EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0024249 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 10357 bases
Position: chr2:24855308-24865664
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0052489	RNase_T	PF00929.24	8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0052491	-	737	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0052490	-	591	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0052493	-	360	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0052492	-	575	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0052488	-	2162	-	MGP_SPRETEiJ_P0052488	409 (aa)	-	-
MGP_SPRETEiJ_T0052489	-	1066	-	MGP_SPRETEiJ_P0052489	345 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0024249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0024249's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0024249	-	96	71.322	ENSG00000148300	REXO4	94	71.322	Homo_sapiens
MGP_SPRETEiJ_G0024249	-	83	51.429	ENSAPOG00000019264	rexo4	81	51.429	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0024249	-	91	66.579	ENSAMEG00000011649	REXO4	89	67.385	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0024249	-	83	51.714	ENSAOCG00000004087	rexo4	81	51.714	Amphiprion_ocellaris
MGP_SPRETEiJ_G0024249	-	83	51.429	ENSAPEG00000009106	rexo4	81	51.429	Amphiprion_percula
MGP_SPRETEiJ_G0024249	-	84	50.712	ENSATEG00000017662	rexo4	81	50.712	Anabas_testudineus
MGP_SPRETEiJ_G0024249	-	82	53.936	ENSAPLG00000005865	REXO4	99	53.936	Anas_platyrhynchos
MGP_SPRETEiJ_G0024249	-	98	67.402	ENSANAG00000028404	REXO4	96	68.704	Aotus_nancymaae
MGP_SPRETEiJ_G0024249	-	85	52.747	ENSACLG00000006007	rexo4	83	52.747	Astatotilapia_calliptera
MGP_SPRETEiJ_G0024249	-	83	50.704	ENSAMXG00000013291	rexo4	80	52.958	Astyanax_mexicanus
MGP_SPRETEiJ_G0024249	-	89	65.229	ENSBTAG00000019721	REXO4	88	64.690	Bos_taurus
MGP_SPRETEiJ_G0024249	-	98	67.237	ENSCJAG00000009774	REXO4	96	68.215	Callithrix_jacchus
MGP_SPRETEiJ_G0024249	-	94	67.342	ENSCAFG00000019767	REXO4	91	68.883	Canis_familiaris
MGP_SPRETEiJ_G0024249	-	96	67.742	ENSCAFG00020000983	-	88	69.681	Canis_lupus_dingo
MGP_SPRETEiJ_G0024249	-	91	64.380	ENSCHIG00000009517	REXO4	88	65.499	Capra_hircus
MGP_SPRETEiJ_G0024249	-	89	72.329	ENSTSYG00000027492	REXO4	87	72.329	Carlito_syrichta
MGP_SPRETEiJ_G0024249	-	84	70.058	ENSCAPG00000014583	REXO4	100	69.186	Cavia_aperea
MGP_SPRETEiJ_G0024249	-	97	66.427	ENSCPOG00000001386	REXO4	89	66.582	Cavia_porcellus
MGP_SPRETEiJ_G0024249	-	99	68.000	ENSCCAG00000027049	REXO4	93	64.500	Cebus_capucinus
MGP_SPRETEiJ_G0024249	-	99	69.007	ENSCATG00000028646	REXO4	89	71.129	Cercocebus_atys
MGP_SPRETEiJ_G0024249	-	80	70.909	ENSCLAG00000006919	REXO4	100	70.303	Chinchilla_lanigera
MGP_SPRETEiJ_G0024249	-	96	70.324	ENSCSAG00000015280	REXO4	94	70.324	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0024249	-	95	52.346	ENSCPBG00000021152	REXO4	85	56.180	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0024249	-	51	57.143	ENSCING00000010751	-	95	49.612	Ciona_intestinalis
MGP_SPRETEiJ_G0024249	-	96	70.075	ENSCANG00000029855	REXO4	94	70.075	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0024249	-	99	82.843	ENSCGRG00001013126	Rexo4	96	82.843	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0024249	-	99	82.843	ENSCGRG00000009819	Rexo4	99	82.843	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0024249	-	83	51.014	ENSCSEG00000019343	rexo4	80	51.014	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0024249	-	51	64.953	ENSCVAG00000014963	rexo4	58	64.953	Cyprinodon_variegatus
MGP_SPRETEiJ_G0024249	-	54	63.877	ENSDARG00000088619	rexo4	84	63.877	Danio_rerio
MGP_SPRETEiJ_G0024249	-	99	88.889	ENSDNOG00000002429	REXO4	65	88.889	Dasypus_novemcinctus
MGP_SPRETEiJ_G0024249	-	81	72.619	ENSDORG00000006190	Rexo4	99	72.619	Dipodomys_ordii
MGP_SPRETEiJ_G0024249	-	69	67.364	ENSEASG00005009915	-	79	67.355	Equus_asinus_asinus
MGP_SPRETEiJ_G0024249	-	91	70.241	ENSECAG00000007896	REXO4	81	70.765	Equus_caballus
MGP_SPRETEiJ_G0024249	-	89	48.232	ENSELUG00000003539	rexo4	88	47.870	Esox_lucius
MGP_SPRETEiJ_G0024249	-	90	68.108	ENSFCAG00000011652	REXO4	84	68.767	Felis_catus
MGP_SPRETEiJ_G0024249	-	87	54.787	ENSFALG00000001520	REXO4	90	54.474	Ficedula_albicollis
MGP_SPRETEiJ_G0024249	-	98	72.772	ENSFDAG00000016050	REXO4	89	74.400	Fukomys_damarensis
MGP_SPRETEiJ_G0024249	-	90	50.135	ENSFHEG00000002413	rexo4	83	52.011	Fundulus_heteroclitus
MGP_SPRETEiJ_G0024249	-	53	58.182	ENSGMOG00000012876	rexo4	66	58.182	Gadus_morhua
MGP_SPRETEiJ_G0024249	-	79	45.878	ENSGAFG00000015404	-	83	46.786	Gambusia_affinis
MGP_SPRETEiJ_G0024249	-	83	53.198	ENSGACG00000008065	rexo4	79	52.770	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0024249	-	84	57.020	ENSGAGG00000010260	REXO4	84	57.020	Gopherus_agassizii
MGP_SPRETEiJ_G0024249	-	96	71.072	ENSGGOG00000014508	REXO4	94	71.072	Gorilla_gorilla
MGP_SPRETEiJ_G0024249	-	85	52.473	ENSHBUG00000000542	rexo4	83	52.473	Haplochromis_burtoni
MGP_SPRETEiJ_G0024249	-	99	69.082	ENSHGLG00000016901	REXO4	99	69.324	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0024249	-	99	69.082	ENSHGLG00100017444	REXO4	99	69.324	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0024249	-	53	61.086	ENSHCOG00000018196	rexo4	58	61.086	Hippocampus_comes
MGP_SPRETEiJ_G0024249	-	83	48.870	ENSIPUG00000021084	rexo4	80	48.451	Ictalurus_punctatus
MGP_SPRETEiJ_G0024249	-	95	72.774	ENSSTOG00000003754	REXO4	90	72.222	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0024249	-	98	74.568	ENSJJAG00000013002	Rexo4	85	77.174	Jaculus_jaculus
MGP_SPRETEiJ_G0024249	-	83	50.578	ENSKMAG00000015039	rexo4	81	50.578	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0024249	-	83	51.143	ENSLBEG00000025570	rexo4	80	51.143	Labrus_bergylta
MGP_SPRETEiJ_G0024249	-	85	52.066	ENSLACG00000012399	REXO4	83	52.066	Latimeria_chalumnae
MGP_SPRETEiJ_G0024249	-	88	51.187	ENSLOCG00000003577	rexo4	83	50.781	Lepisosteus_oculatus
MGP_SPRETEiJ_G0024249	-	99	60.671	ENSLAFG00000011274	REXO4	92	63.351	Loxodonta_africana
MGP_SPRETEiJ_G0024249	-	98	69.438	ENSMFAG00000042425	REXO4	96	69.438	Macaca_fascicularis
MGP_SPRETEiJ_G0024249	-	96	70.324	ENSMMUG00000000935	REXO4	94	70.324	Macaca_mulatta
MGP_SPRETEiJ_G0024249	-	96	69.825	ENSMNEG00000031604	REXO4	94	69.825	Macaca_nemestrina
MGP_SPRETEiJ_G0024249	-	96	70.324	ENSMLEG00000037716	REXO4	94	70.324	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0024249	-	84	51.705	ENSMAMG00000011251	rexo4	83	50.980	Mastacembelus_armatus
MGP_SPRETEiJ_G0024249	-	85	51.934	ENSMZEG00005012336	rexo4	83	51.934	Maylandia_zebra
MGP_SPRETEiJ_G0024249	-	84	55.313	ENSMGAG00000006521	REXO4	99	55.313	Meleagris_gallopavo
MGP_SPRETEiJ_G0024249	-	99	84.314	ENSMAUG00000015137	Rexo4	96	84.314	Mesocricetus_auratus
MGP_SPRETEiJ_G0024249	-	98	66.422	ENSMICG00000008422	REXO4	90	67.895	Microcebus_murinus
MGP_SPRETEiJ_G0024249	-	98	85.075	ENSMOCG00000020607	Rexo4	93	85.075	Microtus_ochrogaster
MGP_SPRETEiJ_G0024249	-	86	59.178	ENSMODG00000012817	REXO4	84	59.178	Monodelphis_domestica
MGP_SPRETEiJ_G0024249	-	85	52.722	ENSMALG00000019705	rexo4	82	52.571	Monopterus_albus
MGP_SPRETEiJ_G0024249	-	100	98.261	MGP_CAROLIEiJ_G0023332	-	100	98.261	Mus_caroli
MGP_SPRETEiJ_G0024249	-	100	98.551	ENSMUSG00000052406	Rexo4	100	98.289	Mus_musculus
MGP_SPRETEiJ_G0024249	-	99	92.822	MGP_PahariEiJ_G0024789	Rexo4	99	92.822	Mus_pahari
MGP_SPRETEiJ_G0024249	-	82	66.667	ENSMPUG00000012315	REXO4	96	66.667	Mustela_putorius_furo
MGP_SPRETEiJ_G0024249	-	99	72.840	ENSNGAG00000010700	Rexo4	99	72.840	Nannospalax_galili
MGP_SPRETEiJ_G0024249	-	87	51.622	ENSNBRG00000011712	rexo4	85	51.622	Neolamprologus_brichardi
MGP_SPRETEiJ_G0024249	-	96	64.824	ENSNLEG00000007556	-	85	69.653	Nomascus_leucogenys
MGP_SPRETEiJ_G0024249	-	96	69.652	ENSNLEG00000013130	-	94	69.652	Nomascus_leucogenys
MGP_SPRETEiJ_G0024249	-	78	84.000	ENSMEUG00000006513	-	66	84.000	Notamacropus_eugenii
MGP_SPRETEiJ_G0024249	-	84	64.162	ENSODEG00000015721	REXO4	100	64.162	Octodon_degus
MGP_SPRETEiJ_G0024249	-	85	53.315	ENSONIG00000020052	rexo4	83	53.315	Oreochromis_niloticus
MGP_SPRETEiJ_G0024249	-	85	55.556	ENSOANG00000002453	REXO4	93	55.556	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0024249	-	85	53.803	ENSORLG00000006904	rexo4	82	53.803	Oryzias_latipes
MGP_SPRETEiJ_G0024249	-	85	51.667	ENSORLG00020013768	rexo4	82	51.667	Oryzias_latipes_hni
MGP_SPRETEiJ_G0024249	-	85	51.389	ENSORLG00015012070	rexo4	82	51.389	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0024249	-	85	51.705	ENSOMEG00000018327	rexo4	81	51.705	Oryzias_melastigma
MGP_SPRETEiJ_G0024249	-	97	67.500	ENSOGAG00000014040	REXO4	87	72.022	Otolemur_garnettii
MGP_SPRETEiJ_G0024249	-	96	71.322	ENSPPAG00000027911	REXO4	94	71.322	Pan_paniscus
MGP_SPRETEiJ_G0024249	-	96	66.751	ENSPPRG00000002894	REXO4	89	68.478	Panthera_pardus
MGP_SPRETEiJ_G0024249	-	93	58.656	ENSPTIG00000012007	REXO4	87	60.000	Panthera_tigris_altaica
MGP_SPRETEiJ_G0024249	-	96	71.322	ENSPTRG00000023363	REXO4	94	71.322	Pan_troglodytes
MGP_SPRETEiJ_G0024249	-	96	70.574	ENSPANG00000026040	REXO4	94	70.574	Papio_anubis
MGP_SPRETEiJ_G0024249	-	84	52.408	ENSPKIG00000024761	rexo4	81	52.408	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0024249	-	84	59.437	ENSPSIG00000016908	REXO4	84	59.437	Pelodiscus_sinensis
MGP_SPRETEiJ_G0024249	-	85	47.849	ENSPMGG00000005312	rexo4	82	47.849	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0024249	-	99	86.139	ENSPEMG00000017982	Rexo4	99	86.139	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0024249	-	95	55.970	ENSPCIG00000017379	REXO4	85	57.650	Phascolarctos_cinereus
MGP_SPRETEiJ_G0024249	-	85	49.858	ENSPFOG00000017751	rexo4	83	50.142	Poecilia_formosa
MGP_SPRETEiJ_G0024249	-	85	50.716	ENSPLAG00000010487	rexo4	83	50.571	Poecilia_latipinna
MGP_SPRETEiJ_G0024249	-	85	50.571	ENSPMEG00000020767	rexo4	83	50.142	Poecilia_mexicana
MGP_SPRETEiJ_G0024249	-	85	50.000	ENSPREG00000021841	rexo4	83	49.857	Poecilia_reticulata
MGP_SPRETEiJ_G0024249	-	97	70.370	ENSPPYG00000019735	REXO4	95	70.370	Pongo_abelii
MGP_SPRETEiJ_G0024249	-	86	62.778	ENSPCAG00000010581	REXO4	85	63.056	Procavia_capensis
MGP_SPRETEiJ_G0024249	-	91	69.600	ENSPCOG00000025466	REXO4	88	70.190	Propithecus_coquereli
MGP_SPRETEiJ_G0024249	-	95	59.796	ENSPVAG00000001429	REXO4	86	61.496	Pteropus_vampyrus
MGP_SPRETEiJ_G0024249	-	85	52.198	ENSPNYG00000013712	rexo4	83	52.198	Pundamilia_nyererei
MGP_SPRETEiJ_G0024249	-	84	48.209	ENSPNAG00000019227	rexo4	79	48.468	Pygocentrus_nattereri
MGP_SPRETEiJ_G0024249	-	99	85.926	ENSRNOG00000027867	Rexo4	99	85.926	Rattus_norvegicus
MGP_SPRETEiJ_G0024249	-	97	69.630	ENSRBIG00000037515	REXO4	95	68.460	Rhinopithecus_bieti
MGP_SPRETEiJ_G0024249	-	97	69.383	ENSRROG00000028864	REXO4	95	68.215	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0024249	-	91	65.231	ENSSBOG00000032587	REXO4	97	56.731	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0024249	-	83	59.659	ENSSHAG00000005827	REXO4	90	58.583	Sarcophilus_harrisii
MGP_SPRETEiJ_G0024249	-	52	72.685	ENSSFOG00015017394	rexo4	84	56.869	Scleropages_formosus
MGP_SPRETEiJ_G0024249	-	84	51.156	ENSSMAG00000015441	rexo4	80	51.156	Scophthalmus_maximus
MGP_SPRETEiJ_G0024249	-	84	50.413	ENSSDUG00000023346	rexo4	80	50.413	Seriola_dumerili
MGP_SPRETEiJ_G0024249	-	84	51.989	ENSSLDG00000011085	rexo4	81	51.989	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0024249	-	86	52.304	ENSSPUG00000015868	REXO4	85	52.446	Sphenodon_punctatus
MGP_SPRETEiJ_G0024249	-	83	51.862	ENSSPAG00000007221	rexo4	81	51.862	Stegastes_partitus
MGP_SPRETEiJ_G0024249	-	97	63.145	ENSSSCG00000023173	REXO4	89	64.116	Sus_scrofa
MGP_SPRETEiJ_G0024249	-	88	52.688	ENSTGUG00000005537	REXO4	93	52.660	Taeniopygia_guttata
MGP_SPRETEiJ_G0024249	-	83	52.260	ENSTRUG00000013225	rexo4	86	51.247	Takifugu_rubripes
MGP_SPRETEiJ_G0024249	-	85	52.137	ENSTNIG00000005873	rexo4	97	52.137	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0024249	-	67	82.456	ENSTTRG00000007681	-	98	58.235	Tursiops_truncatus
MGP_SPRETEiJ_G0024249	-	91	68.338	ENSUAMG00000018676	REXO4	87	69.189	Ursus_americanus
MGP_SPRETEiJ_G0024249	-	86	63.380	ENSUMAG00000023164	REXO4	96	63.380	Ursus_maritimus
MGP_SPRETEiJ_G0024249	-	96	67.079	ENSVVUG00000027337	REXO4	88	69.415	Vulpes_vulpes
MGP_SPRETEiJ_G0024249	-	79	48.375	ENSXETG00000023096	rexo4	83	51.325	Xenopus_tropicalis
MGP_SPRETEiJ_G0024249	-	85	49.292	ENSXMAG00000013686	rexo4	86	49.575	Xiphophorus_maculatus