EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0023993 (Gene tree)
Gene ID
-
Gene Symbol
Smndc1
Alias
2410004J23Rik|4933440I19Rik
Full Name
survival motor neuron domain containing 1
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Minus strand
Length
13098 bases
Position
chr19:51356790-51369887
Accession
1923729
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0051146SMNPF06003.123.5e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0051146-2139-MGP_SPRETEiJ_P0051146238 (aa)-UPI00000224F5
Gene Model
Click here to download MGP_SPRETEiJ_G0023993's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0023993's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0023993Smndc110099.580ENSG00000119953SMNDC110099.580Homo_sapiens
MGP_SPRETEiJ_G0023993Smndc110075.210ENSAPOG00000021772smndc110075.210Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0023993Smndc110099.160ENSAMEG00000005251SMNDC110099.160Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0023993Smndc110076.987ENSACIG00000004819smndc110076.987Amphilophus_citrinellus
MGP_SPRETEiJ_G0023993Smndc110075.210ENSAOCG00000017869smndc110075.210Amphiprion_ocellaris
MGP_SPRETEiJ_G0023993Smndc110075.210ENSAPEG00000007752smndc110075.210Amphiprion_percula
MGP_SPRETEiJ_G0023993Smndc110076.050ENSATEG00000006830smndc110076.050Anabas_testudineus
MGP_SPRETEiJ_G0023993Smndc18395.455ENSAPLG00000004322SMNDC110095.455Anas_platyrhynchos
MGP_SPRETEiJ_G0023993Smndc110094.538ENSACAG00000005983SMNDC110094.538Anolis_carolinensis
MGP_SPRETEiJ_G0023993Smndc110099.160ENSANAG00000032875SMNDC110099.160Aotus_nancymaae
MGP_SPRETEiJ_G0023993Smndc110076.050ENSACLG00000016360smndc110076.050Astatotilapia_calliptera
MGP_SPRETEiJ_G0023993Smndc110076.050ENSAMXG00000020310smndc110076.050Astyanax_mexicanus
MGP_SPRETEiJ_G0023993Smndc110098.739ENSBTAG00000000551SMNDC110098.739Bos_taurus
MGP_SPRETEiJ_G0023993Smndc110099.160ENSCJAG00000018624SMNDC110099.160Callithrix_jacchus
MGP_SPRETEiJ_G0023993Smndc110099.160ENSCAFG00000010720SMNDC110099.160Canis_familiaris
MGP_SPRETEiJ_G0023993Smndc110099.160ENSCAFG00020011913SMNDC110099.160Canis_lupus_dingo
MGP_SPRETEiJ_G0023993Smndc110098.739ENSCHIG00000010604SMNDC110098.739Capra_hircus
MGP_SPRETEiJ_G0023993Smndc110098.739ENSTSYG00000026454SMNDC110098.739Carlito_syrichta
MGP_SPRETEiJ_G0023993Smndc18498.010ENSCAPG00000009132SMNDC110098.010Cavia_aperea
MGP_SPRETEiJ_G0023993Smndc110098.319ENSCPOG00000031666SMNDC110098.319Cavia_porcellus
MGP_SPRETEiJ_G0023993Smndc110099.160ENSCCAG00000021793SMNDC110099.160Cebus_capucinus
MGP_SPRETEiJ_G0023993Smndc110098.739ENSCATG00000035910SMNDC110098.739Cercocebus_atys
MGP_SPRETEiJ_G0023993Smndc110097.899ENSCLAG00000002838SMNDC110097.899Chinchilla_lanigera
MGP_SPRETEiJ_G0023993Smndc110099.160ENSCSAG00000005169SMNDC110099.160Chlorocebus_sabaeus
MGP_SPRETEiJ_G0023993Smndc18198.446ENSCHOG00000002936SMNDC110098.446Choloepus_hoffmanni
MGP_SPRETEiJ_G0023993Smndc110097.059ENSCPBG00000012837SMNDC110097.059Chrysemys_picta_bellii
MGP_SPRETEiJ_G0023993Smndc110078.571ENSCANG00000036994-10078.571Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023993Smndc110099.160ENSCANG00000031720-10099.160Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023993Smndc110091.597ENSCANG00000034620-10091.597Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0023993Smndc110098.319ENSCGRG00001012973Smndc110098.319Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0023993Smndc110098.319ENSCGRG00000012396Smndc110098.319Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0023993Smndc110076.050ENSCSEG00000015621smndc110076.050Cynoglossus_semilaevis
MGP_SPRETEiJ_G0023993Smndc110076.891ENSCVAG00000020432smndc110076.891Cyprinodon_variegatus
MGP_SPRETEiJ_G0023993Smndc110078.571ENSDARG00000056235smndc110078.571Danio_rerio
MGP_SPRETEiJ_G0023993Smndc110099.160ENSDNOG00000016387SMNDC18399.160Dasypus_novemcinctus
MGP_SPRETEiJ_G0023993Smndc110099.160ENSDORG00000023715Smndc110099.160Dipodomys_ordii
MGP_SPRETEiJ_G0023993Smndc19541.767FBgn0039977CG174549842.972Drosophila_melanogaster
MGP_SPRETEiJ_G0023993Smndc110070.954ENSEBUG00000010929smndc110070.954Eptatretus_burgeri
MGP_SPRETEiJ_G0023993Smndc110099.160ENSEASG00005014930SMNDC110099.160Equus_asinus_asinus
MGP_SPRETEiJ_G0023993Smndc110099.160ENSECAG00000029973SMNDC110099.160Equus_caballus
MGP_SPRETEiJ_G0023993Smndc18369.697ENSEEUG00000013407-10069.697Erinaceus_europaeus
MGP_SPRETEiJ_G0023993Smndc110077.731ENSELUG00000000227smndc110077.731Esox_lucius
MGP_SPRETEiJ_G0023993Smndc110099.160ENSFCAG00000027353SMNDC110099.160Felis_catus
MGP_SPRETEiJ_G0023993Smndc110095.378ENSFALG00000002306SMNDC110095.378Ficedula_albicollis
MGP_SPRETEiJ_G0023993Smndc110098.739ENSFDAG00000006468SMNDC110098.739Fukomys_damarensis
MGP_SPRETEiJ_G0023993Smndc110076.471ENSFHEG00000020150smndc110076.471Fundulus_heteroclitus
MGP_SPRETEiJ_G0023993Smndc110076.891ENSGMOG00000016585smndc110076.891Gadus_morhua
MGP_SPRETEiJ_G0023993Smndc110095.378ENSGALG00000008561SMNDC110095.378Gallus_gallus
MGP_SPRETEiJ_G0023993Smndc110075.210ENSGAFG00000011582smndc110075.210Gambusia_affinis
MGP_SPRETEiJ_G0023993Smndc110075.630ENSGACG00000009468smndc110075.630Gasterosteus_aculeatus
MGP_SPRETEiJ_G0023993Smndc110097.059ENSGAGG00000024547SMNDC110097.059Gopherus_agassizii
MGP_SPRETEiJ_G0023993Smndc110099.160ENSGGOG00000010071SMNDC110099.160Gorilla_gorilla
MGP_SPRETEiJ_G0023993Smndc110076.050ENSHBUG00000017596smndc110076.050Haplochromis_burtoni
MGP_SPRETEiJ_G0023993Smndc110098.739ENSHGLG00000013390-10098.739Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023993Smndc110068.443ENSHGLG00000001157-10065.306Heterocephalus_glaber_female
MGP_SPRETEiJ_G0023993Smndc110098.739ENSHGLG00100004814-10098.739Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023993Smndc110076.639ENSHGLG00100004278-10076.230Heterocephalus_glaber_male
MGP_SPRETEiJ_G0023993Smndc110074.895ENSHCOG00000000783smndc110074.895Hippocampus_comes
MGP_SPRETEiJ_G0023993Smndc110077.311ENSIPUG00000004217smndc110077.311Ictalurus_punctatus
MGP_SPRETEiJ_G0023993Smndc110098.739ENSSTOG00000006088SMNDC110098.739Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0023993Smndc110098.319ENSJJAG00000019974Smndc110098.319Jaculus_jaculus
MGP_SPRETEiJ_G0023993Smndc110075.210ENSKMAG00000020134smndc110075.210Kryptolebias_marmoratus
MGP_SPRETEiJ_G0023993Smndc110074.370ENSLBEG00000004598smndc110074.370Labrus_bergylta
MGP_SPRETEiJ_G0023993Smndc110084.034ENSLACG00000007784SMNDC110084.034Latimeria_chalumnae
MGP_SPRETEiJ_G0023993Smndc110084.034ENSLOCG00000012355smndc110084.034Lepisosteus_oculatus
MGP_SPRETEiJ_G0023993Smndc110098.739ENSLAFG00000014353SMNDC110098.739Loxodonta_africana
MGP_SPRETEiJ_G0023993Smndc110099.160ENSMFAG00000002433-10099.160Macaca_fascicularis
MGP_SPRETEiJ_G0023993Smndc110081.092ENSMFAG00000038381-10081.092Macaca_fascicularis
MGP_SPRETEiJ_G0023993Smndc110099.160ENSMMUG00000007775SMNDC110099.160Macaca_mulatta
MGP_SPRETEiJ_G0023993Smndc110081.092ENSMMUG00000045875-10081.092Macaca_mulatta
MGP_SPRETEiJ_G0023993Smndc110099.160ENSMNEG00000042963-10099.160Macaca_nemestrina
MGP_SPRETEiJ_G0023993Smndc110087.815ENSMNEG00000033853-10087.815Macaca_nemestrina
MGP_SPRETEiJ_G0023993Smndc110092.887ENSMLEG00000040236SMNDC110092.469Mandrillus_leucophaeus
MGP_SPRETEiJ_G0023993Smndc18973.239ENSMAMG00000018233smndc18773.239Mastacembelus_armatus
MGP_SPRETEiJ_G0023993Smndc110076.050ENSMZEG00005027510smndc110076.050Maylandia_zebra
MGP_SPRETEiJ_G0023993Smndc18495.000ENSMGAG00000010777SMNDC18495.000Meleagris_gallopavo
MGP_SPRETEiJ_G0023993Smndc19979.747ENSMAUG00000005459-9379.747Mesocricetus_auratus
MGP_SPRETEiJ_G0023993Smndc110099.160ENSMAUG00000012243-10099.160Mesocricetus_auratus
MGP_SPRETEiJ_G0023993Smndc110098.319ENSMICG00000027336-10098.319Microcebus_murinus
MGP_SPRETEiJ_G0023993Smndc110085.294ENSMICG00000031640-10085.294Microcebus_murinus
MGP_SPRETEiJ_G0023993Smndc110098.739ENSMOCG00000002458Smndc110098.739Microtus_ochrogaster
MGP_SPRETEiJ_G0023993Smndc110076.471ENSMMOG00000008856smndc110076.471Mola_mola
MGP_SPRETEiJ_G0023993Smndc110099.160ENSMODG00000010542SMNDC110099.160Monodelphis_domestica
MGP_SPRETEiJ_G0023993Smndc110076.050ENSMALG00000017598smndc110076.050Monopterus_albus
MGP_SPRETEiJ_G0023993Smndc110099.580MGP_CAROLIEiJ_G0023072Smndc110099.580Mus_caroli
MGP_SPRETEiJ_G0023993Smndc1100100.000ENSMUSG00000025024Smndc1100100.000Mus_musculus
MGP_SPRETEiJ_G0023993Smndc110099.580MGP_PahariEiJ_G0014560Smndc110099.580Mus_pahari
MGP_SPRETEiJ_G0023993Smndc110099.160ENSMPUG00000002089SMNDC110099.160Mustela_putorius_furo
MGP_SPRETEiJ_G0023993Smndc110097.899ENSMLUG00000016007SMNDC110097.899Myotis_lucifugus
MGP_SPRETEiJ_G0023993Smndc110098.319ENSNGAG00000006833Smndc110098.319Nannospalax_galili
MGP_SPRETEiJ_G0023993Smndc110075.630ENSNBRG00000017089smndc110075.630Neolamprologus_brichardi
MGP_SPRETEiJ_G0023993Smndc110099.160ENSNLEG00000015471SMNDC110099.160Nomascus_leucogenys
MGP_SPRETEiJ_G0023993Smndc18258.000ENSMEUG00000010120-9958.500Notamacropus_eugenii
MGP_SPRETEiJ_G0023993Smndc110098.319ENSOPRG00000015348SMNDC110098.319Ochotona_princeps
MGP_SPRETEiJ_G0023993Smndc110069.328ENSODEG00000007594-10066.387Octodon_degus
MGP_SPRETEiJ_G0023993Smndc110075.630ENSONIG00000000434smndc110075.630Oreochromis_niloticus
MGP_SPRETEiJ_G0023993Smndc110097.899ENSOANG00000001598SMNDC110097.899Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0023993Smndc110074.790ENSOCUG00000012274-10076.471Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023993Smndc110098.319ENSOCUG00000008145-10098.319Oryctolagus_cuniculus
MGP_SPRETEiJ_G0023993Smndc110075.630ENSORLG00000005934smndc19575.630Oryzias_latipes
MGP_SPRETEiJ_G0023993Smndc110075.630ENSORLG00020008796smndc19575.630Oryzias_latipes_hni
MGP_SPRETEiJ_G0023993Smndc110075.630ENSORLG00015013666smndc110075.630Oryzias_latipes_hsok
MGP_SPRETEiJ_G0023993Smndc110077.311ENSOMEG00000007590smndc110077.311Oryzias_melastigma
MGP_SPRETEiJ_G0023993Smndc110098.739ENSOGAG00000000571SMNDC110098.739Otolemur_garnettii
MGP_SPRETEiJ_G0023993Smndc110098.739ENSOARG00000009500SMNDC110098.739Ovis_aries
MGP_SPRETEiJ_G0023993Smndc110099.160ENSPPAG00000027815SMNDC110099.160Pan_paniscus
MGP_SPRETEiJ_G0023993Smndc110099.160ENSPPRG00000013749SMNDC110099.160Panthera_pardus
MGP_SPRETEiJ_G0023993Smndc110099.160ENSPTIG00000011451SMNDC110099.160Panthera_tigris_altaica
MGP_SPRETEiJ_G0023993Smndc110099.160ENSPTRG00000002937SMNDC110099.160Pan_troglodytes
MGP_SPRETEiJ_G0023993Smndc110093.277ENSPANG00000031346-10093.277Papio_anubis
MGP_SPRETEiJ_G0023993Smndc110099.160ENSPANG00000020805-10099.160Papio_anubis
MGP_SPRETEiJ_G0023993Smndc110080.672ENSPKIG00000017164smndc110080.672Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0023993Smndc110097.479ENSPSIG00000012257SMNDC110097.479Pelodiscus_sinensis
MGP_SPRETEiJ_G0023993Smndc110073.529ENSPMGG00000015651smndc110073.529Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0023993Smndc110099.160ENSPEMG00000022058Smndc110099.160Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0023993Smndc110067.213ENSPMAG00000007705smndc110067.623Petromyzon_marinus
MGP_SPRETEiJ_G0023993Smndc19762.174ENSPCIG00000009693-10062.174Phascolarctos_cinereus
MGP_SPRETEiJ_G0023993Smndc110099.160ENSPCIG00000018419SMNDC110099.160Phascolarctos_cinereus
MGP_SPRETEiJ_G0023993Smndc110075.630ENSPFOG00000017113smndc110075.630Poecilia_formosa
MGP_SPRETEiJ_G0023993Smndc110076.050ENSPLAG00000010372smndc110076.050Poecilia_latipinna
MGP_SPRETEiJ_G0023993Smndc110076.050ENSPMEG00000012288smndc110076.050Poecilia_mexicana
MGP_SPRETEiJ_G0023993Smndc110075.210ENSPREG00000012279smndc110075.210Poecilia_reticulata
MGP_SPRETEiJ_G0023993Smndc110099.160ENSPPYG00000002643SMNDC110099.160Pongo_abelii
MGP_SPRETEiJ_G0023993Smndc18198.446ENSPCAG00000016183SMNDC110098.446Procavia_capensis
MGP_SPRETEiJ_G0023993Smndc110098.739ENSPCOG00000024343SMNDC110098.739Propithecus_coquereli
MGP_SPRETEiJ_G0023993Smndc110076.471ENSPVAG00000004368SMNDC110076.471Pteropus_vampyrus
MGP_SPRETEiJ_G0023993Smndc19269.778ENSPNYG00000024093smndc19869.778Pundamilia_nyererei
MGP_SPRETEiJ_G0023993Smndc110076.471ENSPNAG00000025285smndc110076.471Pygocentrus_nattereri
MGP_SPRETEiJ_G0023993Smndc110099.580ENSRNOG00000014833Smndc110099.580Rattus_norvegicus
MGP_SPRETEiJ_G0023993Smndc110098.739ENSRBIG00000000224-10098.739Rhinopithecus_bieti
MGP_SPRETEiJ_G0023993Smndc110082.773ENSRBIG00000032452-10082.773Rhinopithecus_bieti
MGP_SPRETEiJ_G0023993Smndc110083.193ENSRROG00000039125-10083.193Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023993Smndc110099.160ENSRROG00000044992-10099.160Rhinopithecus_roxellana
MGP_SPRETEiJ_G0023993Smndc110099.160ENSSBOG00000026789SMNDC110099.160Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0023993Smndc110099.160ENSSHAG00000015189SMNDC110099.160Sarcophilus_harrisii
MGP_SPRETEiJ_G0023993Smndc110079.832ENSSFOG00015008311smndc110079.832Scleropages_formosus
MGP_SPRETEiJ_G0023993Smndc110075.630ENSSMAG00000020118smndc110075.630Scophthalmus_maximus
MGP_SPRETEiJ_G0023993Smndc110076.471ENSSDUG00000015330smndc110076.471Seriola_dumerili
MGP_SPRETEiJ_G0023993Smndc110076.471ENSSLDG00000017325smndc110076.471Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0023993Smndc110097.899ENSSARG00000006063SMNDC110097.899Sorex_araneus
MGP_SPRETEiJ_G0023993Smndc110095.798ENSSPUG00000004574SMNDC110095.798Sphenodon_punctatus
MGP_SPRETEiJ_G0023993Smndc110074.370ENSSPAG00000000338smndc110074.370Stegastes_partitus
MGP_SPRETEiJ_G0023993Smndc110098.739ENSSSCG00000030507SMNDC110098.739Sus_scrofa
MGP_SPRETEiJ_G0023993Smndc110095.378ENSTGUG00000010599SMNDC110095.378Taeniopygia_guttata
MGP_SPRETEiJ_G0023993Smndc110073.950ENSTRUG00000023281smndc110073.950Takifugu_rubripes
MGP_SPRETEiJ_G0023993Smndc110074.790ENSTNIG00000013331smndc110074.790Tetraodon_nigroviridis
MGP_SPRETEiJ_G0023993Smndc110098.739ENSTBEG00000014337SMNDC110098.739Tupaia_belangeri
MGP_SPRETEiJ_G0023993Smndc110099.160ENSUAMG00000008142SMNDC110099.160Ursus_americanus
MGP_SPRETEiJ_G0023993Smndc110099.160ENSUMAG00000023722SMNDC110099.160Ursus_maritimus
MGP_SPRETEiJ_G0023993Smndc18398.485ENSVPAG00000003402SMNDC110098.485Vicugna_pacos
MGP_SPRETEiJ_G0023993Smndc110099.160ENSVVUG00000007820SMNDC110099.160Vulpes_vulpes
MGP_SPRETEiJ_G0023993Smndc16081.690ENSXETG00000015415SMNDC110081.690Xenopus_tropicalis
MGP_SPRETEiJ_G0023993Smndc110075.210ENSXCOG00000009159smndc110075.210Xiphophorus_couchianus
MGP_SPRETEiJ_G0023993Smndc110074.790ENSXMAG00000012755smndc110074.790Xiphophorus_maculatus

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