EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0023978 (Gene tree)
Gene ID: -
Gene Symbol: Stn1
Alias: 0610009H20Rik|2310057J23Rik|Obfc1
Full Name: STN1%2C CST complex subunit
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 39933 bases
Position: chr19:45190230-45230162
Accession: 1915581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0051089	tRNA_anti-codon	PF01336.25	5.4e-07	1	1
MGP_SPRETEiJ_P0051087	tRNA_anti-codon	PF01336.25	6.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0051090	-	559	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0051087	-	2000	-	MGP_SPRETEiJ_P0051087	378 (aa)	-	-
MGP_SPRETEiJ_T0051091	-	523	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0051092	-	1105	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0051093	-	757	-	MGP_SPRETEiJ_P0051093	99 (aa)	-	UPI000333543A
MGP_SPRETEiJ_T0051094	-	438	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0051095	-	691	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0051096	-	132	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0051089	-	1808	-	MGP_SPRETEiJ_P0051089	353 (aa)	-	-
MGP_SPRETEiJ_T0051088	-	809	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0023978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023978's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0023978	Stn1	98	70.081	ENSG00000107960	STN1	100	70.081	Homo_sapiens
MGP_SPRETEiJ_G0023978	Stn1	99	64.456	ENSAMEG00000017971	STN1	99	64.456	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023978	Stn1	98	54.839	ENSAPLG00000006661	STN1	100	54.839	Anas_platyrhynchos
MGP_SPRETEiJ_G0023978	Stn1	98	45.822	ENSACAG00000004954	STN1	100	45.822	Anolis_carolinensis
MGP_SPRETEiJ_G0023978	Stn1	98	69.272	ENSANAG00000038147	STN1	100	69.272	Aotus_nancymaae
MGP_SPRETEiJ_G0023978	Stn1	99	66.578	ENSBTAG00000015019	STN1	100	66.577	Bos_taurus
MGP_SPRETEiJ_G0023978	Stn1	98	68.733	ENSCJAG00000040388	STN1	100	68.733	Callithrix_jacchus
MGP_SPRETEiJ_G0023978	Stn1	98	65.775	ENSCAFG00000010483	STN1	100	65.775	Canis_familiaris
MGP_SPRETEiJ_G0023978	Stn1	98	65.591	ENSCAFG00020010650	STN1	100	65.591	Canis_lupus_dingo
MGP_SPRETEiJ_G0023978	Stn1	99	58.886	ENSCHIG00000003253	-	100	59.416	Capra_hircus
MGP_SPRETEiJ_G0023978	Stn1	98	66.038	ENSCHIG00000019425	-	100	66.577	Capra_hircus
MGP_SPRETEiJ_G0023978	Stn1	86	67.385	ENSCAPG00000016278	STN1	99	67.385	Cavia_aperea
MGP_SPRETEiJ_G0023978	Stn1	100	67.725	ENSCPOG00000006273	STN1	100	67.725	Cavia_porcellus
MGP_SPRETEiJ_G0023978	Stn1	98	69.542	ENSCCAG00000020507	STN1	100	68.733	Cebus_capucinus
MGP_SPRETEiJ_G0023978	Stn1	98	68.733	ENSCATG00000043103	STN1	100	68.733	Cercocebus_atys
MGP_SPRETEiJ_G0023978	Stn1	100	66.931	ENSCLAG00000001617	STN1	100	66.931	Chinchilla_lanigera
MGP_SPRETEiJ_G0023978	Stn1	98	69.003	ENSCSAG00000005318	STN1	100	69.003	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023978	Stn1	98	53.908	ENSCPBG00000024481	STN1	100	53.908	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023978	Stn1	98	69.003	ENSCANG00000029004	STN1	100	69.003	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023978	Stn1	100	69.577	ENSCGRG00001023175	Stn1	100	69.577	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023978	Stn1	100	80.159	ENSCGRG00000004324	Stn1	100	80.159	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023978	Stn1	95	42.779	ENSDARG00000007734	stn1	96	42.779	Danio_rerio
MGP_SPRETEiJ_G0023978	Stn1	91	65.732	ENSDNOG00000011022	STN1	99	65.732	Dasypus_novemcinctus
MGP_SPRETEiJ_G0023978	Stn1	94	68.347	ENSDORG00000005994	Stn1	100	68.194	Dipodomys_ordii
MGP_SPRETEiJ_G0023978	Stn1	97	60.705	ENSETEG00000013967	STN1	99	60.705	Echinops_telfairi
MGP_SPRETEiJ_G0023978	Stn1	98	68.548	ENSEASG00005015134	STN1	100	68.548	Equus_asinus_asinus
MGP_SPRETEiJ_G0023978	Stn1	98	67.742	ENSECAG00000023477	STN1	100	68.280	Equus_caballus
MGP_SPRETEiJ_G0023978	Stn1	94	66.947	ENSFCAG00000030378	STN1	100	66.846	Felis_catus
MGP_SPRETEiJ_G0023978	Stn1	98	54.692	ENSFALG00000008791	STN1	100	54.692	Ficedula_albicollis
MGP_SPRETEiJ_G0023978	Stn1	100	65.608	ENSFDAG00000007528	STN1	100	65.608	Fukomys_damarensis
MGP_SPRETEiJ_G0023978	Stn1	98	54.032	ENSGALG00000008304	STN1	100	54.032	Gallus_gallus
MGP_SPRETEiJ_G0023978	Stn1	91	49.689	ENSGAGG00000003673	STN1	96	49.689	Gopherus_agassizii
MGP_SPRETEiJ_G0023978	Stn1	98	69.811	ENSGGOG00000008979	STN1	100	69.811	Gorilla_gorilla
MGP_SPRETEiJ_G0023978	Stn1	100	65.608	ENSHGLG00000002775	OBFC1	100	65.608	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023978	Stn1	100	65.344	ENSHGLG00100012701	STN1	100	65.344	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023978	Stn1	96	40.811	ENSHCOG00000002048	stn1	98	40.811	Hippocampus_comes
MGP_SPRETEiJ_G0023978	Stn1	100	67.196	ENSSTOG00000011905	STN1	100	67.196	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023978	Stn1	100	65.172	ENSJJAG00000020389	Stn1	100	65.172	Jaculus_jaculus
MGP_SPRETEiJ_G0023978	Stn1	97	45.213	ENSLACG00000012381	STN1	99	45.213	Latimeria_chalumnae
MGP_SPRETEiJ_G0023978	Stn1	95	66.298	ENSLAFG00000004232	STN1	99	65.617	Loxodonta_africana
MGP_SPRETEiJ_G0023978	Stn1	98	68.733	ENSMFAG00000041817	STN1	100	68.733	Macaca_fascicularis
MGP_SPRETEiJ_G0023978	Stn1	98	68.733	ENSMMUG00000015323	STN1	100	68.733	Macaca_mulatta
MGP_SPRETEiJ_G0023978	Stn1	98	69.003	ENSMNEG00000031906	STN1	100	69.003	Macaca_nemestrina
MGP_SPRETEiJ_G0023978	Stn1	98	69.003	ENSMLEG00000040619	STN1	100	69.003	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023978	Stn1	99	56.085	ENSMGAG00000010550	STN1	99	56.085	Meleagris_gallopavo
MGP_SPRETEiJ_G0023978	Stn1	99	81.117	ENSMAUG00000015671	Stn1	99	81.117	Mesocricetus_auratus
MGP_SPRETEiJ_G0023978	Stn1	98	66.577	ENSMICG00000012547	STN1	100	67.385	Microcebus_murinus
MGP_SPRETEiJ_G0023978	Stn1	100	71.782	ENSMOCG00000009637	Stn1	100	71.782	Microtus_ochrogaster
MGP_SPRETEiJ_G0023978	Stn1	98	58.177	ENSMODG00000011003	STN1	100	58.177	Monodelphis_domestica
MGP_SPRETEiJ_G0023978	Stn1	100	96.032	MGP_CAROLIEiJ_G0023057	Stn1	100	96.032	Mus_caroli
MGP_SPRETEiJ_G0023978	Stn1	100	99.471	ENSMUSG00000042694	Stn1	100	99.471	Mus_musculus
MGP_SPRETEiJ_G0023978	Stn1	100	93.915	MGP_PahariEiJ_G0014547	Stn1	100	93.915	Mus_pahari
MGP_SPRETEiJ_G0023978	Stn1	98	61.725	ENSMPUG00000016800	STN1	100	61.725	Mustela_putorius_furo
MGP_SPRETEiJ_G0023978	Stn1	99	66.492	ENSMLUG00000002037	STN1	99	66.492	Myotis_lucifugus
MGP_SPRETEiJ_G0023978	Stn1	100	72.751	ENSNGAG00000023986	Stn1	100	72.751	Nannospalax_galili
MGP_SPRETEiJ_G0023978	Stn1	98	70.081	ENSNLEG00000015282	STN1	100	70.081	Nomascus_leucogenys
MGP_SPRETEiJ_G0023978	Stn1	98	66.307	ENSOPRG00000010707	STN1	100	66.307	Ochotona_princeps
MGP_SPRETEiJ_G0023978	Stn1	100	60.847	ENSODEG00000007270	STN1	100	60.847	Octodon_degus
MGP_SPRETEiJ_G0023978	Stn1	96	56.630	ENSOANG00000001628	STN1	98	56.630	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023978	Stn1	100	70.106	ENSOCUG00000003028	STN1	100	70.106	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023978	Stn1	96	41.867	ENSORLG00000002353	stn1	99	41.867	Oryzias_latipes
MGP_SPRETEiJ_G0023978	Stn1	96	42.627	ENSORLG00020012935	stn1	98	42.627	Oryzias_latipes_hni
MGP_SPRETEiJ_G0023978	Stn1	96	42.627	ENSORLG00015012154	stn1	98	42.627	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0023978	Stn1	99	65.172	ENSOGAG00000008722	STN1	99	65.172	Otolemur_garnettii
MGP_SPRETEiJ_G0023978	Stn1	99	65.526	ENSOARG00000004883	STN1	99	65.526	Ovis_aries
MGP_SPRETEiJ_G0023978	Stn1	98	69.811	ENSPPAG00000030947	STN1	100	69.811	Pan_paniscus
MGP_SPRETEiJ_G0023978	Stn1	94	67.227	ENSPPRG00000010476	STN1	100	67.116	Panthera_pardus
MGP_SPRETEiJ_G0023978	Stn1	94	65.928	ENSPTIG00000017333	STN1	100	65.867	Panthera_tigris_altaica
MGP_SPRETEiJ_G0023978	Stn1	98	69.811	ENSPTRG00000002919	STN1	100	69.811	Pan_troglodytes
MGP_SPRETEiJ_G0023978	Stn1	98	68.733	ENSPANG00000020926	STN1	100	68.733	Papio_anubis
MGP_SPRETEiJ_G0023978	Stn1	95	39.782	ENSPKIG00000000721	stn1	97	39.782	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0023978	Stn1	98	52.151	ENSPSIG00000010802	STN1	100	52.151	Pelodiscus_sinensis
MGP_SPRETEiJ_G0023978	Stn1	100	77.836	ENSPEMG00000013944	Stn1	100	77.836	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023978	Stn1	97	59.016	ENSPCIG00000024497	STN1	99	59.016	Phascolarctos_cinereus
MGP_SPRETEiJ_G0023978	Stn1	98	69.811	ENSPPYG00000002628	STN1	100	69.811	Pongo_abelii
MGP_SPRETEiJ_G0023978	Stn1	98	68.194	ENSPCOG00000017648	STN1	100	68.194	Propithecus_coquereli
MGP_SPRETEiJ_G0023978	Stn1	98	64.151	ENSPVAG00000004187	STN1	100	64.151	Pteropus_vampyrus
MGP_SPRETEiJ_G0023978	Stn1	100	87.037	ENSRNOG00000020376	Stn1	100	87.037	Rattus_norvegicus
MGP_SPRETEiJ_G0023978	Stn1	98	69.003	ENSRBIG00000039819	STN1	100	69.003	Rhinopithecus_bieti
MGP_SPRETEiJ_G0023978	Stn1	98	69.272	ENSRROG00000013903	STN1	100	69.272	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023978	Stn1	98	70.081	ENSSBOG00000031516	STN1	100	69.272	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023978	Stn1	97	59.128	ENSSHAG00000017550	STN1	99	59.128	Sarcophilus_harrisii
MGP_SPRETEiJ_G0023978	Stn1	96	41.779	ENSSFOG00015004107	stn1	98	41.779	Scleropages_formosus
MGP_SPRETEiJ_G0023978	Stn1	99	65.867	ENSSSCG00000010605	STN1	86	65.867	Sus_scrofa
MGP_SPRETEiJ_G0023978	Stn1	98	53.887	ENSTGUG00000010354	STN1	100	53.887	Taeniopygia_guttata
MGP_SPRETEiJ_G0023978	Stn1	98	44.118	ENSTNIG00000014162	stn1	98	44.118	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0023978	Stn1	65	68.878	ENSTBEG00000000659	STN1	66	68.878	Tupaia_belangeri
MGP_SPRETEiJ_G0023978	Stn1	98	66.038	ENSTTRG00000003375	STN1	100	66.038	Tursiops_truncatus
MGP_SPRETEiJ_G0023978	Stn1	98	61.456	ENSUMAG00000023647	STN1	100	61.456	Ursus_maritimus
MGP_SPRETEiJ_G0023978	Stn1	98	67.655	ENSVPAG00000002530	STN1	100	67.655	Vicugna_pacos
MGP_SPRETEiJ_G0023978	Stn1	99	65.079	ENSVVUG00000004636	-	61	65.079	Vulpes_vulpes
MGP_SPRETEiJ_G0023978	Stn1	94	45.580	ENSXETG00000011402	STN1	99	44.744	Xenopus_tropicalis