EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0024436 (Gene tree)
Gene ID: -
Gene Symbol: Rc3h2
Alias: 2900024N03Rik|9430019J22Rik|D930043C02Rik|Mnab|Rnf164
Full Name: ring finger and CCCH-type zinc finger domains 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 52558 bases
Position: chr2:35725574-35778131
Accession: 2442789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0053553	zf-CCCH	PF00642.24	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0053557	-	2244	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0053556	-	3094	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0053555	-	575	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0053554	-	5732	-	MGP_SPRETEiJ_P0053554	478 (aa)	-	-
MGP_SPRETEiJ_T0053553	-	8802	-	MGP_SPRETEiJ_P0053553	1187 (aa)	-	-
MGP_SPRETEiJ_T0053559	-	513	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0053558	-	2644	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0053560	-	3481	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0024436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0024436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0024436	Rc3h2	98	80.892	MGP_SPRETEiJ_G0015563	Rc3h1	92	54.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.536	ENSG00000056586	RC3H2	100	98.536	Homo_sapiens
MGP_SPRETEiJ_G0024436	Rc3h2	95	87.389	ENSAPOG00000002117	rc3h2	93	56.856	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.886	ENSAMEG00000006498	RC3H2	100	95.886	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0024436	Rc3h2	93	86.486	ENSACIG00000005206	rc3h2	97	84.934	Amphilophus_citrinellus
MGP_SPRETEiJ_G0024436	Rc3h2	92	87.755	ENSAOCG00000019780	-	93	87.755	Amphiprion_ocellaris
MGP_SPRETEiJ_G0024436	Rc3h2	92	87.783	ENSAOCG00000007724	rc3h2	96	87.783	Amphiprion_ocellaris
MGP_SPRETEiJ_G0024436	Rc3h2	95	87.168	ENSAPEG00000007757	rc3h2	93	57.031	Amphiprion_percula
MGP_SPRETEiJ_G0024436	Rc3h2	94	86.253	ENSATEG00000019414	rc3h2	91	56.664	Anabas_testudineus
MGP_SPRETEiJ_G0024436	Rc3h2	95	98.896	ENSAPLG00000013920	RC3H2	100	90.277	Anas_platyrhynchos
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.536	ENSANAG00000030862	RC3H2	100	98.536	Aotus_nancymaae
MGP_SPRETEiJ_G0024436	Rc3h2	99	82.077	ENSACLG00000023136	rc3h2	92	56.255	Astatotilapia_calliptera
MGP_SPRETEiJ_G0024436	Rc3h2	94	85.333	ENSAMXG00000006778	rc3h2	93	55.122	Astyanax_mexicanus
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.290	ENSBTAG00000023867	RC3H2	100	95.290	Bos_taurus
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.536	ENSCJAG00000020050	RC3H2	100	98.536	Callithrix_jacchus
MGP_SPRETEiJ_G0024436	Rc3h2	92	100.000	ENSCAFG00000032522	-	100	100.000	Canis_familiaris
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.326	ENSCAFG00020015288	RC3H2	100	98.326	Canis_lupus_dingo
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.206	ENSCHIG00000019319	RC3H2	100	95.206	Capra_hircus
MGP_SPRETEiJ_G0024436	Rc3h2	79	88.594	ENSCAPG00000017086	RC3H2	93	79.800	Cavia_aperea
MGP_SPRETEiJ_G0024436	Rc3h2	100	96.044	ENSCPOG00000008511	RC3H2	100	96.044	Cavia_porcellus
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.536	ENSCCAG00000001404	RC3H2	100	98.536	Cebus_capucinus
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.536	ENSCATG00000036655	RC3H2	100	98.536	Cercocebus_atys
MGP_SPRETEiJ_G0024436	Rc3h2	100	96.128	ENSCLAG00000013261	RC3H2	100	96.128	Chinchilla_lanigera
MGP_SPRETEiJ_G0024436	Rc3h2	89	95.386	ENSCSAG00000013416	RC3H2	100	95.386	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0024436	Rc3h2	95	98.896	ENSCPBG00000009811	RC3H2	100	89.765	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.536	ENSCANG00000043140	RC3H2	100	98.536	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0024436	Rc3h2	100	96.128	ENSCGRG00001010006	Rc3h2	100	95.370	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0024436	Rc3h2	95	99.779	ENSCGRG00000009255	Rc3h2	100	96.699	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0024436	Rc3h2	95	86.283	ENSCSEG00000017460	rc3h2	96	55.804	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0024436	Rc3h2	96	84.749	ENSCVAG00000012202	rc3h2	91	56.137	Cyprinodon_variegatus
MGP_SPRETEiJ_G0024436	Rc3h2	95	84.956	ENSDARG00000063050	rc3h2	96	54.753	Danio_rerio
MGP_SPRETEiJ_G0024436	Rc3h2	100	94.533	ENSDNOG00000014557	RC3H2	100	94.533	Dasypus_novemcinctus
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.623	ENSDORG00000006398	Rc3h2	100	95.623	Dipodomys_ordii
MGP_SPRETEiJ_G0024436	Rc3h2	100	92.935	ENSEASG00005020897	RC3H2	100	92.935	Equus_asinus_asinus
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.963	ENSECAG00000022176	RC3H2	100	95.963	Equus_caballus
MGP_SPRETEiJ_G0024436	Rc3h2	95	87.389	ENSELUG00000006105	rc3h2	93	57.298	Esox_lucius
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.879	ENSFCAG00000007375	RC3H2	100	95.879	Felis_catus
MGP_SPRETEiJ_G0024436	Rc3h2	95	98.675	ENSFALG00000002011	RC3H2	100	90.109	Ficedula_albicollis
MGP_SPRETEiJ_G0024436	Rc3h2	100	96.465	ENSFDAG00000012477	RC3H2	100	96.465	Fukomys_damarensis
MGP_SPRETEiJ_G0024436	Rc3h2	94	87.082	ENSFHEG00000012272	rc3h2	93	55.467	Fundulus_heteroclitus
MGP_SPRETEiJ_G0024436	Rc3h2	54	87.160	ENSGMOG00000016709	-	100	53.097	Gadus_morhua
MGP_SPRETEiJ_G0024436	Rc3h2	95	98.896	ENSGALG00000001253	RC3H2	100	90.277	Gallus_gallus
MGP_SPRETEiJ_G0024436	Rc3h2	95	86.062	ENSGAFG00000007679	rc3h2	96	55.605	Gambusia_affinis
MGP_SPRETEiJ_G0024436	Rc3h2	92	86.878	ENSGACG00000017369	rc3h2	100	86.878	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0024436	Rc3h2	95	99.117	ENSGAGG00000018295	RC3H2	100	89.858	Gopherus_agassizii
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.326	ENSGGOG00000017062	RC3H2	100	98.326	Gorilla_gorilla
MGP_SPRETEiJ_G0024436	Rc3h2	99	84.310	ENSHBUG00000003976	rc3h2	92	56.903	Haplochromis_burtoni
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.326	ENSHGLG00000012014	-	100	98.326	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0024436	Rc3h2	100	96.215	ENSHGLG00100018015	RC3H2	100	96.215	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0024436	Rc3h2	94	83.742	ENSHCOG00000003006	rc3h2	87	57.567	Hippocampus_comes
MGP_SPRETEiJ_G0024436	Rc3h2	95	83.407	ENSIPUG00000021433	rc3h2	96	53.321	Ictalurus_punctatus
MGP_SPRETEiJ_G0024436	Rc3h2	100	96.212	ENSSTOG00000010655	RC3H2	100	96.212	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.966	ENSJJAG00000022376	Rc3h2	100	95.966	Jaculus_jaculus
MGP_SPRETEiJ_G0024436	Rc3h2	95	85.841	ENSKMAG00000010936	rc3h2	91	56.486	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0024436	Rc3h2	95	93.598	ENSLOCG00000002894	rc3h2	94	61.942	Lepisosteus_oculatus
MGP_SPRETEiJ_G0024436	Rc3h2	95	99.558	ENSLAFG00000003521	RC3H2	100	94.449	Loxodonta_africana
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.536	ENSMFAG00000035621	RC3H2	100	100.000	Macaca_fascicularis
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.536	ENSMMUG00000021134	RC3H2	100	98.536	Macaca_mulatta
MGP_SPRETEiJ_G0024436	Rc3h2	100	96.234	ENSMNEG00000031599	RC3H2	100	96.234	Macaca_nemestrina
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.536	ENSMLEG00000033809	RC3H2	100	98.536	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0024436	Rc3h2	92	87.528	ENSMAMG00000009119	rc3h2	93	87.528	Mastacembelus_armatus
MGP_SPRETEiJ_G0024436	Rc3h2	99	84.310	ENSMZEG00005017019	rc3h2	92	56.903	Maylandia_zebra
MGP_SPRETEiJ_G0024436	Rc3h2	95	98.462	ENSMGAG00000007984	RC3H2	100	90.209	Meleagris_gallopavo
MGP_SPRETEiJ_G0024436	Rc3h2	95	84.768	ENSMAUG00000003117	Rc3h2	95	90.263	Mesocricetus_auratus
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.117	ENSMICG00000003227	RC3H2	100	98.117	Microcebus_murinus
MGP_SPRETEiJ_G0024436	Rc3h2	100	96.549	ENSMOCG00000009592	Rc3h2	100	96.549	Microtus_ochrogaster
MGP_SPRETEiJ_G0024436	Rc3h2	96	85.996	ENSMMOG00000021305	rc3h2	96	86.534	Mola_mola
MGP_SPRETEiJ_G0024436	Rc3h2	95	98.896	ENSMODG00000019725	RC3H2	79	92.692	Monodelphis_domestica
MGP_SPRETEiJ_G0024436	Rc3h2	92	86.364	ENSMALG00000017885	rc3h2	92	86.364	Monopterus_albus
MGP_SPRETEiJ_G0024436	Rc3h2	100	99.791	MGP_CAROLIEiJ_G0023516	Rc3h2	100	99.791	Mus_caroli
MGP_SPRETEiJ_G0024436	Rc3h2	100	99.791	ENSMUSG00000075376	Rc3h2	100	99.791	Mus_musculus
MGP_SPRETEiJ_G0024436	Rc3h2	100	99.791	MGP_PahariEiJ_G0024969	Rc3h2	100	99.791	Mus_pahari
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.711	ENSMPUG00000014141	RC3H2	100	95.711	Mustela_putorius_furo
MGP_SPRETEiJ_G0024436	Rc3h2	100	94.454	ENSMLUG00000013992	RC3H2	100	94.454	Myotis_lucifugus
MGP_SPRETEiJ_G0024436	Rc3h2	100	96.025	ENSNGAG00000009763	-	100	96.025	Nannospalax_galili
MGP_SPRETEiJ_G0024436	Rc3h2	99	84.310	ENSNBRG00000009276	rc3h2	92	56.637	Neolamprologus_brichardi
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.536	ENSNLEG00000017204	RC3H2	100	98.536	Nomascus_leucogenys
MGP_SPRETEiJ_G0024436	Rc3h2	63	99.209	ENSMEUG00000001299	-	64	99.209	Notamacropus_eugenii
MGP_SPRETEiJ_G0024436	Rc3h2	79	98.138	ENSOPRG00000000135	RC3H2	93	91.255	Ochotona_princeps
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.326	ENSODEG00000005918	-	100	98.326	Octodon_degus
MGP_SPRETEiJ_G0024436	Rc3h2	99	84.310	ENSONIG00000003945	rc3h2	100	59.021	Oreochromis_niloticus
MGP_SPRETEiJ_G0024436	Rc3h2	95	99.117	ENSOANG00000008194	RC3H2	100	92.222	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.791	ENSOCUG00000008804	RC3H2	100	95.791	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0024436	Rc3h2	94	87.361	ENSORLG00000010018	rc3h2	92	55.961	Oryzias_latipes
MGP_SPRETEiJ_G0024436	Rc3h2	94	87.361	ENSORLG00020013257	rc3h2	92	56.228	Oryzias_latipes_hni
MGP_SPRETEiJ_G0024436	Rc3h2	94	87.361	ENSORLG00015001525	rc3h2	92	56.139	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0024436	Rc3h2	94	87.361	ENSOMEG00000023540	rc3h2	93	56.476	Oryzias_melastigma
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.214	ENSOGAG00000010678	RC3H2	100	95.214	Otolemur_garnettii
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.130	ENSOARG00000013965	RC3H2	100	95.130	Ovis_aries
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.326	ENSPPAG00000036013	RC3H2	100	98.326	Pan_paniscus
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.802	ENSPPRG00000008698	RC3H2	100	95.802	Panthera_pardus
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.802	ENSPTIG00000014257	RC3H2	100	95.802	Panthera_tigris_altaica
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.326	ENSPTRG00000021339	RC3H2	100	98.326	Pan_troglodytes
MGP_SPRETEiJ_G0024436	Rc3h2	100	94.351	ENSPANG00000025840	RC3H2	100	94.351	Papio_anubis
MGP_SPRETEiJ_G0024436	Rc3h2	95	89.183	ENSPKIG00000021910	rc3h2	91	60.762	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0024436	Rc3h2	95	98.896	ENSPSIG00000005393	RC3H2	100	90.109	Pelodiscus_sinensis
MGP_SPRETEiJ_G0024436	Rc3h2	93	86.682	ENSPMGG00000023963	rc3h2	94	86.682	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0024436	Rc3h2	100	96.801	ENSPEMG00000023441	Rc3h2	100	96.801	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0024436	Rc3h2	95	99.117	ENSPCIG00000025559	RC3H2	100	92.295	Phascolarctos_cinereus
MGP_SPRETEiJ_G0024436	Rc3h2	95	86.283	ENSPFOG00000019699	rc3h2	100	58.252	Poecilia_formosa
MGP_SPRETEiJ_G0024436	Rc3h2	95	85.841	ENSPLAG00000005799	rc3h2	90	63.342	Poecilia_latipinna
MGP_SPRETEiJ_G0024436	Rc3h2	95	86.283	ENSPMEG00000014187	rc3h2	93	55.378	Poecilia_mexicana
MGP_SPRETEiJ_G0024436	Rc3h2	95	86.283	ENSPREG00000008979	rc3h2	92	55.200	Poecilia_reticulata
MGP_SPRETEiJ_G0024436	Rc3h2	87	87.747	ENSPCAG00000010154	RC3H2	86	87.747	Procavia_capensis
MGP_SPRETEiJ_G0024436	Rc3h2	99	82.077	ENSPNYG00000012063	rc3h2	92	56.255	Pundamilia_nyererei
MGP_SPRETEiJ_G0024436	Rc3h2	95	86.504	ENSPNAG00000017502	rc3h2	88	59.142	Pygocentrus_nattereri
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.736	ENSRNOG00000009196	Rc3h2	100	98.736	Rattus_norvegicus
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.536	ENSRBIG00000032579	RC3H2	100	98.536	Rhinopithecus_bieti
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.536	ENSRROG00000043784	RC3H2	100	98.536	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.326	ENSSBOG00000029100	RC3H2	100	98.326	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0024436	Rc3h2	95	99.117	ENSSHAG00000007498	RC3H2	100	91.973	Sarcophilus_harrisii
MGP_SPRETEiJ_G0024436	Rc3h2	92	90.023	ENSSFOG00015000964	rc3h2	91	90.023	Scleropages_formosus
MGP_SPRETEiJ_G0024436	Rc3h2	95	86.283	ENSSMAG00000020048	rc3h2	93	56.728	Scophthalmus_maximus
MGP_SPRETEiJ_G0024436	Rc3h2	95	87.168	ENSSDUG00000016022	rc3h2	93	57.093	Seriola_dumerili
MGP_SPRETEiJ_G0024436	Rc3h2	95	87.168	ENSSLDG00000016070	rc3h2	93	56.830	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0024436	Rc3h2	95	99.338	ENSSARG00000012329	RC3H2	100	93.787	Sorex_araneus
MGP_SPRETEiJ_G0024436	Rc3h2	95	97.788	ENSSPUG00000001457	RC3H2	100	87.207	Sphenodon_punctatus
MGP_SPRETEiJ_G0024436	Rc3h2	96	86.304	ENSSPAG00000005233	rc3h2	93	56.545	Stegastes_partitus
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.326	ENSSSCG00000005575	RC3H2	98	98.326	Sus_scrofa
MGP_SPRETEiJ_G0024436	Rc3h2	95	98.896	ENSTGUG00000006889	-	100	90.277	Taeniopygia_guttata
MGP_SPRETEiJ_G0024436	Rc3h2	92	86.199	ENSTRUG00000003364	rc3h2	100	86.199	Takifugu_rubripes
MGP_SPRETEiJ_G0024436	Rc3h2	96	83.080	ENSTNIG00000004942	rc3h2	100	58.977	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0024436	Rc3h2	95	98.013	ENSTBEG00000009622	RC3H2	86	100.000	Tupaia_belangeri
MGP_SPRETEiJ_G0024436	Rc3h2	95	98.896	ENSTTRG00000016954	RC3H2	94	96.804	Tursiops_truncatus
MGP_SPRETEiJ_G0024436	Rc3h2	100	96.131	ENSUAMG00000015355	RC3H2	100	96.131	Ursus_americanus
MGP_SPRETEiJ_G0024436	Rc3h2	100	98.536	ENSUMAG00000003161	RC3H2	100	98.536	Ursus_maritimus
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.298	ENSVPAG00000005994	RC3H2	100	95.298	Vicugna_pacos
MGP_SPRETEiJ_G0024436	Rc3h2	100	95.542	ENSVVUG00000009519	RC3H2	100	95.542	Vulpes_vulpes
MGP_SPRETEiJ_G0024436	Rc3h2	94	86.414	ENSXCOG00000005002	rc3h2	99	84.165	Xiphophorus_couchianus
MGP_SPRETEiJ_G0024436	Rc3h2	94	86.860	ENSXMAG00000001724	rc3h2	91	55.925	Xiphophorus_maculatus