EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025122 (Gene tree)
Gene ID: -
Gene Symbol: Patl2
Alias: 4930424G05Rik|Pat1a
Full Name: protein associated with topoisomerase II homolog 2 (yeast)
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 70585 bases
Position: chr2:122608373-122678957
Accession: 1914828
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0056323	PAT1	PF09770.9	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0056323	-	2438	-	MGP_SPRETEiJ_P0056323	531 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025122's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025122's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025122	Patl2	100	68.297	ENSG00000229474	PATL2	96	79.706	Homo_sapiens
MGP_SPRETEiJ_G0025122	Patl2	83	42.451	ENSAPOG00000022988	patl2	65	42.232	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025122	Patl2	89	72.840	ENSAMEG00000014997	PATL2	93	72.088	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025122	Patl2	78	43.662	ENSAOCG00000023738	patl2	53	43.427	Amphiprion_ocellaris
MGP_SPRETEiJ_G0025122	Patl2	78	44.000	ENSAPEG00000011299	patl2	64	43.662	Amphiprion_percula
MGP_SPRETEiJ_G0025122	Patl2	78	42.180	ENSATEG00000019567	patl2	63	41.844	Anabas_testudineus
MGP_SPRETEiJ_G0025122	Patl2	89	46.050	ENSAPLG00000003980	PATL2	83	46.050	Anas_platyrhynchos
MGP_SPRETEiJ_G0025122	Patl2	51	37.931	ENSAPLG00000013394	PATL1	59	38.062	Anas_platyrhynchos
MGP_SPRETEiJ_G0025122	Patl2	62	51.335	ENSACAG00000006951	-	97	49.451	Anolis_carolinensis
MGP_SPRETEiJ_G0025122	Patl2	100	68.058	ENSANAG00000022701	PATL2	97	68.058	Aotus_nancymaae
MGP_SPRETEiJ_G0025122	Patl2	81	42.920	ENSACLG00000010326	patl2	59	42.920	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025122	Patl2	78	45.714	ENSAMXG00000020293	patl2	60	43.418	Astyanax_mexicanus
MGP_SPRETEiJ_G0025122	Patl2	64	76.471	ENSBTAG00000001558	PATL2	95	76.471	Bos_taurus
MGP_SPRETEiJ_G0025122	Patl2	100	67.332	ENSCJAG00000002379	PATL2	97	67.514	Callithrix_jacchus
MGP_SPRETEiJ_G0025122	Patl2	98	69.061	ENSCAFG00000013629	PATL2	97	68.877	Canis_familiaris
MGP_SPRETEiJ_G0025122	Patl2	98	69.202	ENSCAFG00020022169	PATL2	96	69.017	Canis_lupus_dingo
MGP_SPRETEiJ_G0025122	Patl2	99	65.720	ENSCHIG00000026665	PATL2	96	65.720	Capra_hircus
MGP_SPRETEiJ_G0025122	Patl2	100	66.364	ENSTSYG00000032456	PATL2	97	66.545	Carlito_syrichta
MGP_SPRETEiJ_G0025122	Patl2	98	66.290	ENSCPOG00000002922	PATL2	100	66.290	Cavia_porcellus
MGP_SPRETEiJ_G0025122	Patl2	100	67.824	ENSCCAG00000025261	PATL2	98	68.556	Cebus_capucinus
MGP_SPRETEiJ_G0025122	Patl2	100	68.240	ENSCATG00000034794	PATL2	96	80.000	Cercocebus_atys
MGP_SPRETEiJ_G0025122	Patl2	98	68.834	ENSCLAG00000014407	PATL2	99	68.582	Chinchilla_lanigera
MGP_SPRETEiJ_G0025122	Patl2	98	68.450	ENSCSAG00000009601	PATL2	97	69.188	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025122	Patl2	73	36.908	ENSCSAG00000006095	PATL1	51	37.815	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025122	Patl2	73	36.658	ENSCHOG00000001611	PATL1	57	37.535	Choloepus_hoffmanni
MGP_SPRETEiJ_G0025122	Patl2	83	52.135	ENSCPBG00000006150	PATL2	62	53.647	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025122	Patl2	53	31.544	ENSCSAVG00000002430	-	77	31.544	Ciona_savignyi
MGP_SPRETEiJ_G0025122	Patl2	100	68.670	ENSCANG00000013856	PATL2	97	69.581	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025122	Patl2	98	77.820	ENSCGRG00001010801	Patl2	100	78.585	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025122	Patl2	98	77.820	ENSCGRG00000013007	Patl2	100	78.585	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025122	Patl2	92	39.619	ENSCSEG00000009438	patl2	73	39.619	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0025122	Patl2	78	38.498	ENSCVAG00000016203	patl2	62	37.237	Cyprinodon_variegatus
MGP_SPRETEiJ_G0025122	Patl2	80	44.240	ENSDARG00000089567	patl2	59	43.779	Danio_rerio
MGP_SPRETEiJ_G0025122	Patl2	100	66.905	ENSDNOG00000036837	PATL2	92	68.336	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025122	Patl2	73	36.409	ENSDNOG00000038865	PATL1	64	37.535	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025122	Patl2	97	66.279	ENSDORG00000026649	Patl2	99	66.085	Dipodomys_ordii
MGP_SPRETEiJ_G0025122	Patl2	64	73.235	ENSETEG00000005068	PATL2	96	74.412	Echinops_telfairi
MGP_SPRETEiJ_G0025122	Patl2	99	66.789	ENSEASG00005017984	PATL2	97	66.422	Equus_asinus_asinus
MGP_SPRETEiJ_G0025122	Patl2	99	70.404	ENSECAG00000013462	PATL2	97	70.037	Equus_caballus
MGP_SPRETEiJ_G0025122	Patl2	77	45.913	ENSELUG00000023244	patl2	56	45.324	Esox_lucius
MGP_SPRETEiJ_G0025122	Patl2	100	68.877	ENSFCAG00000027170	PATL2	97	68.508	Felis_catus
MGP_SPRETEiJ_G0025122	Patl2	81	51.136	ENSFALG00000009768	PATL2	58	52.955	Ficedula_albicollis
MGP_SPRETEiJ_G0025122	Patl2	98	66.539	ENSFDAG00000012242	PATL2	100	66.922	Fukomys_damarensis
MGP_SPRETEiJ_G0025122	Patl2	58	41.346	ENSFHEG00000009727	patl2	59	40.984	Fundulus_heteroclitus
MGP_SPRETEiJ_G0025122	Patl2	78	40.878	ENSGMOG00000005666	patl2	98	41.190	Gadus_morhua
MGP_SPRETEiJ_G0025122	Patl2	79	50.831	ENSGALG00000002167	PATL2	52	52.257	Gallus_gallus
MGP_SPRETEiJ_G0025122	Patl2	78	44.186	ENSGAFG00000019344	patl2	58	43.852	Gambusia_affinis
MGP_SPRETEiJ_G0025122	Patl2	73	36.725	ENSGAGG00000004461	PATL1	51	37.709	Gopherus_agassizii
MGP_SPRETEiJ_G0025122	Patl2	100	67.877	ENSGGOG00000025923	PATL2	97	68.421	Gorilla_gorilla
MGP_SPRETEiJ_G0025122	Patl2	81	43.080	ENSHBUG00000005929	patl2	67	43.304	Haplochromis_burtoni
MGP_SPRETEiJ_G0025122	Patl2	98	65.849	ENSHGLG00000017415	-	100	65.299	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025122	Patl2	98	66.415	ENSHGLG00100008419	-	100	65.858	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025122	Patl2	78	43.256	ENSHCOG00000016754	patl2	57	43.256	Hippocampus_comes
MGP_SPRETEiJ_G0025122	Patl2	80	42.956	ENSIPUG00000020692	patl2	60	41.839	Ictalurus_punctatus
MGP_SPRETEiJ_G0025122	Patl2	100	69.259	ENSSTOG00000033848	PATL2	97	69.259	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025122	Patl2	82	41.432	ENSKMAG00000021275	patl2	60	41.215	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0025122	Patl2	83	40.586	ENSLBEG00000022344	patl2	62	40.377	Labrus_bergylta
MGP_SPRETEiJ_G0025122	Patl2	86	41.116	ENSLACG00000005291	-	61	41.529	Latimeria_chalumnae
MGP_SPRETEiJ_G0025122	Patl2	98	67.173	ENSLAFG00000031124	PATL2	98	67.932	Loxodonta_africana
MGP_SPRETEiJ_G0025122	Patl2	100	68.364	ENSMFAG00000003565	PATL2	97	69.517	Macaca_fascicularis
MGP_SPRETEiJ_G0025122	Patl2	64	79.706	ENSMMUG00000014294	PATL2	96	79.706	Macaca_mulatta
MGP_SPRETEiJ_G0025122	Patl2	100	68.421	ENSMNEG00000034510	PATL2	97	69.573	Macaca_nemestrina
MGP_SPRETEiJ_G0025122	Patl2	100	68.966	ENSMLEG00000042248	PATL2	97	68.784	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025122	Patl2	78	42.584	ENSMAMG00000013327	patl2	63	41.766	Mastacembelus_armatus
MGP_SPRETEiJ_G0025122	Patl2	81	42.920	ENSMZEG00005014292	patl2	59	42.920	Maylandia_zebra
MGP_SPRETEiJ_G0025122	Patl2	86	45.347	ENSMGAG00000001309	PATL2	81	46.337	Meleagris_gallopavo
MGP_SPRETEiJ_G0025122	Patl2	100	78.236	ENSMAUG00000001008	Patl2	98	78.799	Mesocricetus_auratus
MGP_SPRETEiJ_G0025122	Patl2	64	78.824	ENSMICG00000005037	PATL2	96	78.824	Microcebus_murinus
MGP_SPRETEiJ_G0025122	Patl2	100	79.511	ENSMOCG00000015367	Patl2	100	78.947	Microtus_ochrogaster
MGP_SPRETEiJ_G0025122	Patl2	80	35.000	ENSMMOG00000013711	patl1	50	36.782	Mola_mola
MGP_SPRETEiJ_G0025122	Patl2	78	38.278	ENSMMOG00000001299	patl2	61	38.517	Mola_mola
MGP_SPRETEiJ_G0025122	Patl2	89	64.694	ENSMODG00000017690	PATL2	87	63.928	Monodelphis_domestica
MGP_SPRETEiJ_G0025122	Patl2	79	43.224	ENSMALG00000008131	patl2	54	42.991	Monopterus_albus
MGP_SPRETEiJ_G0025122	Patl2	65	37.815	ENSMALG00000018706	patl1	51	37.815	Monopterus_albus
MGP_SPRETEiJ_G0025122	Patl2	100	97.556	MGP_CAROLIEiJ_G0024205	Patl2	100	97.556	Mus_caroli
MGP_SPRETEiJ_G0025122	Patl2	98	98.081	ENSMUSG00000027233	Patl2	98	98.081	Mus_musculus
MGP_SPRETEiJ_G0025122	Patl2	100	94.915	MGP_PahariEiJ_G0025648	Patl2	100	94.727	Mus_pahari
MGP_SPRETEiJ_G0025122	Patl2	97	68.269	ENSNGAG00000020368	Patl2	99	65.201	Nannospalax_galili
MGP_SPRETEiJ_G0025122	Patl2	81	42.634	ENSNBRG00000011745	patl2	63	42.411	Neolamprologus_brichardi
MGP_SPRETEiJ_G0025122	Patl2	100	69.287	ENSNLEG00000005673	PATL2	97	69.720	Nomascus_leucogenys
MGP_SPRETEiJ_G0025122	Patl2	65	38.095	ENSOPRG00000007963	PATL1	54	38.095	Ochotona_princeps
MGP_SPRETEiJ_G0025122	Patl2	81	42.826	ENSONIG00000011519	patl2	59	42.826	Oreochromis_niloticus
MGP_SPRETEiJ_G0025122	Patl2	65	37.989	ENSOANG00000011117	-	87	37.989	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0025122	Patl2	84	58.667	ENSOANG00000001538	-	100	58.000	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0025122	Patl2	98	68.571	ENSOCUG00000006339	PATL2	99	68.561	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025122	Patl2	78	42.326	ENSORLG00000005780	patl2	56	42.130	Oryzias_latipes
MGP_SPRETEiJ_G0025122	Patl2	81	41.850	ENSORLG00020016506	patl2	58	41.667	Oryzias_latipes_hni
MGP_SPRETEiJ_G0025122	Patl2	78	42.326	ENSORLG00015014500	patl2	56	42.130	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0025122	Patl2	74	42.506	ENSOMEG00000021628	patl2	60	41.798	Oryzias_melastigma
MGP_SPRETEiJ_G0025122	Patl2	99	66.913	ENSOGAG00000004709	PATL2	97	66.913	Otolemur_garnettii
MGP_SPRETEiJ_G0025122	Patl2	98	65.730	ENSOARG00000003762	PATL2	98	65.730	Ovis_aries
MGP_SPRETEiJ_G0025122	Patl2	100	67.870	ENSPPAG00000007221	PATL2	97	68.412	Pan_paniscus
MGP_SPRETEiJ_G0025122	Patl2	100	68.566	ENSPPRG00000004279	PATL2	97	68.199	Panthera_pardus
MGP_SPRETEiJ_G0025122	Patl2	100	68.692	ENSPTIG00000018964	PATL2	97	68.324	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025122	Patl2	100	68.051	ENSPTRG00000041536	PATL2	97	68.592	Pan_troglodytes
MGP_SPRETEiJ_G0025122	Patl2	100	68.182	ENSPANG00000018026	PATL2	97	69.331	Papio_anubis
MGP_SPRETEiJ_G0025122	Patl2	74	43.521	ENSPKIG00000016887	patl2	60	41.215	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025122	Patl2	89	46.559	ENSPSIG00000017690	PATL2	98	49.630	Pelodiscus_sinensis
MGP_SPRETEiJ_G0025122	Patl2	82	40.268	ENSPMGG00000014550	patl2	68	39.374	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025122	Patl2	98	81.190	ENSPEMG00000016509	Patl2	98	81.190	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025122	Patl2	89	62.815	ENSPCIG00000018256	PATL2	92	60.729	Phascolarctos_cinereus
MGP_SPRETEiJ_G0025122	Patl2	78	43.953	ENSPFOG00000007305	patl2	57	43.953	Poecilia_formosa
MGP_SPRETEiJ_G0025122	Patl2	78	43.953	ENSPLAG00000020713	patl2	57	43.953	Poecilia_latipinna
MGP_SPRETEiJ_G0025122	Patl2	78	43.953	ENSPMEG00000018942	patl2	57	43.953	Poecilia_mexicana
MGP_SPRETEiJ_G0025122	Patl2	65	42.458	ENSPREG00000023066	patl2	55	42.340	Poecilia_reticulata
MGP_SPRETEiJ_G0025122	Patl2	100	68.529	ENSPCOG00000000295	PATL2	96	79.118	Propithecus_coquereli
MGP_SPRETEiJ_G0025122	Patl2	81	42.857	ENSPNYG00000017381	patl2	67	43.080	Pundamilia_nyererei
MGP_SPRETEiJ_G0025122	Patl2	78	44.787	ENSPNAG00000002315	patl2	59	43.387	Pygocentrus_nattereri
MGP_SPRETEiJ_G0025122	Patl2	98	87.885	ENSRNOG00000017061	Patl2	98	87.692	Rattus_norvegicus
MGP_SPRETEiJ_G0025122	Patl2	100	67.877	ENSRBIG00000040369	PATL2	97	68.784	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025122	Patl2	100	68.058	ENSRROG00000028786	PATL2	97	68.966	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025122	Patl2	100	66.243	ENSSBOG00000034766	PATL2	98	67.151	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025122	Patl2	88	42.083	ENSSFOG00015000720	patl2	62	41.788	Scleropages_formosus
MGP_SPRETEiJ_G0025122	Patl2	89	40.412	ENSSMAG00000017262	patl2	75	40.000	Scophthalmus_maximus
MGP_SPRETEiJ_G0025122	Patl2	81	41.593	ENSSDUG00000022927	patl2	59	41.372	Seriola_dumerili
MGP_SPRETEiJ_G0025122	Patl2	78	41.784	ENSSLDG00000017922	patl2	53	44.886	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025122	Patl2	92	65.385	ENSSARG00000009047	PATL2	97	65.909	Sorex_araneus
MGP_SPRETEiJ_G0025122	Patl2	64	55.523	ENSSPUG00000019065	PATL2	97	55.523	Sphenodon_punctatus
MGP_SPRETEiJ_G0025122	Patl2	78	40.941	ENSSPAG00000004784	patl2	62	40.845	Stegastes_partitus
MGP_SPRETEiJ_G0025122	Patl2	73	36.409	ENSSSCG00000013124	PATL1	53	37.255	Sus_scrofa
MGP_SPRETEiJ_G0025122	Patl2	72	52.835	ENSTGUG00000004619	-	98	52.835	Taeniopygia_guttata
MGP_SPRETEiJ_G0025122	Patl2	77	43.230	ENSTRUG00000005647	patl2	58	42.755	Takifugu_rubripes
MGP_SPRETEiJ_G0025122	Patl2	65	37.815	ENSTTRG00000009389	PATL1	54	37.815	Tursiops_truncatus
MGP_SPRETEiJ_G0025122	Patl2	100	68.705	ENSUAMG00000018533	PATL2	97	68.705	Ursus_americanus
MGP_SPRETEiJ_G0025122	Patl2	73	36.341	ENSUMAG00000018634	PATL1	52	37.430	Ursus_maritimus
MGP_SPRETEiJ_G0025122	Patl2	100	68.705	ENSUMAG00000007738	PATL2	97	68.705	Ursus_maritimus
MGP_SPRETEiJ_G0025122	Patl2	73	36.658	ENSVVUG00000016668	PATL1	51	37.535	Vulpes_vulpes
MGP_SPRETEiJ_G0025122	Patl2	96	69.173	ENSVVUG00000011576	PATL2	96	68.797	Vulpes_vulpes
MGP_SPRETEiJ_G0025122	Patl2	74	45.545	ENSXETG00000014167	patl2	68	44.159	Xenopus_tropicalis
MGP_SPRETEiJ_G0025122	Patl2	73	36.090	ENSXCOG00000010808	patl1	66	37.166	Xiphophorus_couchianus
MGP_SPRETEiJ_G0025122	Patl2	78	43.953	ENSXMAG00000018464	patl2	56	43.953	Xiphophorus_maculatus