455	ENSCAFG00000009919	NPM3	87	86.286	Canis_familiaris
MGP_SPRETEiJ_G0023941	Npm3	94	85.455	ENSCAFG00020009185	NPM3	99	86.286	Canis_lupus_dingo
MGP_SPRETEiJ_G0023941	Npm3	99	57.803	ENSCHIG00000016052	-	92	57.669	Capra_hircus
MGP_SPRETEiJ_G0023941	Npm3	97	85.380	ENSCHIG00000024055	-	91	86.335	Capra_hircus
MGP_SPRETEiJ_G0023941	Npm3	94	45.732	ENSCAPG00000016606	NPM3	94	46.061	Cavia_aperea
MGP_SPRETEiJ_G0023941	Npm3	94	81.818	ENSCPOG00000006301	NPM3	95	81.818	Cavia_porcellus
MGP_SPRETEiJ_G0023941	Npm3	100	68.539	ENSCCAG00000029457	-	94	69.643	Cebus_capucinus
MGP_SPRETEiJ_G0023941	Npm3	94	82.738	ENSCCAG00000031043	-	100	84.270	Cebus_capucinus
MGP_SPRETEiJ_G0023941	Npm3	94	83.929	ENSCATG00000013755	NPM3	100	85.393	Cercocebus_atys
MGP_SPRETEiJ_G0023941	Npm3	94	83.929	ENSCSAG00000005509	NPM3	100	85.393	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023941	Npm3	94	61.818	ENSCPBG00000003817	NPM3	97	61.585	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023941	Npm3	94	82.036	ENSCANG00000020300	NPM3	100	84.746	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023941	Npm3	100	93.143	ENSCGRG00001013345	Npm3	100	93.143	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023941	Npm3	78	91.912	ENSCGRG00000015351	Npm3	85	90.580	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023941	Npm3	84	42.949	ENSCSEG00000007944	npm3	94	44.304	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0023941	Npm3	61	50.459	ENSCVAG00000003305	npm3	89	45.578	Cyprinodon_variegatus
MGP_SPRETEiJ_G0023941	Npm3	66	50.000	ENSDARG00000103594	npm3	72	49.153	Danio_rerio
MGP_SPRETEiJ_G0023941	Npm3	100	80.682	ENSDORG00000003491	Npm3	94	81.928	Dipodomys_ordii
MGP_SPRETEiJ_G0023941	Npm3	99	76.836	ENSETEG00000006307	NPM3	99	78.531	Echinops_telfairi
MGP_SPRETEiJ_G0023941	Npm3	94	82.036	ENSEASG00005008834	NPM3	100	84.746	Equus_asinus_asinus
MGP_SPRETEiJ_G0023941	Npm3	94	82.036	ENSECAG00000007524	NPM3	100	84.746	Equus_caballus
MGP_SPRETEiJ_G0023941	Npm3	64	51.786	ENSELUG00000021730	npm3	88	45.517	Esox_lucius
MGP_SPRETEiJ_G0023941	Npm3	100	86.932	ENSFCAG00000007178	NPM3	100	87.500	Felis_catus
MGP_SPRETEiJ_G0023941	Npm3	66	64.348	ENSFALG00000008586	NPM3	91	62.069	Ficedula_albicollis
MGP_SPRETEiJ_G0023941	Npm3	62	80.556	ENSFDAG00000016537	NPM3	100	80.556	Fukomys_damarensis
MGP_SPRETEiJ_G0023941	Npm3	70	48.361	ENSFHEG00000003983	npm3	68	50.467	Fundulus_heteroclitus
MGP_SPRETEiJ_G0023941	Npm3	61	49.057	ENSGMOG00000004317	npm3	74	47.826	Gadus_morhua
MGP_SPRETEiJ_G0023941	Npm3	60	68.571	ENSGALG00000032329	NPM3	95	60.000	Gallus_gallus
MGP_SPRETEiJ_G0023941	Npm3	67	49.153	ENSGAFG00000009135	npm3	94	44.079	Gambusia_affinis
MGP_SPRETEiJ_G0023941	Npm3	61	52.830	ENSGACG00000007294	npm3	62	52.830	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0023941	Npm3	77	65.926	ENSGAGG00000004081	NPM3	76	65.926	Gopherus_agassizii
MGP_SPRETEiJ_G0023941	Npm3	94	81.548	ENSGGOG00000027500	NPM3	100	84.831	Gorilla_gorilla
MGP_SPRETEiJ_G0023941	Npm3	61	50.943	ENSHBUG00000023704	npm3	89	48.951	Haplochromis_burtoni
MGP_SPRETEiJ_G0023941	Npm3	100	78.286	ENSHGLG00000019118	NPM3	100	77.714	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023941	Npm3	77	78.519	ENSHGLG00100010926	NPM3	100	77.778	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023941	Npm3	75	43.182	ENSHCOG00000019322	npm3	73	43.511	Hippocampus_comes
MGP_SPRETEiJ_G0023941	Npm3	77	46.667	ENSIPUG00000008204	npm3	74	50.862	Ictalurus_punctatus
MGP_SPRETEiJ_G0023941	Npm3	99	82.955	ENSSTOG00000022621	NPM3	94	83.735	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023941	Npm3	100	83.051	ENSJJAG00000018907	Npm3	100	82.486	Jaculus_jaculus
MGP_SPRETEiJ_G0023941	Npm3	63	51.818	ENSKMAG00000020800	npm3	68	50.000	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0023941	Npm3	61	52.830	ENSLBEG00000015651	npm3	86	49.640	Labrus_bergylta
MGP_SPRETEiJ_G0023941	Npm3	95	45.783	ENSLOCG00000000705	-	97	48.148	Lepisosteus_oculatus
MGP_SPRETEiJ_G0023941	Npm3	98	79.070	ENSLAFG00000023022	NPM3	95	84.431	Loxodonta_africana
MGP_SPRETEiJ_G0023941	Npm3	94	83.929	ENSMFAG00000041878	NPM3	100	85.393	Macaca_fascicularis
MGP_SPRETEiJ_G0023941	Npm3	94	83.333	ENSMMUG00000015774	NPM3	100	84.831	Macaca_mulatta
MGP_SPRETEiJ_G0023941	Npm3	94	83.929	ENSMNEG00000039999	NPM3	100	85.393	Macaca_nemestrina
MGP_SPRETEiJ_G0023941	Npm3	94	83.929	ENSMLEG00000038129	NPM3	100	85.393	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023941	Npm3	66	50.435	ENSMAMG00000002698	npm3	71	49.573	Mastacembelus_armatus
MGP_SPRETEiJ_G0023941	Npm3	81	48.951	ENSMZEG00005003091	npm3	89	48.951	Maylandia_zebra
MGP_SPRETEiJ_G0023941	Npm3	94	93.939	ENSMAUG00000015218	Npm3	94	93.939	Mesocricetus_auratus
MGP_SPRETEiJ_G0023941	Npm3	100	84.746	ENSMICG00000044119	NPM3	100	85.311	Microcebus_murinus
MGP_SPRETEiJ_G0023941	Npm3	94	90.854	ENSMOCG00000013601	Npm3	99	89.080	Microtus_ochrogaster
MGP_SPRETEiJ_G0023941	Npm3	61	51.887	ENSMMOG00000010681	npm3	74	47.154	Mola_mola
MGP_SPRETEiJ_G0023941	Npm3	98	68.000	ENSMODG00000011689	NPM3	94	69.461	Monodelphis_domestica
MGP_SPRETEiJ_G0023941	Npm3	67	46.218	ENSMALG00000016787	npm3	72	45.902	Monopterus_albus
MGP_SPRETEiJ_G0023941	Npm3	100	98.286	MGP_CAROLIEiJ_G0023020	Npm3	100	98.286	Mus_caroli
MGP_SPRETEiJ_G0023941	Npm3	100	98.857	ENSMUSG00000056209	Npm3	100	98.857	Mus_musculus
MGP_SPRETEiJ_G0023941	Npm3	100	97.714	MGP_PahariEiJ_G0014510	Npm3	100	97.714	Mus_pahari
MGP_SPRETEiJ_G0023941	Npm3	94	83.234	ENSMPUG00000016894	NPM3	100	85.311	Mustela_putorius_furo
MGP_SPRETEiJ_G0023941	Npm3	97	80.814	ENSMLUG00000004961	NPM3	92	82.209	Myotis_lucifugus
MGP_SPRETEiJ_G0023941	Npm3	99	85.714	ENSNGAG00000022833	-	99	86.286	Nannospalax_galili
MGP_SPRETEiJ_G0023941	Npm3	99	79.885	ENSNGAG00000000155	-	99	78.161	Nannospalax_galili
MGP_SPRETEiJ_G0023941	Npm3	94	81.548	ENSNLEG00000018637	-	100	83.146	Nomascus_leucogenys
MGP_SPRETEiJ_G0023941	Npm3	94	83.929	ENSNLEG00000029281	-	100	85.393	Nomascus_leucogenys
MGP_SPRETEiJ_G0023941	Npm3	57	66.667	ENSMEUG00000004931	-	100	66.667	Notamacropus_eugenii
MGP_SPRETEiJ_G0023941	Npm3	78	75.912	ENSMEUG00000003465	-	93	77.519	Notamacropus_eugenii
MGP_SPRETEiJ_G0023941	Npm3	57	70.707	ENSMEUG00000002619	-	100	70.707	Notamacropus_eugenii
MGP_SPRETEiJ_G0023941	Npm3	93	80.606	ENSOPRG00000009229	NPM3	93	80.000	Ochotona_princeps
MGP_SPRETEiJ_G0023941	Npm3	97	78.235	ENSODEG00000006704	NPM3	96	78.182	Octodon_degus
MGP_SPRETEiJ_G0023941	Npm3	79	49.650	ENSONIG00000009513	npm3	97	43.558	Oreochromis_niloticus
MGP_SPRETEiJ_G0023941	Npm3	94	85.542	ENSOCUG00000016819	NPM3	94	86.747	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023941	Npm3	61	51.887	ENSORLG00000008492	npm3	89	49.645	Oryzias_latipes
MGP_SPRETEiJ_G0023941	Npm3	61	51.887	ENSORLG00020002450	npm3	89	49.645	Oryzias_latipes_hni
MGP_SPRETEiJ_G0023941	Npm3	79	49.645	ENSORLG00015006856	npm3	89	49.645	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0023941	Npm3	61	50.943	ENSOMEG00000002666	npm3	69	49.107	Oryzias_melastigma
MGP_SPRETEiJ_G0023941	Npm3	100	84.181	ENSOGAG00000010001	NPM3	94	84.431	Otolemur_garnettii
MGP_SPRETEiJ_G0023941	Npm3	97	84.795	ENSOARG00000016916	NPM3	91	86.335	Ovis_aries
MGP_SPRETEiJ_G0023941	Npm3	94	82.143	ENSPPAG00000040517	NPM3	100	85.393	Pan_paniscus
MGP_SPRETEiJ_G0023941	Npm3	100	86.932	ENSPPRG00000012611	-	100	87.500	Panthera_pardus
MGP_SPRETEiJ_G0023941	Npm3	100	87.500	ENSPTIG00000005390	NPM3	100	88.068	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023941	Npm3	94	82.143	ENSPTRG00000002875	NPM3	100	85.393	Pan_troglodytes
MGP_SPRETEiJ_G0023941	Npm3	94	83.929	ENSPANG00000021046	NPM3	100	85.393	Papio_anubis
MGP_SPRETEiJ_G0023941	Npm3	61	41.509	ENSPKIG00000007609	npm3	57	41.509	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0023941	Npm3	61	55.140	ENSPMGG00000020204	npm3	70	52.632	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0023941	Npm3	94	90.361	ENSPEMG00000007731	Npm3	100	91.477	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023941	Npm3	61	52.336	ENSPFOG00000014692	npm3	69	51.786	Poecilia_formosa
MGP_SPRETEiJ_G0023941	Npm3	61	52.336	ENSPLAG00000009956	npm3	69	51.786	Poecilia_latipinna
MGP_SPRETEiJ_G0023941	Npm3	58	52.475	ENSPMEG00000011795	npm3	71	51.887	Poecilia_mexicana
MGP_SPRETEiJ_G0023941	Npm3	61	52.336	ENSPREG00000020765	npm3	94	44.444	Poecilia_reticulata
MGP_SPRETEiJ_G0023941	Npm3	94	83.529	ENSPPYG00000002589	NPM3	87	84.444	Pongo_abelii
MGP_SPRETEiJ_G0023941	Npm3	100	83.616	ENSPCOG00000014704	NPM3	94	84.431	Propithecus_coquereli
MGP_SPRETEiJ_G0023941	Npm3	94	81.437	ENSPVAG00000004038	NPM3	100	83.616	Pteropus_vampyrus
MGP_SPRETEiJ_G0023941	Npm3	81	48.951	ENSPNYG00000009300	npm3	89	48.951	Pundamilia_nyererei
MGP_SPRETEiJ_G0023941	Npm3	78	49.265	ENSPNAG00000014779	npm3	96	47.468	Pygocentrus_nattereri
MGP_SPRETEiJ_G0023941	Npm3	100	93.714	ENSRNOG00000017622	Npm3	100	92.571	Rattus_norvegicus
MGP_SPRETEiJ_G0023941	Npm3	91	72.222	ENSRBIG00000042048	-	90	80.420	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023941	Npm3	100	82.486	ENSRBIG00000039086	-	100	84.746	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023941	Npm3	100	82.486	ENSRROG00000029912	NPM3	100	84.746	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023941	Npm3	95	83.529	ENSSBOG00000027661	NPM3	94	84.375	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023941	Npm3	92	66.667	ENSSHAG00000008567	NPM3	94	66.071	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023941	Npm3	75	43.511	ENSSFOG00015013651	npm3	97	39.506	Scleropages_formosus
MGP_SPRETEiJ_G0023941	Npm3	65	48.246	ENSSMAG00000003907	npm3	91	45.517	Scophthalmus_maximus
MGP_SPRETEiJ_G0023941	Npm3	65	51.754	ENSSDUG00000022843	npm3	72	50.862	Seriola_dumerili
MGP_SPRETEiJ_G0023941	Npm3	65	51.754	ENSSLDG00000002811	npm3	72	50.862	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0023941	Npm3	60	75.000	ENSSPUG00000011875	NPM3	68	75.000	Sphenodon_punctatus
MGP_SPRETEiJ_G0023941	Npm3	64	50.000	ENSSPAG00000002553	npm3	73	48.305	Stegastes_partitus
MGP_SPRETEiJ_G0023941	Npm3	99	80.571	ENSSSCG00000010568	NPM3	94	83.030	Sus_scrofa
MGP_SPRETEiJ_G0023941	Npm3	60	69.524	ENSTGUG00000009948	NPM3	80	69.524	Taeniopygia_guttata
MGP_SPRETEiJ_G0023941	Npm3	83	46.575	ENSTRUG00000011661	npm3	74	50.427	Takifugu_rubripes
MGP_SPRETEiJ_G0023941	Npm3	67	49.573	ENSTNIG00000016518	npm3	67	49.573	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0023941	Npm3	94	84.431	ENSUAMG00000024072	NPM3	73	86.441	Ursus_americanus
MGP_SPRETEiJ_G0023941	Npm3	94	84.431	ENSUMAG00000023016	NPM3	73	86.441	Ursus_maritimus
MGP_SPRETEiJ_G0023941	Npm3	100	85.795	ENSVPAG00000003120	NPM3	100	88.068	Vicugna_pacos
MGP_SPRETEiJ_G0023941	Npm3	94	85.455	ENSVVUG00000000945	NPM3	87	86.286	Vulpes_vulpes
MGP_SPRETEiJ_G0023941	Npm3	81	44.706	ENSXETG00000014472	npm3	68	55.932	Xenopus_tropicalis
MGP_SPRETEiJ_G0023941	Npm3	78	45.255	ENSXCOG00000012121	npm3	72	49.167	Xiphophorus_couchianus
MGP_SPRETEiJ_G0023941	Npm3	64	51.786	ENSXMAG00000013473	npm3	67	51.786	Xiphophorus_maculatus