EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023947 (Gene tree)
Gene ID: -
Gene Symbol: Pprc1
Alias: -
Full Name: peroxisome proliferative activated receptor%2C gamma%2C coactivator-related 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 33570 bases
Position: chr19:43625919-43659488
Accession: 2385096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0051001	RRM_1	PF00076.22	6.3e-08	1	1
MGP_SPRETEiJ_P0050999	RRM_1	PF00076.22	6.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0051009	-	688	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0051008	-	290	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0051007	-	3715	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0051006	-	308	-	MGP_SPRETEiJ_P0051006	43 (aa)	-	UPI00015AA175
MGP_SPRETEiJ_T0051005	-	564	-	MGP_SPRETEiJ_P0051005	120 (aa)	-	-
MGP_SPRETEiJ_T0051004	-	543	-	MGP_SPRETEiJ_P0051004	145 (aa)	-	UPI00015AA177
MGP_SPRETEiJ_T0051003	-	386	-	MGP_SPRETEiJ_P0051003	93 (aa)	-	UPI00015AA176
MGP_SPRETEiJ_T0051002	-	385	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0051001	-	5188	-	MGP_SPRETEiJ_P0051001	1641 (aa)	-	-
MGP_SPRETEiJ_T0051000	-	3947	-	MGP_SPRETEiJ_P0051000	1202 (aa)	-	-
MGP_SPRETEiJ_T0050998	-	405	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0050999	-	5229	-	MGP_SPRETEiJ_P0050999	1639 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023947's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSG00000148840	PPRC1	97	83.604	Homo_sapiens
MGP_SPRETEiJ_G0023947	Pprc1	100	73.377	ENSAMEG00000017685	PPRC1	100	73.973	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSBTAG00000007427	PPRC1	96	98.592	Bos_taurus
MGP_SPRETEiJ_G0023947	Pprc1	100	73.084	ENSCAFG00000010040	PPRC1	100	72.711	Canis_familiaris
MGP_SPRETEiJ_G0023947	Pprc1	79	98.621	ENSCAFG00020010030	PPRC1	99	98.592	Canis_lupus_dingo
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSCHIG00000011471	PPRC1	96	98.592	Capra_hircus
MGP_SPRETEiJ_G0023947	Pprc1	81	98.639	ENSCPOG00000032149	PPRC1	96	99.296	Cavia_porcellus
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSCCAG00000014910	PPRC1	100	82.938	Cebus_capucinus
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSCATG00000029634	PPRC1	71	98.592	Cercocebus_atys
MGP_SPRETEiJ_G0023947	Pprc1	81	99.296	ENSCLAG00000001364	PPRC1	96	99.296	Chinchilla_lanigera
MGP_SPRETEiJ_G0023947	Pprc1	75	69.620	ENSCHOG00000006574	PPRC1	99	70.095	Choloepus_hoffmanni
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSCANG00000037336	PPRC1	100	82.938	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023947	Pprc1	100	81.068	ENSCGRG00001011726	Pprc1	100	79.672	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023947	Pprc1	95	81.940	ENSCGRG00000012760	Pprc1	100	80.472	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023947	Pprc1	100	72.340	ENSDNOG00000040730	PPRC1	100	71.792	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023947	Pprc1	100	74.595	ENSDORG00000001046	Pprc1	100	74.174	Dipodomys_ordii
MGP_SPRETEiJ_G0023947	Pprc1	100	72.889	ENSEASG00005007583	PPRC1	100	71.446	Equus_asinus_asinus
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSECAG00000009482	PPRC1	96	98.592	Equus_caballus
MGP_SPRETEiJ_G0023947	Pprc1	72	77.285	ENSEEUG00000014216	PPRC1	72	77.424	Erinaceus_europaeus
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSFCAG00000001238	PPRC1	71	98.592	Felis_catus
MGP_SPRETEiJ_G0023947	Pprc1	95	72.802	ENSFDAG00000011496	PPRC1	100	72.470	Fukomys_damarensis
MGP_SPRETEiJ_G0023947	Pprc1	100	72.494	ENSLAFG00000014232	PPRC1	100	72.548	Loxodonta_africana
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSMFAG00000038589	PPRC1	100	83.937	Macaca_fascicularis
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSMMUG00000001186	PPRC1	71	98.592	Macaca_mulatta
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSMNEG00000031603	PPRC1	71	98.592	Macaca_nemestrina
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSMLEG00000035092	PPRC1	71	98.592	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023947	Pprc1	88	79.808	ENSMAUG00000016674	Pprc1	100	81.171	Mesocricetus_auratus
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSMICG00000011794	PPRC1	71	98.592	Microcebus_murinus
MGP_SPRETEiJ_G0023947	Pprc1	100	93.864	MGP_CAROLIEiJ_G0023026	Pprc1	100	94.411	Mus_caroli
MGP_SPRETEiJ_G0023947	Pprc1	100	98.118	ENSMUSG00000055491	Pprc1	100	98.118	Mus_musculus
MGP_SPRETEiJ_G0023947	Pprc1	100	90.723	MGP_PahariEiJ_G0014516	Pprc1	100	90.904	Mus_pahari
MGP_SPRETEiJ_G0023947	Pprc1	100	79.335	ENSNGAG00000016516	Pprc1	100	78.817	Nannospalax_galili
MGP_SPRETEiJ_G0023947	Pprc1	50	91.200	ENSMEUG00000013795	-	52	91.200	Notamacropus_eugenii
MGP_SPRETEiJ_G0023947	Pprc1	91	81.818	ENSOPRG00000009346	PPRC1	91	81.818	Ochotona_princeps
MGP_SPRETEiJ_G0023947	Pprc1	100	72.592	ENSOCUG00000000510	PPRC1	100	73.068	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023947	Pprc1	97	71.534	ENSOARG00000017509	PPRC1	82	71.946	Ovis_aries
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSPPRG00000004274	PPRC1	71	98.592	Panthera_pardus
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSPTIG00000013709	PPRC1	71	98.592	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSPANG00000021042	PPRC1	71	98.592	Papio_anubis
MGP_SPRETEiJ_G0023947	Pprc1	82	76.053	ENSPCAG00000008277	PPRC1	94	71.400	Procavia_capensis
MGP_SPRETEiJ_G0023947	Pprc1	81	98.582	ENSPCOG00000025917	PPRC1	96	97.887	Propithecus_coquereli
MGP_SPRETEiJ_G0023947	Pprc1	100	85.541	ENSRNOG00000018561	Pprc1	100	86.087	Rattus_norvegicus
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSRBIG00000027711	PPRC1	100	82.780	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSRROG00000044599	PPRC1	71	98.592	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023947	Pprc1	76	99.291	ENSUAMG00000028058	PPRC1	96	98.592	Ursus_americanus
MGP_SPRETEiJ_G0023947	Pprc1	95	99.291	ENSUMAG00000023041	PPRC1	96	98.592	Ursus_maritimus
MGP_SPRETEiJ_G0023947	Pprc1	81	99.291	ENSVVUG00000002566	PPRC1	96	98.592	Vulpes_vulpes