EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025060 (Gene tree)
Gene ID: -
Gene Symbol: Ino80
Alias: 2310079N15Rik|4632409L19Rik|INO80|Inoc1
Full Name: INO80 complex subunit
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 110657 bases
Position: chr2:119744217-119854873
Accession: 1915392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0055951	ResIII	PF04851.15	1.7e-05	1	1
MGP_SPRETEiJ_P0055950	ResIII	PF04851.15	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0055952	-	406	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0055951	-	3896	-	MGP_SPRETEiJ_P0055951	1141 (aa)	-	UPI0000213439
MGP_SPRETEiJ_T0055950	-	6331	-	MGP_SPRETEiJ_P0055950	1559 (aa)	-	-
MGP_SPRETEiJ_T0055949	-	2314	-	MGP_SPRETEiJ_P0055949	733 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025060	Ino80	100	96.793	ENSG00000128908	INO80	100	98.256	Homo_sapiens
MGP_SPRETEiJ_G0025060	Ino80	99	70.609	ENSAPOG00000012586	ino80	99	70.332	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025060	Ino80	100	96.797	ENSAMEG00000016796	INO80	100	96.797	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025060	Ino80	99	71.130	ENSACIG00000001918	ino80	98	73.763	Amphilophus_citrinellus
MGP_SPRETEiJ_G0025060	Ino80	98	74.293	ENSAOCG00000000490	ino80	99	72.739	Amphiprion_ocellaris
MGP_SPRETEiJ_G0025060	Ino80	97	75.033	ENSAPEG00000022911	ino80	99	73.072	Amphiprion_percula
MGP_SPRETEiJ_G0025060	Ino80	99	73.245	ENSATEG00000001271	ino80	100	72.379	Anabas_testudineus
MGP_SPRETEiJ_G0025060	Ino80	100	90.006	ENSAPLG00000013656	INO80	100	90.006	Anas_platyrhynchos
MGP_SPRETEiJ_G0025060	Ino80	99	86.053	ENSACAG00000003531	INO80	99	88.020	Anolis_carolinensis
MGP_SPRETEiJ_G0025060	Ino80	100	96.472	ENSANAG00000032223	INO80	100	96.472	Aotus_nancymaae
MGP_SPRETEiJ_G0025060	Ino80	99	67.903	ENSACLG00000006610	ino80	99	71.391	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025060	Ino80	100	95.722	ENSBTAG00000010380	INO80	100	96.105	Bos_taurus
MGP_SPRETEiJ_G0025060	Ino80	100	96.472	ENSCJAG00000020770	-	100	96.472	Callithrix_jacchus
MGP_SPRETEiJ_G0025060	Ino80	100	96.859	ENSCAFG00000009492	INO80	100	96.859	Canis_familiaris
MGP_SPRETEiJ_G0025060	Ino80	96	96.360	ENSCAFG00020005524	-	99	96.360	Canis_lupus_dingo
MGP_SPRETEiJ_G0025060	Ino80	100	96.296	ENSCHIG00000010246	INO80	100	96.296	Capra_hircus
MGP_SPRETEiJ_G0025060	Ino80	100	96.985	ENSTSYG00000003252	INO80	100	96.985	Carlito_syrichta
MGP_SPRETEiJ_G0025060	Ino80	100	96.921	ENSCPOG00000011386	INO80	100	96.921	Cavia_porcellus
MGP_SPRETEiJ_G0025060	Ino80	100	96.151	ENSCCAG00000030680	INO80	100	96.151	Cebus_capucinus
MGP_SPRETEiJ_G0025060	Ino80	100	96.729	ENSCATG00000040663	INO80	100	96.729	Cercocebus_atys
MGP_SPRETEiJ_G0025060	Ino80	100	96.665	ENSCLAG00000008397	INO80	100	96.665	Chinchilla_lanigera
MGP_SPRETEiJ_G0025060	Ino80	100	96.793	ENSCSAG00000007632	INO80	100	96.793	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025060	Ino80	73	94.545	ENSCHOG00000011938	INO80	77	96.154	Choloepus_hoffmanni
MGP_SPRETEiJ_G0025060	Ino80	100	90.135	ENSCPBG00000013491	INO80	100	90.135	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025060	Ino80	100	89.801	ENSCANG00000036208	INO80	100	89.801	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025060	Ino80	100	98.525	ENSCGRG00001013566	Ino80	100	98.525	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025060	Ino80	100	98.525	ENSCGRG00000001290	Ino80	100	98.525	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025060	Ino80	91	71.846	ENSCSEG00000019370	ino80	94	74.549	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0025060	Ino80	97	74.017	ENSCVAG00000021470	ino80	100	72.379	Cyprinodon_variegatus
MGP_SPRETEiJ_G0025060	Ino80	97	75.754	ENSDARG00000070432	ino80	97	75.823	Danio_rerio
MGP_SPRETEiJ_G0025060	Ino80	100	96.729	ENSDNOG00000010267	INO80	100	96.729	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025060	Ino80	84	66.274	ENSEBUG00000001921	ino80	96	65.891	Eptatretus_burgeri
MGP_SPRETEiJ_G0025060	Ino80	100	96.477	ENSEASG00005016405	INO80	100	96.477	Equus_asinus_asinus
MGP_SPRETEiJ_G0025060	Ino80	99	71.166	ENSELUG00000001071	ino80	96	73.106	Esox_lucius
MGP_SPRETEiJ_G0025060	Ino80	100	96.925	ENSFCAG00000014722	INO80	100	96.925	Felis_catus
MGP_SPRETEiJ_G0025060	Ino80	100	89.045	ENSFALG00000006125	INO80	100	88.853	Ficedula_albicollis
MGP_SPRETEiJ_G0025060	Ino80	99	96.573	ENSFDAG00000005624	INO80	99	96.536	Fukomys_damarensis
MGP_SPRETEiJ_G0025060	Ino80	83	75.515	ENSFHEG00000020436	ino80	88	74.828	Fundulus_heteroclitus
MGP_SPRETEiJ_G0025060	Ino80	99	69.099	ENSGMOG00000006031	ino80	99	71.593	Gadus_morhua
MGP_SPRETEiJ_G0025060	Ino80	100	90.006	ENSGALG00000008553	INO80	100	90.006	Gallus_gallus
MGP_SPRETEiJ_G0025060	Ino80	97	74.304	ENSGAFG00000006358	ino80	98	74.785	Gambusia_affinis
MGP_SPRETEiJ_G0025060	Ino80	97	71.990	ENSGACG00000012960	ino80	99	70.019	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0025060	Ino80	99	89.552	ENSGAGG00000019203	INO80	99	90.940	Gopherus_agassizii
MGP_SPRETEiJ_G0025060	Ino80	95	75.033	ENSHBUG00000022614	ino80	99	74.702	Haplochromis_burtoni
MGP_SPRETEiJ_G0025060	Ino80	100	96.023	ENSHGLG00000018136	INO80	100	96.023	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025060	Ino80	100	95.382	ENSHGLG00100006571	INO80	100	95.061	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025060	Ino80	97	74.081	ENSHCOG00000002445	ino80	96	73.991	Hippocampus_comes
MGP_SPRETEiJ_G0025060	Ino80	99	71.602	ENSIPUG00000018905	ino80	97	74.222	Ictalurus_punctatus
MGP_SPRETEiJ_G0025060	Ino80	100	97.436	ENSSTOG00000000427	INO80	100	97.436	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025060	Ino80	99	93.140	ENSJJAG00000016166	Ino80	100	91.405	Jaculus_jaculus
MGP_SPRETEiJ_G0025060	Ino80	99	70.296	ENSKMAG00000019273	ino80	99	73.077	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0025060	Ino80	99	69.802	ENSLBEG00000024288	ino80	97	72.181	Labrus_bergylta
MGP_SPRETEiJ_G0025060	Ino80	98	73.817	ENSLACG00000008666	INO80	99	73.623	Latimeria_chalumnae
MGP_SPRETEiJ_G0025060	Ino80	100	77.941	ENSLOCG00000012304	ino80	100	77.558	Lepisosteus_oculatus
MGP_SPRETEiJ_G0025060	Ino80	100	96.408	ENSLAFG00000009951	INO80	100	96.408	Loxodonta_africana
MGP_SPRETEiJ_G0025060	Ino80	100	96.857	ENSMFAG00000044488	INO80	100	96.857	Macaca_fascicularis
MGP_SPRETEiJ_G0025060	Ino80	100	96.857	ENSMMUG00000001737	INO80	100	96.857	Macaca_mulatta
MGP_SPRETEiJ_G0025060	Ino80	100	96.665	ENSMNEG00000034906	INO80	100	96.665	Macaca_nemestrina
MGP_SPRETEiJ_G0025060	Ino80	100	96.857	ENSMLEG00000042117	INO80	100	96.857	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025060	Ino80	96	65.980	ENSMAMG00000013786	ino80	99	65.801	Mastacembelus_armatus
MGP_SPRETEiJ_G0025060	Ino80	99	71.098	ENSMZEG00005013146	ino80	99	73.819	Maylandia_zebra
MGP_SPRETEiJ_G0025060	Ino80	99	90.000	ENSMGAG00000011164	INO80	99	90.556	Meleagris_gallopavo
MGP_SPRETEiJ_G0025060	Ino80	99	98.417	ENSMAUG00000020670	Ino80	100	97.178	Mesocricetus_auratus
MGP_SPRETEiJ_G0025060	Ino80	100	96.087	ENSMICG00000005801	INO80	100	96.087	Microcebus_murinus
MGP_SPRETEiJ_G0025060	Ino80	100	98.589	ENSMOCG00000016879	Ino80	100	98.589	Microtus_ochrogaster
MGP_SPRETEiJ_G0025060	Ino80	96	66.455	ENSMMOG00000015046	ino80	99	65.911	Mola_mola
MGP_SPRETEiJ_G0025060	Ino80	100	93.658	ENSMODG00000000184	INO80	100	93.402	Monodelphis_domestica
MGP_SPRETEiJ_G0025060	Ino80	94	74.092	ENSMALG00000016488	ino80	98	76.738	Monopterus_albus
MGP_SPRETEiJ_G0025060	Ino80	100	96.604	MGP_CAROLIEiJ_G0024144	Ino80	100	96.604	Mus_caroli
MGP_SPRETEiJ_G0025060	Ino80	100	100.000	ENSMUSG00000034154	Ino80	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0025060	Ino80	100	98.910	MGP_PahariEiJ_G0025587	Ino80	100	98.910	Mus_pahari
MGP_SPRETEiJ_G0025060	Ino80	100	96.861	ENSMPUG00000008786	INO80	100	96.861	Mustela_putorius_furo
MGP_SPRETEiJ_G0025060	Ino80	100	96.110	ENSMLUG00000017764	INO80	100	96.110	Myotis_lucifugus
MGP_SPRETEiJ_G0025060	Ino80	100	97.375	ENSNGAG00000019497	Ino80	100	97.375	Nannospalax_galili
MGP_SPRETEiJ_G0025060	Ino80	99	65.520	ENSNBRG00000022086	ino80	99	69.554	Neolamprologus_brichardi
MGP_SPRETEiJ_G0025060	Ino80	100	94.612	ENSNLEG00000003454	INO80	100	94.227	Nomascus_leucogenys
MGP_SPRETEiJ_G0025060	Ino80	99	75.901	ENSOPRG00000000831	INO80	91	78.298	Ochotona_princeps
MGP_SPRETEiJ_G0025060	Ino80	100	96.151	ENSODEG00000016734	INO80	100	96.151	Octodon_degus
MGP_SPRETEiJ_G0025060	Ino80	98	74.298	ENSONIG00000000772	ino80	99	72.968	Oreochromis_niloticus
MGP_SPRETEiJ_G0025060	Ino80	100	96.729	ENSOCUG00000010763	INO80	100	96.729	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025060	Ino80	97	72.273	ENSORLG00000018028	ino80	98	71.932	Oryzias_latipes
MGP_SPRETEiJ_G0025060	Ino80	97	72.403	ENSORLG00015012507	ino80	98	71.867	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0025060	Ino80	96	72.918	ENSOMEG00000003791	ino80	97	72.186	Oryzias_melastigma
MGP_SPRETEiJ_G0025060	Ino80	100	97.114	ENSOGAG00000008998	INO80	100	97.114	Otolemur_garnettii
MGP_SPRETEiJ_G0025060	Ino80	100	95.527	ENSOARG00000020323	INO80	100	96.038	Ovis_aries
MGP_SPRETEiJ_G0025060	Ino80	100	96.793	ENSPPAG00000042104	INO80	100	96.793	Pan_paniscus
MGP_SPRETEiJ_G0025060	Ino80	100	96.925	ENSPPRG00000011011	INO80	100	96.925	Panthera_pardus
MGP_SPRETEiJ_G0025060	Ino80	100	96.669	ENSPTIG00000005911	INO80	100	96.669	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025060	Ino80	100	96.857	ENSPTRG00000006939	INO80	100	96.857	Pan_troglodytes
MGP_SPRETEiJ_G0025060	Ino80	100	96.857	ENSPANG00000019131	INO80	100	96.857	Papio_anubis
MGP_SPRETEiJ_G0025060	Ino80	98	75.556	ENSPKIG00000021450	ino80	98	75.778	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025060	Ino80	100	89.181	ENSPSIG00000014403	INO80	100	89.501	Pelodiscus_sinensis
MGP_SPRETEiJ_G0025060	Ino80	99	98.682	ENSPEMG00000013114	-	100	98.682	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025060	Ino80	100	93.594	ENSPCIG00000027848	INO80	100	93.338	Phascolarctos_cinereus
MGP_SPRETEiJ_G0025060	Ino80	99	71.268	ENSPFOG00000013082	ino80	97	72.662	Poecilia_formosa
MGP_SPRETEiJ_G0025060	Ino80	81	75.966	ENSPMEG00000021422	ino80	85	75.214	Poecilia_mexicana
MGP_SPRETEiJ_G0025060	Ino80	99	71.007	ENSPREG00000013650	ino80	95	73.663	Poecilia_reticulata
MGP_SPRETEiJ_G0025060	Ino80	99	94.402	ENSPPYG00000006368	INO80	99	94.402	Pongo_abelii
MGP_SPRETEiJ_G0025060	Ino80	100	95.125	ENSPCOG00000022332	INO80	100	94.804	Propithecus_coquereli
MGP_SPRETEiJ_G0025060	Ino80	100	94.163	ENSPVAG00000001852	INO80	100	93.778	Pteropus_vampyrus
MGP_SPRETEiJ_G0025060	Ino80	98	68.122	ENSPNYG00000002995	ino80	99	72.056	Pundamilia_nyererei
MGP_SPRETEiJ_G0025060	Ino80	100	75.000	ENSPNAG00000010386	ino80	100	75.048	Pygocentrus_nattereri
MGP_SPRETEiJ_G0025060	Ino80	100	98.845	ENSRNOG00000014483	Ino80	100	98.845	Rattus_norvegicus
MGP_SPRETEiJ_G0025060	Ino80	100	96.729	ENSRBIG00000031765	INO80	100	96.729	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025060	Ino80	100	96.793	ENSRROG00000033143	INO80	100	96.793	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025060	Ino80	98	95.187	ENSSBOG00000023493	INO80	100	95.187	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025060	Ino80	100	93.466	ENSSHAG00000016349	INO80	100	93.209	Sarcophilus_harrisii
MGP_SPRETEiJ_G0025060	Ino80	98	76.878	ENSSFOG00015000183	ino80	99	76.617	Scleropages_formosus
MGP_SPRETEiJ_G0025060	Ino80	97	73.759	ENSSMAG00000007221	ino80	99	72.208	Scophthalmus_maximus
MGP_SPRETEiJ_G0025060	Ino80	98	74.185	ENSSDUG00000009957	ino80	99	72.767	Seriola_dumerili
MGP_SPRETEiJ_G0025060	Ino80	98	72.007	ENSSLDG00000000389	ino80	91	72.863	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025060	Ino80	99	95.171	ENSSARG00000007876	INO80	99	93.209	Sorex_araneus
MGP_SPRETEiJ_G0025060	Ino80	99	68.641	ENSSPAG00000007779	ino80	98	72.535	Stegastes_partitus
MGP_SPRETEiJ_G0025060	Ino80	100	96.360	ENSSSCG00000004753	INO80	100	96.360	Sus_scrofa
MGP_SPRETEiJ_G0025060	Ino80	100	88.981	ENSTGUG00000010786	INO80	100	89.174	Taeniopygia_guttata
MGP_SPRETEiJ_G0025060	Ino80	99	71.784	ENSTRUG00000013026	ino80	98	73.977	Takifugu_rubripes
MGP_SPRETEiJ_G0025060	Ino80	100	95.125	ENSTTRG00000011479	INO80	100	94.740	Tursiops_truncatus
MGP_SPRETEiJ_G0025060	Ino80	100	96.407	ENSUMAG00000012190	-	99	96.407	Ursus_maritimus
MGP_SPRETEiJ_G0025060	Ino80	99	92.172	ENSVPAG00000002838	INO80	100	90.571	Vicugna_pacos
MGP_SPRETEiJ_G0025060	Ino80	100	96.923	ENSVVUG00000026698	INO80	100	96.923	Vulpes_vulpes
MGP_SPRETEiJ_G0025060	Ino80	99	73.414	ENSXETG00000034272	INO80	99	72.902	Xenopus_tropicalis
MGP_SPRETEiJ_G0025060	Ino80	99	71.454	ENSXMAG00000006742	ino80	98	74.385	Xiphophorus_maculatus