EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0024242 (Gene tree)
Gene ID: -
Gene Symbol: Surf6
Alias: D2Wsu129e|Surf-6
Full Name: surfeit gene 6
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 21017 bases
Position: chr2:24783478-24804494
Accession: 98447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0052453	SURF6	PF04935.12	4.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0052451	-	652	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0052450	-	1371	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0052453	-	2979	-	MGP_SPRETEiJ_P0052453	355 (aa)	-	-
MGP_SPRETEiJ_T0052452	-	687	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0052455	-	748	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0052454	-	894	-	MGP_SPRETEiJ_P0052454	208 (aa)	-	-
MGP_SPRETEiJ_T0052456	-	373	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0024242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0024242's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0024242	Surf6	99	73.056	ENSG00000148296	SURF6	99	73.056	Homo_sapiens
MGP_SPRETEiJ_G0024242	Surf6	99	44.687	ENSAPOG00000021015	surf6	99	41.989	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0024242	Surf6	99	66.125	ENSAMEG00000011733	SURF6	100	66.125	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0024242	Surf6	99	43.089	ENSAOCG00000015839	surf6	99	40.110	Amphiprion_ocellaris
MGP_SPRETEiJ_G0024242	Surf6	99	42.818	ENSAPEG00000022442	surf6	99	39.835	Amphiprion_percula
MGP_SPRETEiJ_G0024242	Surf6	99	43.836	ENSATEG00000012640	surf6	99	44.110	Anabas_testudineus
MGP_SPRETEiJ_G0024242	Surf6	88	52.830	ENSAPLG00000005069	SURF6	87	54.828	Anas_platyrhynchos
MGP_SPRETEiJ_G0024242	Surf6	100	70.028	ENSANAG00000021046	SURF6	100	71.148	Aotus_nancymaae
MGP_SPRETEiJ_G0024242	Surf6	99	48.219	ENSACLG00000027819	surf6	99	43.132	Astatotilapia_calliptera
MGP_SPRETEiJ_G0024242	Surf6	99	44.297	ENSAMXG00000012546	surf6	99	43.817	Astyanax_mexicanus
MGP_SPRETEiJ_G0024242	Surf6	100	68.347	ENSBTAG00000011554	SURF6	100	68.347	Bos_taurus
MGP_SPRETEiJ_G0024242	Surf6	100	69.081	ENSCJAG00000017951	SURF6	100	69.359	Callithrix_jacchus
MGP_SPRETEiJ_G0024242	Surf6	100	62.817	ENSCAFG00000005159	-	100	62.674	Canis_familiaris
MGP_SPRETEiJ_G0024242	Surf6	100	69.014	ENSCAFG00000019758	-	100	69.081	Canis_familiaris
MGP_SPRETEiJ_G0024242	Surf6	100	69.014	ENSCAFG00020001156	SURF6	100	69.081	Canis_lupus_dingo
MGP_SPRETEiJ_G0024242	Surf6	100	67.416	ENSCHIG00000025220	SURF6	100	67.416	Capra_hircus
MGP_SPRETEiJ_G0024242	Surf6	100	71.910	ENSTSYG00000008431	SURF6	100	71.910	Carlito_syrichta
MGP_SPRETEiJ_G0024242	Surf6	91	72.308	ENSCAPG00000010696	SURF6	100	72.308	Cavia_aperea
MGP_SPRETEiJ_G0024242	Surf6	100	72.067	ENSCPOG00000030454	SURF6	100	72.626	Cavia_porcellus
MGP_SPRETEiJ_G0024242	Surf6	64	78.261	ENSCCAG00000025688	SURF6	100	78.261	Cebus_capucinus
MGP_SPRETEiJ_G0024242	Surf6	99	72.778	ENSCATG00000042004	SURF6	99	72.778	Cercocebus_atys
MGP_SPRETEiJ_G0024242	Surf6	99	73.669	ENSCLAG00000004429	SURF6	89	73.950	Chinchilla_lanigera
MGP_SPRETEiJ_G0024242	Surf6	99	69.337	ENSCSAG00000015203	-	99	69.613	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0024242	Surf6	99	73.056	ENSCSAG00000018888	-	99	73.333	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0024242	Surf6	99	53.297	ENSCPBG00000021169	SURF6	99	54.247	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0024242	Surf6	59	86.875	ENSCANG00000035022	SURF6	84	86.875	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0024242	Surf6	100	83.662	ENSCGRG00000017035	Surf6	100	83.662	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0024242	Surf6	99	44.972	ENSCSEG00000015172	surf6	99	44.972	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0024242	Surf6	75	50.554	ENSCVAG00000015730	surf6	82	50.746	Cyprinodon_variegatus
MGP_SPRETEiJ_G0024242	Surf6	99	40.872	ENSDARG00000035427	surf6	100	40.872	Danio_rerio
MGP_SPRETEiJ_G0024242	Surf6	100	69.663	ENSDNOG00000049519	SURF6	97	69.663	Dasypus_novemcinctus
MGP_SPRETEiJ_G0024242	Surf6	100	75.211	ENSDORG00000010761	Surf6	100	75.211	Dipodomys_ordii
MGP_SPRETEiJ_G0024242	Surf6	91	62.883	ENSETEG00000004239	SURF6	99	65.337	Echinops_telfairi
MGP_SPRETEiJ_G0024242	Surf6	100	67.416	ENSEASG00005009885	SURF6	100	67.416	Equus_asinus_asinus
MGP_SPRETEiJ_G0024242	Surf6	100	68.258	ENSECAG00000021229	SURF6	100	68.258	Equus_caballus
MGP_SPRETEiJ_G0024242	Surf6	81	68.858	ENSEEUG00000011071	-	100	68.858	Erinaceus_europaeus
MGP_SPRETEiJ_G0024242	Surf6	63	73.778	ENSEEUG00000001732	-	100	73.778	Erinaceus_europaeus
MGP_SPRETEiJ_G0024242	Surf6	100	68.451	ENSFCAG00000040914	SURF6	100	68.451	Felis_catus
MGP_SPRETEiJ_G0024242	Surf6	99	50.416	ENSFALG00000001495	SURF6	99	49.180	Ficedula_albicollis
MGP_SPRETEiJ_G0024242	Surf6	90	72.531	ENSFDAG00000007052	SURF6	99	72.531	Fukomys_damarensis
MGP_SPRETEiJ_G0024242	Surf6	99	44.959	ENSFHEG00000002290	surf6	99	46.322	Fundulus_heteroclitus
MGP_SPRETEiJ_G0024242	Surf6	99	50.693	ENSGALG00000038413	SURF6	100	50.549	Gallus_gallus
MGP_SPRETEiJ_G0024242	Surf6	99	45.013	ENSGAFG00000013618	surf6	99	42.061	Gambusia_affinis
MGP_SPRETEiJ_G0024242	Surf6	99	50.928	ENSGAGG00000010286	SURF6	99	51.194	Gopherus_agassizii
MGP_SPRETEiJ_G0024242	Surf6	99	73.333	ENSGGOG00000014426	SURF6	99	73.333	Gorilla_gorilla
MGP_SPRETEiJ_G0024242	Surf6	99	48.219	ENSHBUG00000008764	surf6	99	43.132	Haplochromis_burtoni
MGP_SPRETEiJ_G0024242	Surf6	100	73.184	ENSHGLG00000013027	SURF6	100	73.184	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0024242	Surf6	91	73.538	ENSHGLG00100015654	SURF6	82	73.538	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0024242	Surf6	99	45.879	ENSHCOG00000001639	surf6	99	41.322	Hippocampus_comes
MGP_SPRETEiJ_G0024242	Surf6	99	37.705	ENSIPUG00000008066	surf6	73	44.151	Ictalurus_punctatus
MGP_SPRETEiJ_G0024242	Surf6	100	68.611	ENSSTOG00000020164	SURF6	100	70.556	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0024242	Surf6	100	74.157	ENSJJAG00000016287	Surf6	100	75.843	Jaculus_jaculus
MGP_SPRETEiJ_G0024242	Surf6	99	46.089	ENSKMAG00000009936	surf6	100	43.094	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0024242	Surf6	97	46.197	ENSLBEG00000024311	surf6	99	46.479	Labrus_bergylta
MGP_SPRETEiJ_G0024242	Surf6	98	45.070	ENSLACG00000013322	SURF6	99	43.785	Latimeria_chalumnae
MGP_SPRETEiJ_G0024242	Surf6	100	45.722	ENSLOCG00000004072	surf6	100	45.989	Lepisosteus_oculatus
MGP_SPRETEiJ_G0024242	Surf6	100	69.468	ENSLAFG00000026419	SURF6	100	69.468	Loxodonta_africana
MGP_SPRETEiJ_G0024242	Surf6	90	73.089	ENSMMUG00000022339	-	99	72.673	Macaca_mulatta
MGP_SPRETEiJ_G0024242	Surf6	99	72.500	ENSMNEG00000033787	SURF6	99	72.778	Macaca_nemestrina
MGP_SPRETEiJ_G0024242	Surf6	99	72.500	ENSMLEG00000028750	SURF6	99	72.500	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0024242	Surf6	99	40.503	ENSMAMG00000018269	surf6	99	42.061	Mastacembelus_armatus
MGP_SPRETEiJ_G0024242	Surf6	99	48.219	ENSMZEG00005003188	surf6	99	43.132	Maylandia_zebra
MGP_SPRETEiJ_G0024242	Surf6	99	50.416	ENSMGAG00000006371	SURF6	100	50.416	Meleagris_gallopavo
MGP_SPRETEiJ_G0024242	Surf6	100	85.634	ENSMAUG00000020676	Surf6	100	85.634	Mesocricetus_auratus
MGP_SPRETEiJ_G0024242	Surf6	100	73.315	ENSMICG00000046077	SURF6	100	73.315	Microcebus_murinus
MGP_SPRETEiJ_G0024242	Surf6	100	85.352	ENSMOCG00000011956	Surf6	100	85.352	Microtus_ochrogaster
MGP_SPRETEiJ_G0024242	Surf6	99	60.784	ENSMODG00000012744	SURF6	99	61.064	Monodelphis_domestica
MGP_SPRETEiJ_G0024242	Surf6	99	40.659	ENSMALG00000012310	surf6	99	40.659	Monopterus_albus
MGP_SPRETEiJ_G0024242	Surf6	100	98.028	MGP_CAROLIEiJ_G0023325	Surf6	100	98.028	Mus_caroli
MGP_SPRETEiJ_G0024242	Surf6	100	98.310	ENSMUSG00000036160	Surf6	100	98.310	Mus_musculus
MGP_SPRETEiJ_G0024242	Surf6	100	94.366	MGP_PahariEiJ_G0024782	Surf6	100	94.366	Mus_pahari
MGP_SPRETEiJ_G0024242	Surf6	99	64.850	ENSMPUG00000012416	SURF6	94	64.481	Mustela_putorius_furo
MGP_SPRETEiJ_G0024242	Surf6	100	75.775	ENSNGAG00000015358	Surf6	100	76.056	Nannospalax_galili
MGP_SPRETEiJ_G0024242	Surf6	99	42.818	ENSNBRG00000007805	surf6	99	43.132	Neolamprologus_brichardi
MGP_SPRETEiJ_G0024242	Surf6	99	69.444	ENSNLEG00000013079	SURF6	99	69.444	Nomascus_leucogenys
MGP_SPRETEiJ_G0024242	Surf6	70	56.972	ENSMEUG00000006545	-	69	57.540	Notamacropus_eugenii
MGP_SPRETEiJ_G0024242	Surf6	50	79.213	ENSOPRG00000000430	-	100	72.687	Ochotona_princeps
MGP_SPRETEiJ_G0024242	Surf6	100	72.222	ENSODEG00000015789	SURF6	100	72.222	Octodon_degus
MGP_SPRETEiJ_G0024242	Surf6	98	47.778	ENSONIG00000011294	surf6	98	42.897	Oreochromis_niloticus
MGP_SPRETEiJ_G0024242	Surf6	99	45.225	ENSOANG00000011709	-	99	44.944	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0024242	Surf6	99	45.753	ENSORLG00000003980	surf6	86	41.436	Oryzias_latipes
MGP_SPRETEiJ_G0024242	Surf6	99	43.316	ENSORLG00020009339	surf6	86	41.436	Oryzias_latipes_hni
MGP_SPRETEiJ_G0024242	Surf6	99	45.479	ENSORLG00015016272	surf6	86	41.484	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0024242	Surf6	98	43.716	ENSOMEG00000011772	surf6	86	38.781	Oryzias_melastigma
MGP_SPRETEiJ_G0024242	Surf6	100	71.348	ENSOGAG00000027199	SURF6	100	71.629	Otolemur_garnettii
MGP_SPRETEiJ_G0024242	Surf6	91	54.489	ENSOARG00000003711	SURF6	99	53.704	Ovis_aries
MGP_SPRETEiJ_G0024242	Surf6	99	73.333	ENSPPAG00000032305	SURF6	99	73.333	Pan_paniscus
MGP_SPRETEiJ_G0024242	Surf6	100	68.451	ENSPPRG00000003090	SURF6	100	68.451	Panthera_pardus
MGP_SPRETEiJ_G0024242	Surf6	99	73.333	ENSPTRG00000021514	SURF6	99	73.333	Pan_troglodytes
MGP_SPRETEiJ_G0024242	Surf6	99	71.944	ENSPANG00000026036	SURF6	99	71.944	Papio_anubis
MGP_SPRETEiJ_G0024242	Surf6	99	44.384	ENSPKIG00000025080	surf6	90	44.110	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0024242	Surf6	99	52.235	ENSPSIG00000011771	SURF6	99	52.235	Pelodiscus_sinensis
MGP_SPRETEiJ_G0024242	Surf6	75	46.377	ENSPMGG00000004798	surf6	93	44.118	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0024242	Surf6	100	85.070	ENSPEMG00000012589	Surf6	100	85.070	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0024242	Surf6	99	56.044	ENSPCIG00000017358	SURF6	99	60.335	Phascolarctos_cinereus
MGP_SPRETEiJ_G0024242	Surf6	99	48.056	ENSPLAG00000021874	surf6	99	44.538	Poecilia_latipinna
MGP_SPRETEiJ_G0024242	Surf6	83	50.987	ENSPMEG00000009994	surf6	94	44.817	Poecilia_mexicana
MGP_SPRETEiJ_G0024242	Surf6	99	48.056	ENSPMEG00000009276	surf6	99	44.538	Poecilia_mexicana
MGP_SPRETEiJ_G0024242	Surf6	83	48.355	ENSPREG00000021969	surf6	92	44.186	Poecilia_reticulata
MGP_SPRETEiJ_G0024242	Surf6	99	72.222	ENSPPYG00000019728	SURF6	99	73.333	Pongo_abelii
MGP_SPRETEiJ_G0024242	Surf6	85	60.726	ENSPCAG00000002906	SURF6	99	61.056	Procavia_capensis
MGP_SPRETEiJ_G0024242	Surf6	100	72.145	ENSPCOG00000015707	SURF6	100	72.145	Propithecus_coquereli
MGP_SPRETEiJ_G0024242	Surf6	100	63.128	ENSPVAG00000017042	SURF6	100	63.128	Pteropus_vampyrus
MGP_SPRETEiJ_G0024242	Surf6	99	43.407	ENSPNYG00000003445	surf6	99	43.132	Pundamilia_nyererei
MGP_SPRETEiJ_G0024242	Surf6	69	49.412	ENSPNAG00000006939	surf6	69	48.627	Pygocentrus_nattereri
MGP_SPRETEiJ_G0024242	Surf6	100	88.451	ENSRNOG00000005031	Surf6	100	88.451	Rattus_norvegicus
MGP_SPRETEiJ_G0024242	Surf6	99	73.056	ENSRBIG00000028268	SURF6	99	73.333	Rhinopithecus_bieti
MGP_SPRETEiJ_G0024242	Surf6	99	73.056	ENSRROG00000012667	SURF6	99	73.333	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0024242	Surf6	100	62.570	ENSSBOG00000024264	-	100	64.246	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0024242	Surf6	100	58.840	ENSSHAG00000003742	SURF6	100	60.111	Sarcophilus_harrisii
MGP_SPRETEiJ_G0024242	Surf6	99	43.467	ENSSFOG00015016640	surf6	97	43.799	Scleropages_formosus
MGP_SPRETEiJ_G0024242	Surf6	99	47.238	ENSSMAG00000009846	surf6	99	44.475	Scophthalmus_maximus
MGP_SPRETEiJ_G0024242	Surf6	98	44.986	ENSSDUG00000007947	surf6	99	42.077	Seriola_dumerili
MGP_SPRETEiJ_G0024242	Surf6	99	46.070	ENSSLDG00000015027	surf6	99	41.304	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0024242	Surf6	99	49.451	ENSSPUG00000015954	SURF6	99	50.000	Sphenodon_punctatus
MGP_SPRETEiJ_G0024242	Surf6	99	44.324	ENSSPAG00000005916	surf6	99	41.989	Stegastes_partitus
MGP_SPRETEiJ_G0024242	Surf6	100	64.820	ENSSSCG00000032106	SURF6	100	65.374	Sus_scrofa
MGP_SPRETEiJ_G0024242	Surf6	99	49.730	ENSTGUG00000005438	-	100	49.180	Taeniopygia_guttata
MGP_SPRETEiJ_G0024242	Surf6	70	61.134	ENSTGUG00000005445	-	99	61.134	Taeniopygia_guttata
MGP_SPRETEiJ_G0024242	Surf6	99	46.260	ENSTRUG00000023872	surf6	99	41.389	Takifugu_rubripes
MGP_SPRETEiJ_G0024242	Surf6	99	45.479	ENSTNIG00000007503	surf6	99	45.152	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0024242	Surf6	100	67.213	ENSUAMG00000014627	SURF6	100	67.760	Ursus_americanus
MGP_SPRETEiJ_G0024242	Surf6	100	69.296	ENSVVUG00000027289	SURF6	100	69.296	Vulpes_vulpes
MGP_SPRETEiJ_G0024242	Surf6	99	43.296	ENSXETG00000005018	surf6	99	43.539	Xenopus_tropicalis
MGP_SPRETEiJ_G0024242	Surf6	99	46.537	ENSXCOG00000001322	surf6	99	42.577	Xiphophorus_couchianus
MGP_SPRETEiJ_G0024242	Surf6	99	47.778	ENSXMAG00000024608	surf6	99	42.416	Xiphophorus_maculatus