EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0024405 (Gene tree)
Gene ID: -
Gene Symbol: Rbm18
Alias: 2010004P11Rik
Full Name: RNA binding motif protein 18
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 19606 bases
Position: chr2:34551772-34571377
Accession: 1915139
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0053507	RRM_1	PF00076.22	6.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0053507	-	2417	-	MGP_SPRETEiJ_P0053507	190 (aa)	-	UPI0000022A3C
MGP_SPRETEiJ_T0053508	-	1000	-	MGP_SPRETEiJ_P0053508	85 (aa)	-	UPI00064548DE
MGP_SPRETEiJ_T0053509	-	714	-	MGP_SPRETEiJ_P0053509	77 (aa)	-	UPI000164C494
MGP_SPRETEiJ_T0053510	-	3458	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0024405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0024405's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSG00000119446	RBM18	100	98.947	Homo_sapiens
MGP_SPRETEiJ_G0024405	Rbm18	92	67.778	ENSAPOG00000001987	rbm18	90	67.778	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSAMEG00000000772	RBM18	100	98.421	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0024405	Rbm18	93	63.351	ENSACIG00000005001	rbm18	96	65.445	Amphilophus_citrinellus
MGP_SPRETEiJ_G0024405	Rbm18	92	67.222	ENSAOCG00000006762	rbm18	89	67.222	Amphiprion_ocellaris
MGP_SPRETEiJ_G0024405	Rbm18	92	67.778	ENSAPEG00000007972	rbm18	91	67.778	Amphiprion_percula
MGP_SPRETEiJ_G0024405	Rbm18	92	68.571	ENSATEG00000019164	rbm18	89	68.333	Anabas_testudineus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSANAG00000035441	RBM18	100	98.947	Aotus_nancymaae
MGP_SPRETEiJ_G0024405	Rbm18	96	67.760	ENSACLG00000019848	rbm18	92	67.760	Astatotilapia_calliptera
MGP_SPRETEiJ_G0024405	Rbm18	95	71.739	ENSAMXG00000035574	rbm18	96	71.739	Astyanax_mexicanus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSBTAG00000016367	RBM18	100	98.421	Bos_taurus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSCJAG00000046355	RBM18	100	98.947	Callithrix_jacchus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSCAFG00000030041	RBM18	100	98.421	Canis_familiaris
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSCAFG00020015174	RBM18	100	98.421	Canis_lupus_dingo
MGP_SPRETEiJ_G0024405	Rbm18	100	97.895	ENSCHIG00000026444	RBM18	100	97.895	Capra_hircus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSTSYG00000030353	RBM18	100	98.947	Carlito_syrichta
MGP_SPRETEiJ_G0024405	Rbm18	100	97.895	ENSCPOG00000038004	RBM18	100	97.895	Cavia_porcellus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSCCAG00000035467	RBM18	100	98.947	Cebus_capucinus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSCATG00000035634	RBM18	100	98.947	Cercocebus_atys
MGP_SPRETEiJ_G0024405	Rbm18	100	97.368	ENSCLAG00000010773	RBM18	100	97.368	Chinchilla_lanigera
MGP_SPRETEiJ_G0024405	Rbm18	88	91.176	ENSCSAG00000013373	RBM18	94	98.540	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0024405	Rbm18	80	95.395	ENSCHOG00000001341	RBM18	100	95.395	Choloepus_hoffmanni
MGP_SPRETEiJ_G0024405	Rbm18	100	94.211	ENSCPBG00000009885	RBM18	98	94.211	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0024405	Rbm18	99	33.175	ENSCING00000010157	-	95	33.175	Ciona_intestinalis
MGP_SPRETEiJ_G0024405	Rbm18	55	38.053	ENSCSAVG00000000409	-	81	38.053	Ciona_savignyi
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSCANG00000029590	RBM18	100	98.421	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSCGRG00001014593	Rbm18	100	98.947	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0024405	Rbm18	100	92.105	ENSCGRG00000012247	Rbm18	100	92.105	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0024405	Rbm18	92	67.778	ENSCSEG00000017587	rbm18	89	67.778	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0024405	Rbm18	92	67.222	ENSCVAG00000012436	rbm18	78	67.222	Cyprinodon_variegatus
MGP_SPRETEiJ_G0024405	Rbm18	100	68.912	ENSDARG00000044255	rbm18	100	68.912	Danio_rerio
MGP_SPRETEiJ_G0024405	Rbm18	100	100.000	ENSDNOG00000031658	RBM18	100	100.000	Dasypus_novemcinctus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSDORG00000028540	Rbm18	100	98.947	Dipodomys_ordii
MGP_SPRETEiJ_G0024405	Rbm18	72	40.876	FBgn0030571	CG14414	66	40.714	Drosophila_melanogaster
MGP_SPRETEiJ_G0024405	Rbm18	100	83.158	ENSETEG00000009832	RBM18	100	83.158	Echinops_telfairi
MGP_SPRETEiJ_G0024405	Rbm18	92	58.101	ENSEBUG00000009127	rbm18	95	56.383	Eptatretus_burgeri
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSEASG00005021084	RBM18	100	98.421	Equus_asinus_asinus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSECAG00000024639	RBM18	100	98.421	Equus_caballus
MGP_SPRETEiJ_G0024405	Rbm18	100	83.684	ENSEEUG00000002828	RBM18	100	83.684	Erinaceus_europaeus
MGP_SPRETEiJ_G0024405	Rbm18	94	72.222	ENSELUG00000005876	rbm18	96	72.222	Esox_lucius
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSFCAG00000037774	RBM18	100	98.421	Felis_catus
MGP_SPRETEiJ_G0024405	Rbm18	80	96.711	ENSFALG00000001940	RBM18	96	96.711	Ficedula_albicollis
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSFDAG00000012679	RBM18	100	98.421	Fukomys_damarensis
MGP_SPRETEiJ_G0024405	Rbm18	92	67.222	ENSFHEG00000012457	rbm18	90	67.222	Fundulus_heteroclitus
MGP_SPRETEiJ_G0024405	Rbm18	95	60.638	ENSGMOG00000019735	rbm18	93	60.638	Gadus_morhua
MGP_SPRETEiJ_G0024405	Rbm18	100	93.158	ENSGALG00000028167	RBM18	100	93.158	Gallus_gallus
MGP_SPRETEiJ_G0024405	Rbm18	92	68.333	ENSGAFG00000007767	rbm18	89	68.333	Gambusia_affinis
MGP_SPRETEiJ_G0024405	Rbm18	92	65.556	ENSGACG00000017348	rbm18	91	65.556	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0024405	Rbm18	100	95.263	ENSGAGG00000018318	RBM18	98	95.263	Gopherus_agassizii
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSGGOG00000011052	RBM18	100	98.947	Gorilla_gorilla
MGP_SPRETEiJ_G0024405	Rbm18	96	67.033	ENSHBUG00000015237	rbm18	93	67.033	Haplochromis_burtoni
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSHGLG00000011073	RBM18	100	98.421	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSHGLG00100005536	RBM18	100	98.421	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0024405	Rbm18	100	80.526	ENSHGLG00100006247	-	100	80.526	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0024405	Rbm18	95	67.935	ENSHCOG00000003148	rbm18	93	67.935	Hippocampus_comes
MGP_SPRETEiJ_G0024405	Rbm18	100	67.876	ENSIPUG00000021512	rbm18	83	67.876	Ictalurus_punctatus
MGP_SPRETEiJ_G0024405	Rbm18	100	84.293	ENSSTOG00000032266	-	100	84.293	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSSTOG00000022388	-	100	98.947	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0024405	Rbm18	88	91.176	ENSJJAG00000009581	-	85	98.540	Jaculus_jaculus
MGP_SPRETEiJ_G0024405	Rbm18	100	95.789	ENSJJAG00000010974	-	100	95.789	Jaculus_jaculus
MGP_SPRETEiJ_G0024405	Rbm18	92	67.222	ENSKMAG00000010679	rbm18	77	67.222	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0024405	Rbm18	92	66.667	ENSLBEG00000023896	rbm18	90	66.667	Labrus_bergylta
MGP_SPRETEiJ_G0024405	Rbm18	88	82.353	ENSLACG00000009920	RBM18	99	86.861	Latimeria_chalumnae
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSLAFG00000012134	RBM18	100	98.421	Loxodonta_africana
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSMFAG00000000443	RBM18	100	98.947	Macaca_fascicularis
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSMMUG00000011455	RBM18	100	98.947	Macaca_mulatta
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSMNEG00000035374	RBM18	100	98.947	Macaca_nemestrina
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSMLEG00000043105	RBM18	100	98.947	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0024405	Rbm18	92	68.333	ENSMAMG00000009239	rbm18	89	68.333	Mastacembelus_armatus
MGP_SPRETEiJ_G0024405	Rbm18	92	68.333	ENSMZEG00005017921	rbm18	90	68.333	Maylandia_zebra
MGP_SPRETEiJ_G0024405	Rbm18	93	87.640	ENSMGAG00000016888	RBM18	100	87.640	Meleagris_gallopavo
MGP_SPRETEiJ_G0024405	Rbm18	100	99.474	ENSMAUG00000021365	Rbm18	100	99.474	Mesocricetus_auratus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSMICG00000046793	RBM18	100	98.421	Microcebus_murinus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSMOCG00000000613	Rbm18	100	98.421	Microtus_ochrogaster
MGP_SPRETEiJ_G0024405	Rbm18	95	63.784	ENSMMOG00000021319	rbm18	92	63.784	Mola_mola
MGP_SPRETEiJ_G0024405	Rbm18	80	97.368	ENSMODG00000019688	RBM18	100	97.368	Monodelphis_domestica
MGP_SPRETEiJ_G0024405	Rbm18	92	67.778	ENSMALG00000017766	rbm18	90	67.778	Monopterus_albus
MGP_SPRETEiJ_G0024405	Rbm18	100	100.000	MGP_CAROLIEiJ_G0023488	Rbm18	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0024405	Rbm18	100	100.000	ENSMUSG00000026889	Rbm18	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	MGP_PahariEiJ_G0024945	Rbm18	100	98.947	Mus_pahari
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSMPUG00000007246	RBM18	100	98.421	Mustela_putorius_furo
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSMLUG00000004794	-	100	98.421	Myotis_lucifugus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSMLUG00000013224	-	100	98.421	Myotis_lucifugus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSNGAG00000000041	Rbm18	100	98.947	Nannospalax_galili
MGP_SPRETEiJ_G0024405	Rbm18	92	68.889	ENSNBRG00000021128	rbm18	90	68.889	Neolamprologus_brichardi
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSNLEG00000017174	RBM18	100	98.947	Nomascus_leucogenys
MGP_SPRETEiJ_G0024405	Rbm18	99	82.011	ENSMEUG00000015704	RBM18	100	82.011	Notamacropus_eugenii
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSOPRG00000010381	RBM18	100	98.947	Ochotona_princeps
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSODEG00000002055	RBM18	100	98.421	Octodon_degus
MGP_SPRETEiJ_G0024405	Rbm18	92	68.333	ENSONIG00000003723	rbm18	90	68.333	Oreochromis_niloticus
MGP_SPRETEiJ_G0024405	Rbm18	100	96.842	ENSOANG00000008200	RBM18	100	96.842	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSOCUG00000008527	RBM18	100	98.421	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0024405	Rbm18	92	62.983	ENSORLG00000009962	rbm18	90	67.403	Oryzias_latipes
MGP_SPRETEiJ_G0024405	Rbm18	97	63.243	ENSORLG00020013452	rbm18	90	67.403	Oryzias_latipes_hni
MGP_SPRETEiJ_G0024405	Rbm18	94	63.351	ENSORLG00015001711	rbm18	95	65.969	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0024405	Rbm18	92	64.641	ENSOMEG00000001492	rbm18	90	67.956	Oryzias_melastigma
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSOGAG00000015104	RBM18	100	98.947	Otolemur_garnettii
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSOARG00000014228	RBM18	100	98.421	Ovis_aries
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSPPAG00000023355	RBM18	100	98.947	Pan_paniscus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSPPRG00000011360	RBM18	100	98.421	Panthera_pardus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSPTIG00000007126	RBM18	100	98.421	Panthera_tigris_altaica
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSPTRG00000021323	RBM18	100	98.947	Pan_troglodytes
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSPANG00000025845	RBM18	100	98.947	Papio_anubis
MGP_SPRETEiJ_G0024405	Rbm18	77	81.356	ENSPKIG00000005430	rbm18	77	75.912	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0024405	Rbm18	96	96.175	ENSPSIG00000013631	RBM18	96	96.175	Pelodiscus_sinensis
MGP_SPRETEiJ_G0024405	Rbm18	92	67.797	ENSPMGG00000023951	rbm18	90	67.797	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0024405	Rbm18	87	61.538	ENSPMAG00000000630	rbm18	100	61.538	Petromyzon_marinus
MGP_SPRETEiJ_G0024405	Rbm18	100	97.368	ENSPCIG00000025526	RBM18	100	97.368	Phascolarctos_cinereus
MGP_SPRETEiJ_G0024405	Rbm18	92	68.333	ENSPFOG00000019706	rbm18	89	68.333	Poecilia_formosa
MGP_SPRETEiJ_G0024405	Rbm18	92	68.333	ENSPLAG00000005571	rbm18	89	68.333	Poecilia_latipinna
MGP_SPRETEiJ_G0024405	Rbm18	92	68.333	ENSPMEG00000013977	rbm18	89	68.333	Poecilia_mexicana
MGP_SPRETEiJ_G0024405	Rbm18	92	68.333	ENSPREG00000009157	rbm18	89	68.333	Poecilia_reticulata
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSPPYG00000019569	RBM18	100	98.947	Pongo_abelii
MGP_SPRETEiJ_G0024405	Rbm18	88	91.176	ENSPCAG00000011245	RBM18	100	98.540	Procavia_capensis
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSPCOG00000024474	RBM18	100	98.947	Propithecus_coquereli
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSPVAG00000000863	RBM18	100	98.421	Pteropus_vampyrus
MGP_SPRETEiJ_G0024405	Rbm18	92	68.889	ENSPNYG00000012421	rbm18	90	68.889	Pundamilia_nyererei
MGP_SPRETEiJ_G0024405	Rbm18	95	71.739	ENSPNAG00000017660	rbm18	96	71.739	Pygocentrus_nattereri
MGP_SPRETEiJ_G0024405	Rbm18	100	97.895	ENSRNOG00000006763	Rbm18	100	97.895	Rattus_norvegicus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSRBIG00000040177	RBM18	100	98.421	Rhinopithecus_bieti
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSRROG00000031364	RBM18	100	98.421	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0024405	Rbm18	100	98.947	ENSSBOG00000024806	RBM18	100	98.947	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0024405	Rbm18	100	97.368	ENSSHAG00000012257	RBM18	100	97.368	Sarcophilus_harrisii
MGP_SPRETEiJ_G0024405	Rbm18	95	76.796	ENSSFOG00015001100	rbm18	97	76.796	Scleropages_formosus
MGP_SPRETEiJ_G0024405	Rbm18	92	67.222	ENSSMAG00000020138	rbm18	90	67.222	Scophthalmus_maximus
MGP_SPRETEiJ_G0024405	Rbm18	92	68.333	ENSSDUG00000016203	rbm18	87	68.333	Seriola_dumerili
MGP_SPRETEiJ_G0024405	Rbm18	92	68.333	ENSSLDG00000016329	rbm18	89	68.333	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0024405	Rbm18	80	94.079	ENSSPUG00000001601	RBM18	87	94.079	Sphenodon_punctatus
MGP_SPRETEiJ_G0024405	Rbm18	92	67.222	ENSSPAG00000005394	rbm18	89	67.222	Stegastes_partitus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSSSCG00000030089	RBM18	100	98.421	Sus_scrofa
MGP_SPRETEiJ_G0024405	Rbm18	80	96.053	ENSTGUG00000006802	RBM18	99	96.053	Taeniopygia_guttata
MGP_SPRETEiJ_G0024405	Rbm18	95	63.784	ENSTRUG00000005812	rbm18	92	63.784	Takifugu_rubripes
MGP_SPRETEiJ_G0024405	Rbm18	95	68.108	ENSTNIG00000009141	rbm18	95	68.108	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0024405	Rbm18	80	99.342	ENSTBEG00000016520	RBM18	100	99.342	Tupaia_belangeri
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSUAMG00000014431	RBM18	100	98.421	Ursus_americanus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSUMAG00000003445	RBM18	100	98.421	Ursus_maritimus
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSVPAG00000008618	RBM18	100	98.421	Vicugna_pacos
MGP_SPRETEiJ_G0024405	Rbm18	100	98.421	ENSVVUG00000009442	RBM18	100	98.421	Vulpes_vulpes
MGP_SPRETEiJ_G0024405	Rbm18	100	74.211	ENSXETG00000016328	rbm18	100	74.211	Xenopus_tropicalis
MGP_SPRETEiJ_G0024405	Rbm18	92	68.889	ENSXMAG00000003538	rbm18	90	68.889	Xiphophorus_maculatus