EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023971 (Gene tree)
Gene ID: -
Gene Symbol: Pdcd11
Alias: 1110021I22Rik|ALG-4
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 49031 bases
Position: chr19:44754841-44803871
Accession: 1341788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0051076	Suf	PF05843.14	3.7e-09	1	1
MGP_SPRETEiJ_P0051076	S1	PF00575.23	7.6e-60	1	4
MGP_SPRETEiJ_P0051076	S1	PF00575.23	7.6e-60	2	4
MGP_SPRETEiJ_P0051076	S1	PF00575.23	7.6e-60	3	4
MGP_SPRETEiJ_P0051076	S1	PF00575.23	7.6e-60	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0051076	-	6034	-	MGP_SPRETEiJ_P0051076	1860 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023971's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.585	ENSG00000148843	PDCD11	100	80.532	Homo_sapiens
MGP_SPRETEiJ_G0023971	Pdcd11	99	44.043	ENSAPOG00000015629	pdcd11	99	43.763	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0023971	Pdcd11	99	77.978	ENSAMEG00000017935	PDCD11	99	78.166	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023971	Pdcd11	99	44.036	ENSAOCG00000015287	pdcd11	99	43.840	Amphiprion_ocellaris
MGP_SPRETEiJ_G0023971	Pdcd11	53	43.143	ENSAPEG00000020240	pdcd11	96	43.173	Amphiprion_percula
MGP_SPRETEiJ_G0023971	Pdcd11	99	43.246	ENSATEG00000021043	pdcd11	99	43.390	Anabas_testudineus
MGP_SPRETEiJ_G0023971	Pdcd11	99	54.063	ENSAPLG00000010301	PDCD11	99	54.468	Anas_platyrhynchos
MGP_SPRETEiJ_G0023971	Pdcd11	99	53.780	ENSACAG00000004796	PDCD11	99	53.405	Anolis_carolinensis
MGP_SPRETEiJ_G0023971	Pdcd11	99	79.893	ENSANAG00000034576	PDCD11	99	79.573	Aotus_nancymaae
MGP_SPRETEiJ_G0023971	Pdcd11	90	65.580	ENSACLG00000018236	pdcd11	98	59.544	Astatotilapia_calliptera
MGP_SPRETEiJ_G0023971	Pdcd11	99	40.591	ENSAMXG00000005458	pdcd11	100	40.412	Astyanax_mexicanus
MGP_SPRETEiJ_G0023971	Pdcd11	100	76.193	ENSBTAG00000009715	PDCD11	100	75.928	Bos_taurus
MGP_SPRETEiJ_G0023971	Pdcd11	99	79.040	ENSCJAG00000018257	PDCD11	99	79.307	Callithrix_jacchus
MGP_SPRETEiJ_G0023971	Pdcd11	99	77.937	ENSCAFG00000010411	PDCD11	100	78.363	Canis_familiaris
MGP_SPRETEiJ_G0023971	Pdcd11	99	79.001	ENSCAFG00020010369	PDCD11	100	79.012	Canis_lupus_dingo
MGP_SPRETEiJ_G0023971	Pdcd11	99	76.127	ENSCHIG00000025218	PDCD11	100	75.756	Capra_hircus
MGP_SPRETEiJ_G0023971	Pdcd11	98	72.877	ENSTSYG00000033423	PDCD11	99	72.697	Carlito_syrichta
MGP_SPRETEiJ_G0023971	Pdcd11	91	68.592	ENSCAPG00000005386	PDCD11	99	68.462	Cavia_aperea
MGP_SPRETEiJ_G0023971	Pdcd11	100	76.747	ENSCPOG00000010957	PDCD11	99	77.965	Cavia_porcellus
MGP_SPRETEiJ_G0023971	Pdcd11	99	79.680	ENSCCAG00000018950	PDCD11	99	79.680	Cebus_capucinus
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.818	ENSCATG00000044331	PDCD11	100	80.765	Cercocebus_atys
MGP_SPRETEiJ_G0023971	Pdcd11	100	77.926	ENSCLAG00000001029	PDCD11	100	77.457	Chinchilla_lanigera
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.691	ENSCSAG00000005346	PDCD11	100	80.638	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023971	Pdcd11	84	96.124	ENSCHOG00000004796	PDCD11	88	96.124	Choloepus_hoffmanni
MGP_SPRETEiJ_G0023971	Pdcd11	91	73.143	ENSCPBG00000024487	PDCD11	99	74.644	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.213	ENSCANG00000043300	PDCD11	100	80.426	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023971	Pdcd11	100	86.050	ENSCGRG00001006458	Pdcd11	100	86.050	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023971	Pdcd11	100	85.844	ENSCGRG00000003583	Pdcd11	100	85.844	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023971	Pdcd11	97	43.257	ENSCSEG00000010739	pdcd11	99	43.500	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0023971	Pdcd11	90	60.997	ENSCVAG00000018903	pdcd11	99	47.161	Cyprinodon_variegatus
MGP_SPRETEiJ_G0023971	Pdcd11	99	42.285	ENSDARG00000052480	pdcd11	99	42.279	Danio_rerio
MGP_SPRETEiJ_G0023971	Pdcd11	100	76.882	ENSDNOG00000013838	PDCD11	100	76.988	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023971	Pdcd11	100	79.689	ENSDORG00000010420	Pdcd11	100	79.850	Dipodomys_ordii
MGP_SPRETEiJ_G0023971	Pdcd11	60	39.812	FBgn0039182	CG5728	74	40.636	Drosophila_melanogaster
MGP_SPRETEiJ_G0023971	Pdcd11	95	66.910	ENSETEG00000000813	PDCD11	100	66.573	Echinops_telfairi
MGP_SPRETEiJ_G0023971	Pdcd11	67	51.839	ENSEBUG00000002358	-	92	52.941	Eptatretus_burgeri
MGP_SPRETEiJ_G0023971	Pdcd11	96	79.556	ENSEASG00005015159	PDCD11	100	79.556	Equus_asinus_asinus
MGP_SPRETEiJ_G0023971	Pdcd11	100	79.459	ENSECAG00000020507	PDCD11	100	79.140	Equus_caballus
MGP_SPRETEiJ_G0023971	Pdcd11	98	82.000	ENSEEUG00000009245	PDCD11	91	82.000	Erinaceus_europaeus
MGP_SPRETEiJ_G0023971	Pdcd11	99	44.385	ENSELUG00000004211	pdcd11	99	44.036	Esox_lucius
MGP_SPRETEiJ_G0023971	Pdcd11	99	78.314	ENSFCAG00000002384	PDCD11	99	78.545	Felis_catus
MGP_SPRETEiJ_G0023971	Pdcd11	99	55.115	ENSFALG00000008775	PDCD11	99	55.110	Ficedula_albicollis
MGP_SPRETEiJ_G0023971	Pdcd11	100	76.686	ENSFDAG00000009532	PDCD11	100	76.474	Fukomys_damarensis
MGP_SPRETEiJ_G0023971	Pdcd11	94	65.878	ENSFHEG00000022997	pdcd11	99	66.901	Fundulus_heteroclitus
MGP_SPRETEiJ_G0023971	Pdcd11	92	43.650	ENSGMOG00000004186	pdcd11	94	43.527	Gadus_morhua
MGP_SPRETEiJ_G0023971	Pdcd11	76	53.024	ENSGALG00000008265	PDCD11	99	52.531	Gallus_gallus
MGP_SPRETEiJ_G0023971	Pdcd11	93	49.453	ENSGAFG00000012806	pdcd11	99	49.088	Gambusia_affinis
MGP_SPRETEiJ_G0023971	Pdcd11	99	43.370	ENSGACG00000018233	pdcd11	97	58.530	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0023971	Pdcd11	95	58.361	ENSGAGG00000024314	PDCD11	99	58.249	Gopherus_agassizii
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.266	ENSGGOG00000011621	PDCD11	100	80.213	Gorilla_gorilla
MGP_SPRETEiJ_G0023971	Pdcd11	99	44.177	ENSHBUG00000020226	pdcd11	99	44.094	Haplochromis_burtoni
MGP_SPRETEiJ_G0023971	Pdcd11	100	77.038	ENSHGLG00000001462	PDCD11	100	77.091	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023971	Pdcd11	100	76.345	ENSHGLG00100018779	PDCD11	100	76.399	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023971	Pdcd11	99	42.560	ENSHCOG00000016006	pdcd11	99	42.357	Hippocampus_comes
MGP_SPRETEiJ_G0023971	Pdcd11	63	39.728	ENSIPUG00000015102	pdcd11	99	41.684	Ictalurus_punctatus
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.128	ENSSTOG00000014553	PDCD11	100	80.075	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023971	Pdcd11	100	81.029	ENSJJAG00000015523	Pdcd11	100	81.029	Jaculus_jaculus
MGP_SPRETEiJ_G0023971	Pdcd11	99	48.318	ENSLOCG00000011818	pdcd11	99	48.000	Lepisosteus_oculatus
MGP_SPRETEiJ_G0023971	Pdcd11	100	77.414	ENSLAFG00000008398	PDCD11	100	77.361	Loxodonta_africana
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.585	ENSMFAG00000044058	PDCD11	100	80.798	Macaca_fascicularis
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.532	ENSMMUG00000007058	PDCD11	100	80.745	Macaca_mulatta
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.532	ENSMNEG00000040726	PDCD11	99	80.798	Macaca_nemestrina
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.011	ENSMLEG00000040978	PDCD11	100	79.660	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023971	Pdcd11	99	43.216	ENSMAMG00000009572	pdcd11	99	43.353	Mastacembelus_armatus
MGP_SPRETEiJ_G0023971	Pdcd11	99	44.017	ENSMZEG00005008949	pdcd11	99	43.910	Maylandia_zebra
MGP_SPRETEiJ_G0023971	Pdcd11	99	54.421	ENSMGAG00000010482	PDCD11	99	54.622	Meleagris_gallopavo
MGP_SPRETEiJ_G0023971	Pdcd11	89	87.419	ENSMAUG00000014924	Pdcd11	97	87.310	Mesocricetus_auratus
MGP_SPRETEiJ_G0023971	Pdcd11	100	79.434	ENSMICG00000012421	PDCD11	100	79.380	Microcebus_murinus
MGP_SPRETEiJ_G0023971	Pdcd11	100	84.705	ENSMOCG00000021792	Pdcd11	100	84.705	Microtus_ochrogaster
MGP_SPRETEiJ_G0023971	Pdcd11	99	40.159	ENSMMOG00000007572	pdcd11	97	43.797	Mola_mola
MGP_SPRETEiJ_G0023971	Pdcd11	99	59.863	ENSMODG00000011077	PDCD11	99	60.265	Monodelphis_domestica
MGP_SPRETEiJ_G0023971	Pdcd11	99	40.819	ENSMALG00000003859	pdcd11	98	43.011	Monopterus_albus
MGP_SPRETEiJ_G0023971	Pdcd11	100	97.312	MGP_CAROLIEiJ_G0023050	Pdcd11	100	97.312	Mus_caroli
MGP_SPRETEiJ_G0023971	Pdcd11	100	98.818	ENSMUSG00000025047	Pdcd11	100	98.818	Mus_musculus
MGP_SPRETEiJ_G0023971	Pdcd11	100	94.011	MGP_PahariEiJ_G0014540	Pdcd11	100	94.492	Mus_pahari
MGP_SPRETEiJ_G0023971	Pdcd11	99	77.459	ENSMPUG00000016829	PDCD11	100	78.108	Mustela_putorius_furo
MGP_SPRETEiJ_G0023971	Pdcd11	100	79.438	ENSMLUG00000004997	PDCD11	100	79.619	Myotis_lucifugus
MGP_SPRETEiJ_G0023971	Pdcd11	100	82.394	ENSNGAG00000018143	Pdcd11	100	82.660	Nannospalax_galili
MGP_SPRETEiJ_G0023971	Pdcd11	85	57.313	ENSNBRG00000021596	pdcd11	98	55.493	Neolamprologus_brichardi
MGP_SPRETEiJ_G0023971	Pdcd11	100	77.713	ENSNLEG00000026700	PDCD11	100	77.660	Nomascus_leucogenys
MGP_SPRETEiJ_G0023971	Pdcd11	70	79.039	ENSMEUG00000013719	-	71	79.039	Notamacropus_eugenii
MGP_SPRETEiJ_G0023971	Pdcd11	100	74.548	ENSOPRG00000010593	PDCD11	100	74.495	Ochotona_princeps
MGP_SPRETEiJ_G0023971	Pdcd11	100	75.716	ENSODEG00000008079	PDCD11	99	75.769	Octodon_degus
MGP_SPRETEiJ_G0023971	Pdcd11	99	44.041	ENSONIG00000018835	pdcd11	99	44.148	Oreochromis_niloticus
MGP_SPRETEiJ_G0023971	Pdcd11	99	58.877	ENSOANG00000001636	-	99	58.694	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023971	Pdcd11	100	78.621	ENSOCUG00000006312	PDCD11	100	78.738	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023971	Pdcd11	99	43.139	ENSORLG00020003642	pdcd11	99	43.413	Oryzias_latipes_hni
MGP_SPRETEiJ_G0023971	Pdcd11	99	43.184	ENSORLG00015001618	pdcd11	99	43.457	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0023971	Pdcd11	73	43.102	ENSOMEG00000010904	pdcd11	98	43.067	Oryzias_melastigma
MGP_SPRETEiJ_G0023971	Pdcd11	100	78.014	ENSOGAG00000008683	PDCD11	100	77.884	Otolemur_garnettii
MGP_SPRETEiJ_G0023971	Pdcd11	99	75.968	ENSOARG00000003719	PDCD11	100	75.650	Ovis_aries
MGP_SPRETEiJ_G0023971	Pdcd11	100	77.630	ENSPPAG00000024593	PDCD11	100	78.510	Pan_paniscus
MGP_SPRETEiJ_G0023971	Pdcd11	99	78.208	ENSPPRG00000015133	PDCD11	99	78.439	Panthera_pardus
MGP_SPRETEiJ_G0023971	Pdcd11	99	78.219	ENSPTIG00000011433	PDCD11	99	78.450	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.319	ENSPTRG00000002911	PDCD11	100	80.266	Pan_troglodytes
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.745	ENSPANG00000020959	PDCD11	100	80.691	Papio_anubis
MGP_SPRETEiJ_G0023971	Pdcd11	99	45.440	ENSPKIG00000000973	pdcd11	99	45.479	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0023971	Pdcd11	78	55.456	ENSPSIG00000005102	PDCD11	95	55.182	Pelodiscus_sinensis
MGP_SPRETEiJ_G0023971	Pdcd11	70	47.129	ENSPMGG00000007289	pdcd11	92	47.233	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0023971	Pdcd11	100	84.636	ENSPEMG00000010315	Pdcd11	100	85.380	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023971	Pdcd11	99	41.689	ENSPMAG00000003098	pdcd11	99	41.675	Petromyzon_marinus
MGP_SPRETEiJ_G0023971	Pdcd11	100	64.263	ENSPCIG00000001118	PDCD11	100	64.259	Phascolarctos_cinereus
MGP_SPRETEiJ_G0023971	Pdcd11	99	43.606	ENSPFOG00000006012	pdcd11	99	43.406	Poecilia_formosa
MGP_SPRETEiJ_G0023971	Pdcd11	96	48.204	ENSPLAG00000014494	pdcd11	99	48.649	Poecilia_latipinna
MGP_SPRETEiJ_G0023971	Pdcd11	91	53.797	ENSPMEG00000018177	pdcd11	98	54.852	Poecilia_mexicana
MGP_SPRETEiJ_G0023971	Pdcd11	99	43.660	ENSPREG00000000475	pdcd11	99	43.673	Poecilia_reticulata
MGP_SPRETEiJ_G0023971	Pdcd11	100	76.357	ENSPPYG00000002621	PDCD11	100	76.426	Pongo_abelii
MGP_SPRETEiJ_G0023971	Pdcd11	73	71.788	ENSPCAG00000011663	PDCD11	75	71.788	Procavia_capensis
MGP_SPRETEiJ_G0023971	Pdcd11	92	76.640	ENSPCOG00000023327	PDCD11	99	76.371	Propithecus_coquereli
MGP_SPRETEiJ_G0023971	Pdcd11	100	77.413	ENSPVAG00000004176	PDCD11	100	77.413	Pteropus_vampyrus
MGP_SPRETEiJ_G0023971	Pdcd11	99	44.177	ENSPNYG00000003979	pdcd11	99	44.148	Pundamilia_nyererei
MGP_SPRETEiJ_G0023971	Pdcd11	95	44.438	ENSPNAG00000017225	pdcd11	99	44.302	Pygocentrus_nattereri
MGP_SPRETEiJ_G0023971	Pdcd11	100	90.208	ENSRNOG00000020304	Pdcd11	99	90.261	Rattus_norvegicus
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.266	ENSRBIG00000011889	PDCD11	100	80.479	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023971	Pdcd11	100	80.319	ENSRROG00000030483	PDCD11	100	80.532	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023971	Pdcd11	85	47.253	YMR229C	-	94	42.197	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0023971	Pdcd11	99	80.076	ENSSBOG00000030308	PDCD11	99	80.076	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023971	Pdcd11	99	63.116	ENSSHAG00000018258	PDCD11	99	63.116	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023971	Pdcd11	99	46.273	ENSSFOG00015003881	pdcd11	99	46.191	Scleropages_formosus
MGP_SPRETEiJ_G0023971	Pdcd11	99	43.876	ENSSMAG00000006612	pdcd11	99	43.847	Scophthalmus_maximus
MGP_SPRETEiJ_G0023971	Pdcd11	95	48.750	ENSSDUG00000021302	pdcd11	99	48.594	Seriola_dumerili
MGP_SPRETEiJ_G0023971	Pdcd11	80	89.286	ENSSARG00000002540	PDCD11	74	89.286	Sorex_araneus
MGP_SPRETEiJ_G0023971	Pdcd11	97	42.763	ENSSPAG00000017558	pdcd11	100	42.606	Stegastes_partitus
MGP_SPRETEiJ_G0023971	Pdcd11	100	77.041	ENSSSCG00000010599	PDCD11	100	77.316	Sus_scrofa
MGP_SPRETEiJ_G0023971	Pdcd11	73	40.590	ENSTRUG00000014291	pdcd11	99	40.772	Takifugu_rubripes
MGP_SPRETEiJ_G0023971	Pdcd11	99	43.328	ENSTNIG00000012085	pdcd11	99	43.245	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0023971	Pdcd11	100	73.832	ENSTBEG00000001893	PDCD11	100	73.992	Tupaia_belangeri
MGP_SPRETEiJ_G0023971	Pdcd11	99	72.708	ENSTTRG00000003356	PDCD11	99	72.973	Tursiops_truncatus
MGP_SPRETEiJ_G0023971	Pdcd11	99	78.314	ENSUAMG00000018015	PDCD11	100	78.367	Ursus_americanus
MGP_SPRETEiJ_G0023971	Pdcd11	100	76.838	ENSUMAG00000023567	PDCD11	100	76.838	Ursus_maritimus
MGP_SPRETEiJ_G0023971	Pdcd11	68	78.358	ENSVPAG00000007405	PDCD11	83	78.358	Vicugna_pacos
MGP_SPRETEiJ_G0023971	Pdcd11	99	77.990	ENSVVUG00000004457	PDCD11	100	78.256	Vulpes_vulpes
MGP_SPRETEiJ_G0023971	Pdcd11	99	48.630	ENSXETG00000009482	pdcd11	99	49.027	Xenopus_tropicalis
MGP_SPRETEiJ_G0023971	Pdcd11	99	37.147	ENSXCOG00000012420	pdcd11	99	37.627	Xiphophorus_couchianus
MGP_SPRETEiJ_G0023971	Pdcd11	99	43.543	ENSXMAG00000004638	pdcd11	99	43.360	Xiphophorus_maculatus