EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025061 (Gene tree)
Gene ID: -
Gene Symbol: Exd1
Alias: 4932702D22Rik|Exdl1
Full Name: exonuclease 3'-5' domain containing 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 32576 bases
Position: chr2:119895941-119928516
Accession: 3045306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0055953	DNA_pol_A_exo1	PF01612.20	2.3e-08	1	1
MGP_SPRETEiJ_P0055954	DNA_pol_A_exo1	PF01612.20	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0055955	-	537	-	MGP_SPRETEiJ_P0055955	98 (aa)	-	-
MGP_SPRETEiJ_T0055954	-	5209	-	MGP_SPRETEiJ_P0055954	570 (aa)	-	-
MGP_SPRETEiJ_T0055953	-	5964	-	MGP_SPRETEiJ_P0055953	570 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025061's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025061	Exd1	99	73.601	ENSG00000178997	EXD1	99	73.601	Homo_sapiens
MGP_SPRETEiJ_G0025061	Exd1	99	74.306	ENSAMEG00000016793	EXD1	99	74.306	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025061	Exd1	71	45.658	ENSAOCG00000009355	-	71	45.658	Amphiprion_ocellaris
MGP_SPRETEiJ_G0025061	Exd1	59	48.071	ENSAPEG00000002194	-	86	48.071	Amphiprion_percula
MGP_SPRETEiJ_G0025061	Exd1	69	58.481	ENSACAG00000003676	EXD1	100	58.481	Anolis_carolinensis
MGP_SPRETEiJ_G0025061	Exd1	99	73.298	ENSANAG00000029058	EXD1	99	73.298	Aotus_nancymaae
MGP_SPRETEiJ_G0025061	Exd1	70	42.432	ENSACLG00000001361	-	72	42.928	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025061	Exd1	68	43.041	ENSAMXG00000026016	-	73	43.041	Astyanax_mexicanus
MGP_SPRETEiJ_G0025061	Exd1	83	73.474	ENSBTAG00000008363	EXD1	99	73.474	Bos_taurus
MGP_SPRETEiJ_G0025061	Exd1	99	68.412	ENSCJAG00000020765	EXD1	99	68.412	Callithrix_jacchus
MGP_SPRETEiJ_G0025061	Exd1	99	71.429	ENSCAFG00000009510	EXD1	99	71.429	Canis_familiaris
MGP_SPRETEiJ_G0025061	Exd1	74	70.118	ENSCAFG00020005504	EXD1	99	70.118	Canis_lupus_dingo
MGP_SPRETEiJ_G0025061	Exd1	99	70.246	ENSCHIG00000019606	EXD1	99	70.246	Capra_hircus
MGP_SPRETEiJ_G0025061	Exd1	99	69.474	ENSCPOG00000010573	EXD1	99	69.474	Cavia_porcellus
MGP_SPRETEiJ_G0025061	Exd1	99	70.157	ENSCCAG00000016905	EXD1	99	70.157	Cebus_capucinus
MGP_SPRETEiJ_G0025061	Exd1	99	73.822	ENSCATG00000037400	EXD1	99	73.822	Cercocebus_atys
MGP_SPRETEiJ_G0025061	Exd1	88	56.031	ENSCSAG00000007647	EXD1	99	56.031	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025061	Exd1	88	66.931	ENSCHOG00000011441	EXD1	99	66.931	Choloepus_hoffmanni
MGP_SPRETEiJ_G0025061	Exd1	99	52.333	ENSCPBG00000013511	EXD1	93	52.500	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025061	Exd1	99	69.808	ENSCANG00000036848	EXD1	99	69.808	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025061	Exd1	100	86.189	ENSCGRG00001011355	Exd1	97	86.189	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025061	Exd1	100	86.189	ENSCGRG00000011633	Exd1	100	86.189	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025061	Exd1	67	43.445	ENSCSEG00000000904	-	68	43.445	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0025061	Exd1	63	35.655	ENSDARG00000098669	exd1	85	41.985	Danio_rerio
MGP_SPRETEiJ_G0025061	Exd1	99	72.997	ENSDNOG00000011410	EXD1	99	72.997	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025061	Exd1	94	72.624	ENSDORG00000012079	Exd1	99	72.624	Dipodomys_ordii
MGP_SPRETEiJ_G0025061	Exd1	69	68.333	ENSETEG00000014257	-	78	68.333	Echinops_telfairi
MGP_SPRETEiJ_G0025061	Exd1	99	71.701	ENSEASG00005016394	EXD1	99	71.701	Equus_asinus_asinus
MGP_SPRETEiJ_G0025061	Exd1	99	73.473	ENSECAG00000021250	EXD1	99	73.473	Equus_caballus
MGP_SPRETEiJ_G0025061	Exd1	87	65.800	ENSEEUG00000001232	EXD1	99	65.800	Erinaceus_europaeus
MGP_SPRETEiJ_G0025061	Exd1	71	42.469	ENSELUG00000006324	-	67	42.469	Esox_lucius
MGP_SPRETEiJ_G0025061	Exd1	99	74.781	ENSFCAG00000028533	EXD1	99	75.218	Felis_catus
MGP_SPRETEiJ_G0025061	Exd1	57	45.201	ENSGMOG00000015956	-	96	44.099	Gadus_morhua
MGP_SPRETEiJ_G0025061	Exd1	67	51.392	ENSGALG00000041449	EXD1	95	51.392	Gallus_gallus
MGP_SPRETEiJ_G0025061	Exd1	68	42.308	ENSGAFG00000017161	-	71	42.308	Gambusia_affinis
MGP_SPRETEiJ_G0025061	Exd1	99	51.351	ENSGAGG00000019200	EXD1	93	51.351	Gopherus_agassizii
MGP_SPRETEiJ_G0025061	Exd1	99	73.252	ENSGGOG00000004594	EXD1	99	73.252	Gorilla_gorilla
MGP_SPRETEiJ_G0025061	Exd1	99	71.103	ENSHGLG00000015369	EXD1	99	71.103	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025061	Exd1	99	70.053	ENSHGLG00100007398	EXD1	100	70.053	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025061	Exd1	99	77.583	ENSSTOG00000014980	EXD1	99	77.583	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025061	Exd1	79	41.357	ENSLBEG00000000022	-	79	41.357	Labrus_bergylta
MGP_SPRETEiJ_G0025061	Exd1	82	46.921	ENSLACG00000006680	EXD1	77	46.921	Latimeria_chalumnae
MGP_SPRETEiJ_G0025061	Exd1	70	44.472	ENSLOCG00000012278	-	97	44.472	Lepisosteus_oculatus
MGP_SPRETEiJ_G0025061	Exd1	92	69.606	ENSLAFG00000014739	EXD1	99	69.606	Loxodonta_africana
MGP_SPRETEiJ_G0025061	Exd1	99	73.647	ENSMFAG00000034670	EXD1	99	73.647	Macaca_fascicularis
MGP_SPRETEiJ_G0025061	Exd1	99	73.473	ENSMMUG00000013991	EXD1	99	73.473	Macaca_mulatta
MGP_SPRETEiJ_G0025061	Exd1	99	73.647	ENSMNEG00000037333	EXD1	99	73.647	Macaca_nemestrina
MGP_SPRETEiJ_G0025061	Exd1	62	80.398	ENSMLEG00000033153	EXD1	97	85.965	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025061	Exd1	70	42.928	ENSMZEG00005009193	-	75	43.424	Maylandia_zebra
MGP_SPRETEiJ_G0025061	Exd1	67	51.020	ENSMGAG00000011179	EXD1	98	51.020	Meleagris_gallopavo
MGP_SPRETEiJ_G0025061	Exd1	100	84.939	ENSMAUG00000002698	Exd1	100	84.939	Mesocricetus_auratus
MGP_SPRETEiJ_G0025061	Exd1	99	75.436	ENSMICG00000014337	EXD1	99	75.436	Microcebus_murinus
MGP_SPRETEiJ_G0025061	Exd1	100	81.961	ENSMOCG00000018151	Exd1	100	81.961	Microtus_ochrogaster
MGP_SPRETEiJ_G0025061	Exd1	90	63.429	ENSMODG00000000164	EXD1	99	63.429	Monodelphis_domestica
MGP_SPRETEiJ_G0025061	Exd1	69	41.476	ENSMALG00000015814	-	87	40.988	Monopterus_albus
MGP_SPRETEiJ_G0025061	Exd1	100	95.789	MGP_CAROLIEiJ_G0024145	Exd1	100	95.789	Mus_caroli
MGP_SPRETEiJ_G0025061	Exd1	100	97.544	ENSMUSG00000048647	Exd1	100	97.544	Mus_musculus
MGP_SPRETEiJ_G0025061	Exd1	100	88.947	MGP_PahariEiJ_G0025588	Exd1	100	88.947	Mus_pahari
MGP_SPRETEiJ_G0025061	Exd1	99	74.216	ENSMPUG00000008811	EXD1	99	74.216	Mustela_putorius_furo
MGP_SPRETEiJ_G0025061	Exd1	92	71.834	ENSMLUG00000001466	EXD1	99	71.834	Myotis_lucifugus
MGP_SPRETEiJ_G0025061	Exd1	100	77.622	ENSNGAG00000002319	Exd1	100	77.622	Nannospalax_galili
MGP_SPRETEiJ_G0025061	Exd1	99	69.965	ENSNLEG00000003456	EXD1	98	71.344	Nomascus_leucogenys
MGP_SPRETEiJ_G0025061	Exd1	88	61.154	ENSOPRG00000016433	EXD1	99	61.154	Ochotona_princeps
MGP_SPRETEiJ_G0025061	Exd1	67	43.523	ENSONIG00000012043	-	97	44.301	Oreochromis_niloticus
MGP_SPRETEiJ_G0025061	Exd1	89	69.455	ENSOCUG00000013817	EXD1	99	69.455	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025061	Exd1	69	41.814	ENSORLG00000026344	-	74	41.814	Oryzias_latipes
MGP_SPRETEiJ_G0025061	Exd1	70	41.769	ENSORLG00020005465	-	76	41.769	Oryzias_latipes_hni
MGP_SPRETEiJ_G0025061	Exd1	70	42.015	ENSORLG00015004848	-	77	42.015	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0025061	Exd1	67	44.216	ENSOMEG00000019812	-	77	43.243	Oryzias_melastigma
MGP_SPRETEiJ_G0025061	Exd1	90	66.346	ENSOGAG00000013095	EXD1	99	66.538	Otolemur_garnettii
MGP_SPRETEiJ_G0025061	Exd1	99	73.730	ENSOARG00000020330	EXD1	99	73.730	Ovis_aries
MGP_SPRETEiJ_G0025061	Exd1	99	73.473	ENSPPAG00000033760	EXD1	99	73.252	Pan_paniscus
MGP_SPRETEiJ_G0025061	Exd1	99	74.606	ENSPPRG00000011128	EXD1	99	74.606	Panthera_pardus
MGP_SPRETEiJ_G0025061	Exd1	99	74.650	ENSPTIG00000020026	EXD1	99	75.087	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025061	Exd1	99	73.427	ENSPTRG00000006941	EXD1	99	73.427	Pan_troglodytes
MGP_SPRETEiJ_G0025061	Exd1	99	73.647	ENSPANG00000019000	EXD1	99	73.647	Papio_anubis
MGP_SPRETEiJ_G0025061	Exd1	68	41.985	ENSPKIG00000000671	-	70	41.985	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025061	Exd1	98	52.174	ENSPSIG00000014473	EXD1	92	52.098	Pelodiscus_sinensis
MGP_SPRETEiJ_G0025061	Exd1	71	37.778	ENSPMGG00000015466	-	79	37.778	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025061	Exd1	85	64.170	ENSPCIG00000027845	EXD1	98	64.170	Phascolarctos_cinereus
MGP_SPRETEiJ_G0025061	Exd1	68	41.206	ENSPFOG00000013673	-	96	41.206	Poecilia_formosa
MGP_SPRETEiJ_G0025061	Exd1	68	42.132	ENSPLAG00000014262	-	71	42.132	Poecilia_latipinna
MGP_SPRETEiJ_G0025061	Exd1	68	42.386	ENSPMEG00000012071	-	71	42.386	Poecilia_mexicana
MGP_SPRETEiJ_G0025061	Exd1	68	43.147	ENSPREG00000019468	-	71	43.147	Poecilia_reticulata
MGP_SPRETEiJ_G0025061	Exd1	88	72.530	ENSPPYG00000006369	EXD1	98	72.530	Pongo_abelii
MGP_SPRETEiJ_G0025061	Exd1	68	61.538	ENSPCAG00000005269	-	75	61.538	Procavia_capensis
MGP_SPRETEiJ_G0025061	Exd1	99	72.822	ENSPCOG00000026598	EXD1	99	74.419	Propithecus_coquereli
MGP_SPRETEiJ_G0025061	Exd1	88	74.251	ENSPVAG00000003149	EXD1	98	74.251	Pteropus_vampyrus
MGP_SPRETEiJ_G0025061	Exd1	71	43.062	ENSPNAG00000008931	exd1	81	43.062	Pygocentrus_nattereri
MGP_SPRETEiJ_G0025061	Exd1	100	87.544	ENSRNOG00000025360	Exd1	100	87.544	Rattus_norvegicus
MGP_SPRETEiJ_G0025061	Exd1	62	84.943	ENSRBIG00000037257	EXD1	100	84.943	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025061	Exd1	99	73.298	ENSRROG00000034491	EXD1	99	73.298	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025061	Exd1	99	65.620	ENSSBOG00000024842	EXD1	99	65.620	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025061	Exd1	89	64.245	ENSSHAG00000016701	EXD1	97	64.245	Sarcophilus_harrisii
MGP_SPRETEiJ_G0025061	Exd1	70	45.500	ENSSDUG00000004368	exd1	67	45.750	Seriola_dumerili
MGP_SPRETEiJ_G0025061	Exd1	85	70.000	ENSSARG00000009556	-	98	69.384	Sorex_araneus
MGP_SPRETEiJ_G0025061	Exd1	98	44.021	ENSSPUG00000001716	EXD1	91	44.367	Sphenodon_punctatus
MGP_SPRETEiJ_G0025061	Exd1	99	73.693	ENSSSCG00000004752	EXD1	99	73.693	Sus_scrofa
MGP_SPRETEiJ_G0025061	Exd1	67	39.487	ENSTNIG00000017431	-	93	39.487	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0025061	Exd1	74	60.047	ENSTBEG00000003085	EXD1	99	60.047	Tupaia_belangeri
MGP_SPRETEiJ_G0025061	Exd1	87	73.108	ENSTTRG00000009809	EXD1	97	73.108	Tursiops_truncatus
MGP_SPRETEiJ_G0025061	Exd1	99	74.913	ENSUMAG00000012170	EXD1	99	74.913	Ursus_maritimus
MGP_SPRETEiJ_G0025061	Exd1	89	73.242	ENSVPAG00000007758	EXD1	99	73.242	Vicugna_pacos
MGP_SPRETEiJ_G0025061	Exd1	99	71.429	ENSVVUG00000026704	EXD1	99	71.429	Vulpes_vulpes
MGP_SPRETEiJ_G0025061	Exd1	68	47.208	ENSXETG00000017895	exd1	95	47.208	Xenopus_tropicalis
MGP_SPRETEiJ_G0025061	Exd1	58	41.818	ENSXCOG00000010879	-	84	41.818	Xiphophorus_couchianus
MGP_SPRETEiJ_G0025061	Exd1	64	41.598	ENSXMAG00000014462	-	86	41.742	Xiphophorus_maculatus