EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023948 (Gene tree)
Gene ID: -
Gene Symbol: Nolc1
Alias: 3230402K17Rik|NOPP140|P130
Full Name: nucleolar and coiled-body phosphoprotein 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 10370 bases
Position: chr19:43662343-43672712
Accession: 1918019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0051010	SRP40_C	PF05022.12	2.6e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0051010	-	3625	-	MGP_SPRETEiJ_P0051010	700 (aa)	-	-
MGP_SPRETEiJ_T0051011	-	3467	-	MGP_SPRETEiJ_P0051011	699 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023948's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023948	Nolc1	100	68.575	ENSG00000166197	NOLC1	93	83.721	Homo_sapiens
MGP_SPRETEiJ_G0023948	Nolc1	100	67.684	ENSBTAG00000007435	NOLC1	65	66.738	Bos_taurus
MGP_SPRETEiJ_G0023948	Nolc1	100	68.407	ENSCJAG00000017832	NOLC1	65	60.300	Callithrix_jacchus
MGP_SPRETEiJ_G0023948	Nolc1	100	69.134	ENSCCAG00000031293	NOLC1	60	65.734	Cebus_capucinus
MGP_SPRETEiJ_G0023948	Nolc1	100	68.802	ENSCATG00000020949	NOLC1	65	65.368	Cercocebus_atys
MGP_SPRETEiJ_G0023948	Nolc1	100	66.166	ENSCSAG00000005465	NOLC1	65	61.734	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023948	Nolc1	100	90.984	ENSDNOG00000025256	NOLC1	57	90.984	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023948	Nolc1	100	72.106	ENSDORG00000001056	Nolc1	61	67.206	Dipodomys_ordii
MGP_SPRETEiJ_G0023948	Nolc1	81	69.725	ENSETEG00000019260	NOLC1	55	56.438	Echinops_telfairi
MGP_SPRETEiJ_G0023948	Nolc1	100	72.238	ENSEASG00005007519	NOLC1	81	89.744	Equus_asinus_asinus
MGP_SPRETEiJ_G0023948	Nolc1	82	66.942	ENSEEUG00000003212	NOLC1	59	67.769	Erinaceus_europaeus
MGP_SPRETEiJ_G0023948	Nolc1	100	68.340	ENSMFAG00000044654	NOLC1	65	65.510	Macaca_fascicularis
MGP_SPRETEiJ_G0023948	Nolc1	100	68.112	ENSMMUG00000001183	NOLC1	65	66.091	Macaca_mulatta
MGP_SPRETEiJ_G0023948	Nolc1	100	67.813	ENSMLEG00000040773	NOLC1	64	63.341	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023948	Nolc1	100	76.338	ENSMOCG00000015232	Nolc1	66	76.293	Microtus_ochrogaster
MGP_SPRETEiJ_G0023948	Nolc1	100	88.039	MGP_CAROLIEiJ_G0023027	Nolc1	100	87.604	Mus_caroli
MGP_SPRETEiJ_G0023948	Nolc1	100	98.009	ENSMUSG00000015176	Nolc1	100	98.009	Mus_musculus
MGP_SPRETEiJ_G0023948	Nolc1	100	83.639	MGP_PahariEiJ_G0014517	Nolc1	100	83.498	Mus_pahari
MGP_SPRETEiJ_G0023948	Nolc1	100	71.893	ENSNGAG00000024139	Nolc1	61	71.889	Nannospalax_galili
MGP_SPRETEiJ_G0023948	Nolc1	100	67.956	ENSPPRG00000003072	NOLC1	65	68.499	Panthera_pardus
MGP_SPRETEiJ_G0023948	Nolc1	100	68.663	ENSPANG00000021014	NOLC1	64	62.338	Papio_anubis
MGP_SPRETEiJ_G0023948	Nolc1	100	66.295	ENSPPYG00000002595	NOLC1	62	63.420	Pongo_abelii
MGP_SPRETEiJ_G0023948	Nolc1	100	82.378	ENSRNOG00000018704	Nolc1	65	83.547	Rattus_norvegicus
MGP_SPRETEiJ_G0023948	Nolc1	100	63.515	ENSRBIG00000032216	NOLC1	63	63.830	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023948	Nolc1	100	68.296	ENSRROG00000038056	NOLC1	63	64.043	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023948	Nolc1	100	66.300	ENSSARG00000004111	NOLC1	64	68.094	Sorex_araneus