EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025046 (Gene tree)
Gene ID: -
Gene Symbol: Rpusd2
Alias: 4921503C21Rik|BB231107
Full Name: RNA pseudouridylate synthase domain containing 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 4975 bases
Position: chr2:119384364-119389338
Accession: 1918066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0055899	PseudoU_synth_2	PF00849.22	2.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0055899	-	2693	-	MGP_SPRETEiJ_P0055899	550 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.439	ENSG00000166133	RPUSD2	100	76.439	Homo_sapiens
MGP_SPRETEiJ_G0025046	Rpusd2	79	58.009	ENSAPOG00000000817	rpusd2	90	54.080	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025046	Rpusd2	100	77.477	ENSAMEG00000016996	RPUSD2	100	77.477	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025046	Rpusd2	79	59.955	ENSACIG00000024029	rpusd2	91	59.259	Amphilophus_citrinellus
MGP_SPRETEiJ_G0025046	Rpusd2	78	56.769	ENSAOCG00000015237	rpusd2	90	52.964	Amphiprion_ocellaris
MGP_SPRETEiJ_G0025046	Rpusd2	78	56.332	ENSAPEG00000021763	rpusd2	90	52.581	Amphiprion_percula
MGP_SPRETEiJ_G0025046	Rpusd2	79	55.789	ENSATEG00000015242	rpusd2	86	53.592	Anabas_testudineus
MGP_SPRETEiJ_G0025046	Rpusd2	76	65.321	ENSAPLG00000004723	RPUSD2	100	65.116	Anas_platyrhynchos
MGP_SPRETEiJ_G0025046	Rpusd2	78	67.416	ENSACAG00000013893	RPUSD2	91	67.416	Anolis_carolinensis
MGP_SPRETEiJ_G0025046	Rpusd2	100	77.639	ENSANAG00000009691	RPUSD2	100	77.639	Aotus_nancymaae
MGP_SPRETEiJ_G0025046	Rpusd2	79	57.511	ENSACLG00000019531	rpusd2	83	56.936	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025046	Rpusd2	79	58.058	ENSAMXG00000013376	rpusd2	99	50.575	Astyanax_mexicanus
MGP_SPRETEiJ_G0025046	Rpusd2	96	78.759	ENSBTAG00000003193	RPUSD2	99	77.679	Bos_taurus
MGP_SPRETEiJ_G0025046	Rpusd2	72	36.111	WBGene00019498	K07E8.7	97	36.111	Caenorhabditis_elegans
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.744	ENSCJAG00000020841	RPUSD2	100	76.744	Callithrix_jacchus
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.937	ENSCAFG00000009165	RPUSD2	100	76.937	Canis_familiaris
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.937	ENSCAFG00020005849	RPUSD2	100	76.937	Canis_lupus_dingo
MGP_SPRETEiJ_G0025046	Rpusd2	99	76.744	ENSCHIG00000006152	RPUSD2	99	77.281	Capra_hircus
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.937	ENSTSYG00000012844	RPUSD2	100	76.937	Carlito_syrichta
MGP_SPRETEiJ_G0025046	Rpusd2	52	87.762	ENSCAPG00000006895	-	99	87.762	Cavia_aperea
MGP_SPRETEiJ_G0025046	Rpusd2	96	80.113	ENSCPOG00000013201	RPUSD2	96	80.113	Cavia_porcellus
MGP_SPRETEiJ_G0025046	Rpusd2	96	79.362	ENSCCAG00000024378	RPUSD2	96	79.362	Cebus_capucinus
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.619	ENSCATG00000043734	RPUSD2	100	76.619	Cercocebus_atys
MGP_SPRETEiJ_G0025046	Rpusd2	95	81.559	ENSCLAG00000011862	RPUSD2	95	81.559	Chinchilla_lanigera
MGP_SPRETEiJ_G0025046	Rpusd2	94	79.463	ENSCSAG00000007538	RPUSD2	100	79.693	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025046	Rpusd2	61	83.382	ENSCHOG00000004834	RPUSD2	63	83.965	Choloepus_hoffmanni
MGP_SPRETEiJ_G0025046	Rpusd2	86	61.840	ENSCPBG00000013419	RPUSD2	95	61.961	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.799	ENSCANG00000003659	RPUSD2	100	76.799	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025046	Rpusd2	100	87.545	ENSCGRG00001009839	Rpusd2	97	87.545	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025046	Rpusd2	100	87.545	ENSCGRG00000012348	Rpusd2	100	87.545	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025046	Rpusd2	83	56.250	ENSCSEG00000001953	rpusd2	83	56.250	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0025046	Rpusd2	79	60.626	ENSCVAG00000010848	rpusd2	88	57.374	Cyprinodon_variegatus
MGP_SPRETEiJ_G0025046	Rpusd2	79	57.918	ENSDARG00000060992	rpusd2	82	57.231	Danio_rerio
MGP_SPRETEiJ_G0025046	Rpusd2	100	75.993	ENSDNOG00000047745	RPUSD2	100	75.993	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025046	Rpusd2	78	86.775	ENSDORG00000009092	Rpusd2	100	86.775	Dipodomys_ordii
MGP_SPRETEiJ_G0025046	Rpusd2	76	48.055	FBgn0032256	RluA-2	78	48.055	Drosophila_melanogaster
MGP_SPRETEiJ_G0025046	Rpusd2	77	47.761	FBgn0051719	RluA-1	63	47.761	Drosophila_melanogaster
MGP_SPRETEiJ_G0025046	Rpusd2	100	72.793	ENSETEG00000008581	RPUSD2	100	72.793	Echinops_telfairi
MGP_SPRETEiJ_G0025046	Rpusd2	76	35.469	ENSEBUG00000012149	rpusd2	89	34.490	Eptatretus_burgeri
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.292	ENSEASG00005016463	RPUSD2	99	76.292	Equus_asinus_asinus
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.471	ENSECAG00000024178	RPUSD2	99	76.471	Equus_caballus
MGP_SPRETEiJ_G0025046	Rpusd2	96	67.167	ENSEEUG00000005132	RPUSD2	96	67.167	Erinaceus_europaeus
MGP_SPRETEiJ_G0025046	Rpusd2	81	58.599	ENSELUG00000016786	rpusd2	85	58.599	Esox_lucius
MGP_SPRETEiJ_G0025046	Rpusd2	95	79.550	ENSFCAG00000040796	RPUSD2	95	79.550	Felis_catus
MGP_SPRETEiJ_G0025046	Rpusd2	77	68.807	ENSFALG00000001122	RPUSD2	96	68.919	Ficedula_albicollis
MGP_SPRETEiJ_G0025046	Rpusd2	94	79.463	ENSFDAG00000003070	RPUSD2	100	79.463	Fukomys_damarensis
MGP_SPRETEiJ_G0025046	Rpusd2	81	58.388	ENSFHEG00000007518	rpusd2	83	58.388	Fundulus_heteroclitus
MGP_SPRETEiJ_G0025046	Rpusd2	79	59.556	ENSGMOG00000011014	rpusd2	99	57.526	Gadus_morhua
MGP_SPRETEiJ_G0025046	Rpusd2	86	63.454	ENSGALG00000041216	RPUSD2	100	63.454	Gallus_gallus
MGP_SPRETEiJ_G0025046	Rpusd2	82	58.824	ENSGAFG00000003390	rpusd2	82	58.824	Gambusia_affinis
MGP_SPRETEiJ_G0025046	Rpusd2	85	52.713	ENSGACG00000008656	rpusd2	98	52.713	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0025046	Rpusd2	84	65.180	ENSGAGG00000013098	RPUSD2	92	65.180	Gopherus_agassizii
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.259	ENSGGOG00000006684	RPUSD2	100	76.259	Gorilla_gorilla
MGP_SPRETEiJ_G0025046	Rpusd2	79	57.296	ENSHBUG00000023777	rpusd2	83	56.729	Haplochromis_burtoni
MGP_SPRETEiJ_G0025046	Rpusd2	100	78.040	ENSHGLG00000012765	RPUSD2	100	78.040	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025046	Rpusd2	100	78.040	ENSHGLG00100006653	RPUSD2	100	78.040	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025046	Rpusd2	81	57.322	ENSHCOG00000015587	rpusd2	81	57.322	Hippocampus_comes
MGP_SPRETEiJ_G0025046	Rpusd2	88	56.040	ENSIPUG00000021006	rpusd2	86	56.040	Ictalurus_punctatus
MGP_SPRETEiJ_G0025046	Rpusd2	100	78.237	ENSSTOG00000025619	RPUSD2	100	78.237	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025046	Rpusd2	100	79.024	ENSJJAG00000023160	Rpusd2	100	79.676	Jaculus_jaculus
MGP_SPRETEiJ_G0025046	Rpusd2	79	57.235	ENSKMAG00000006618	rpusd2	86	54.457	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0025046	Rpusd2	79	56.645	ENSLBEG00000021571	rpusd2	90	53.295	Labrus_bergylta
MGP_SPRETEiJ_G0025046	Rpusd2	78	64.693	ENSLACG00000017338	RPUSD2	100	64.693	Latimeria_chalumnae
MGP_SPRETEiJ_G0025046	Rpusd2	79	63.098	ENSLOCG00000014755	rpusd2	93	62.256	Lepisosteus_oculatus
MGP_SPRETEiJ_G0025046	Rpusd2	97	77.819	ENSLAFG00000015588	RPUSD2	98	77.819	Loxodonta_africana
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.799	ENSMFAG00000045062	RPUSD2	100	76.799	Macaca_fascicularis
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.978	ENSMMUG00000001483	RPUSD2	100	76.978	Macaca_mulatta
MGP_SPRETEiJ_G0025046	Rpusd2	100	67.500	ENSMNEG00000041429	RPUSD2	100	67.500	Macaca_nemestrina
MGP_SPRETEiJ_G0025046	Rpusd2	77	85.423	ENSMLEG00000036551	RPUSD2	100	85.423	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025046	Rpusd2	79	55.950	ENSMAMG00000001077	rpusd2	82	54.980	Mastacembelus_armatus
MGP_SPRETEiJ_G0025046	Rpusd2	79	57.511	ENSMZEG00005006947	rpusd2	91	56.936	Maylandia_zebra
MGP_SPRETEiJ_G0025046	Rpusd2	80	67.699	ENSMGAG00000003058	RPUSD2	98	67.699	Meleagris_gallopavo
MGP_SPRETEiJ_G0025046	Rpusd2	100	88.087	ENSMAUG00000020467	Rpusd2	100	88.087	Mesocricetus_auratus
MGP_SPRETEiJ_G0025046	Rpusd2	99	77.636	ENSMICG00000028637	RPUSD2	99	77.636	Microcebus_murinus
MGP_SPRETEiJ_G0025046	Rpusd2	100	85.432	ENSMOCG00000020061	Rpusd2	100	85.432	Microtus_ochrogaster
MGP_SPRETEiJ_G0025046	Rpusd2	79	58.705	ENSMMOG00000012020	rpusd2	89	54.688	Mola_mola
MGP_SPRETEiJ_G0025046	Rpusd2	86	74.066	ENSMODG00000000300	RPUSD2	88	74.066	Monodelphis_domestica
MGP_SPRETEiJ_G0025046	Rpusd2	79	55.696	ENSMALG00000010024	rpusd2	83	54.819	Monopterus_albus
MGP_SPRETEiJ_G0025046	Rpusd2	100	97.107	MGP_CAROLIEiJ_G0024130	Rpusd2	100	97.107	Mus_caroli
MGP_SPRETEiJ_G0025046	Rpusd2	100	98.553	ENSMUSG00000027324	Rpusd2	100	98.553	Mus_musculus
MGP_SPRETEiJ_G0025046	Rpusd2	100	95.298	MGP_PahariEiJ_G0025573	Rpusd2	100	95.298	Mus_pahari
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.964	ENSMPUG00000008517	RPUSD2	100	76.964	Mustela_putorius_furo
MGP_SPRETEiJ_G0025046	Rpusd2	94	78.517	ENSMLUG00000007971	RPUSD2	99	78.517	Myotis_lucifugus
MGP_SPRETEiJ_G0025046	Rpusd2	100	80.470	ENSNGAG00000014126	Rpusd2	100	80.470	Nannospalax_galili
MGP_SPRETEiJ_G0025046	Rpusd2	79	59.909	ENSNBRG00000010070	rpusd2	82	59.211	Neolamprologus_brichardi
MGP_SPRETEiJ_G0025046	Rpusd2	100	77.158	ENSNLEG00000035735	RPUSD2	100	77.158	Nomascus_leucogenys
MGP_SPRETEiJ_G0025046	Rpusd2	100	67.204	ENSMEUG00000008500	RPUSD2	100	67.204	Notamacropus_eugenii
MGP_SPRETEiJ_G0025046	Rpusd2	100	75.135	ENSOPRG00000014177	-	100	75.135	Ochotona_princeps
MGP_SPRETEiJ_G0025046	Rpusd2	99	79.566	ENSODEG00000017193	RPUSD2	99	79.566	Octodon_degus
MGP_SPRETEiJ_G0025046	Rpusd2	79	60.550	ENSONIG00000020102	rpusd2	91	59.823	Oreochromis_niloticus
MGP_SPRETEiJ_G0025046	Rpusd2	100	77.297	ENSOCUG00000015745	RPUSD2	97	77.297	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025046	Rpusd2	80	59.161	ENSORLG00000015516	rpusd2	83	59.161	Oryzias_latipes
MGP_SPRETEiJ_G0025046	Rpusd2	80	58.901	ENSORLG00020010533	rpusd2	83	58.901	Oryzias_latipes_hni
MGP_SPRETEiJ_G0025046	Rpusd2	80	58.901	ENSORLG00015009206	rpusd2	82	58.901	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0025046	Rpusd2	85	55.785	ENSOMEG00000007355	rpusd2	80	57.053	Oryzias_melastigma
MGP_SPRETEiJ_G0025046	Rpusd2	96	77.903	ENSOGAG00000004867	RPUSD2	100	77.903	Otolemur_garnettii
MGP_SPRETEiJ_G0025046	Rpusd2	99	74.464	ENSOARG00000020235	RPUSD2	99	75.763	Ovis_aries
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.978	ENSPPAG00000032874	RPUSD2	100	76.978	Pan_paniscus
MGP_SPRETEiJ_G0025046	Rpusd2	95	80.189	ENSPPRG00000010446	RPUSD2	95	80.189	Panthera_pardus
MGP_SPRETEiJ_G0025046	Rpusd2	95	80.189	ENSPTIG00000013316	RPUSD2	95	80.189	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.619	ENSPTRG00000006924	RPUSD2	100	76.619	Pan_troglodytes
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.259	ENSPANG00000019339	RPUSD2	100	76.259	Papio_anubis
MGP_SPRETEiJ_G0025046	Rpusd2	69	71.386	ENSPKIG00000023017	rpusd2	65	63.275	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025046	Rpusd2	61	65.230	ENSPSIG00000012680	RPUSD2	99	65.230	Pelodiscus_sinensis
MGP_SPRETEiJ_G0025046	Rpusd2	79	58.199	ENSPMGG00000018165	rpusd2	80	57.461	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025046	Rpusd2	99	86.438	ENSPEMG00000012878	Rpusd2	99	86.438	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025046	Rpusd2	84	75.107	ENSPCIG00000023199	RPUSD2	86	75.107	Phascolarctos_cinereus
MGP_SPRETEiJ_G0025046	Rpusd2	88	55.960	ENSPFOG00000006829	rpusd2	88	55.960	Poecilia_formosa
MGP_SPRETEiJ_G0025046	Rpusd2	87	56.212	ENSPLAG00000022914	rpusd2	99	56.212	Poecilia_latipinna
MGP_SPRETEiJ_G0025046	Rpusd2	91	55.294	ENSPMEG00000009835	rpusd2	99	56.212	Poecilia_mexicana
MGP_SPRETEiJ_G0025046	Rpusd2	88	56.478	ENSPREG00000016441	rpusd2	85	56.478	Poecilia_reticulata
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.619	ENSPPYG00000006355	RPUSD2	100	76.619	Pongo_abelii
MGP_SPRETEiJ_G0025046	Rpusd2	100	75.943	ENSPCOG00000028019	RPUSD2	100	75.943	Propithecus_coquereli
MGP_SPRETEiJ_G0025046	Rpusd2	100	75.943	ENSPVAG00000001837	RPUSD2	100	75.943	Pteropus_vampyrus
MGP_SPRETEiJ_G0025046	Rpusd2	79	59.770	ENSPNYG00000021507	rpusd2	90	59.071	Pundamilia_nyererei
MGP_SPRETEiJ_G0025046	Rpusd2	100	92.767	ENSRNOG00000046797	Rpusd2	100	92.767	Rattus_norvegicus
MGP_SPRETEiJ_G0025046	Rpusd2	100	92.767	ENSRNOG00000010528	LOC100911166	100	92.767	Rattus_norvegicus
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.978	ENSRBIG00000030813	RPUSD2	100	76.978	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.799	ENSRROG00000026664	RPUSD2	100	76.799	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025046	Rpusd2	50	46.853	YDL036C	-	61	46.853	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0025046	Rpusd2	53	47.973	YOL066C	RIB2	50	47.973	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0025046	Rpusd2	100	77.419	ENSSBOG00000035031	RPUSD2	100	77.957	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025046	Rpusd2	62	73.547	ENSSHAG00000015108	RPUSD2	91	73.547	Sarcophilus_harrisii
MGP_SPRETEiJ_G0025046	Rpusd2	69	70.517	ENSSFOG00015019057	rpusd2	62	65.840	Scleropages_formosus
MGP_SPRETEiJ_G0025046	Rpusd2	81	56.965	ENSSMAG00000000903	rpusd2	91	56.965	Scophthalmus_maximus
MGP_SPRETEiJ_G0025046	Rpusd2	79	56.667	ENSSDUG00000019139	rpusd2	91	52.813	Seriola_dumerili
MGP_SPRETEiJ_G0025046	Rpusd2	79	56.458	ENSSLDG00000005938	rpusd2	91	52.632	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025046	Rpusd2	86	81.535	ENSSARG00000002792	RPUSD2	88	81.535	Sorex_araneus
MGP_SPRETEiJ_G0025046	Rpusd2	83	62.241	ENSSPUG00000001206	RPUSD2	94	62.241	Sphenodon_punctatus
MGP_SPRETEiJ_G0025046	Rpusd2	79	56.197	ENSSPAG00000003578	rpusd2	83	55.670	Stegastes_partitus
MGP_SPRETEiJ_G0025046	Rpusd2	99	78.456	ENSSSCG00000036700	RPUSD2	99	78.456	Sus_scrofa
MGP_SPRETEiJ_G0025046	Rpusd2	78	55.579	ENSTRUG00000025880	rpusd2	90	55.324	Takifugu_rubripes
MGP_SPRETEiJ_G0025046	Rpusd2	79	58.559	ENSTNIG00000017329	rpusd2	91	57.987	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0025046	Rpusd2	100	68.649	ENSTBEG00000007933	RPUSD2	100	68.649	Tupaia_belangeri
MGP_SPRETEiJ_G0025046	Rpusd2	96	79.362	ENSTTRG00000010585	RPUSD2	96	79.362	Tursiops_truncatus
MGP_SPRETEiJ_G0025046	Rpusd2	94	80.230	ENSUAMG00000001470	RPUSD2	100	80.230	Ursus_americanus
MGP_SPRETEiJ_G0025046	Rpusd2	100	77.658	ENSUMAG00000012487	RPUSD2	88	77.658	Ursus_maritimus
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.165	ENSVPAG00000003844	RPUSD2	100	76.165	Vicugna_pacos
MGP_SPRETEiJ_G0025046	Rpusd2	100	76.937	ENSVVUG00000026590	RPUSD2	100	76.937	Vulpes_vulpes
MGP_SPRETEiJ_G0025046	Rpusd2	83	64.316	ENSXETG00000015973	rpusd2	100	64.316	Xenopus_tropicalis
MGP_SPRETEiJ_G0025046	Rpusd2	88	55.847	ENSXMAG00000021821	rpusd2	99	56.098	Xiphophorus_maculatus