EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025142 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 14876 bases
Position: chr2:125686885-125701760
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0056406	RRM_1	PF00076.22	2.6e-23	1	2
MGP_SPRETEiJ_P0056406	RRM_1	PF00076.22	2.6e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0056406	-	1000	-	MGP_SPRETEiJ_P0056406	287 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0025142	-	99	89.375	MGP_SPRETEiJ_G0025141	Myef2	73	89.375
MGP_SPRETEiJ_G0025142	-	92	52.013	MGP_SPRETEiJ_G0022325	Hnrnpm	51	51.125

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025142	-	99	77.812	ENSG00000104177	MYEF2	98	77.236	Homo_sapiens
MGP_SPRETEiJ_G0025142	-	89	63.265	ENSAPOG00000015050	myef2	68	62.951	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025142	-	88	82.699	ENSAMEG00000001964	MYEF2	66	82.699	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025142	-	85	66.078	ENSACIG00000020446	myef2	60	68.302	Amphilophus_citrinellus
MGP_SPRETEiJ_G0025142	-	91	62.914	ENSAOCG00000017431	myef2	68	63.279	Amphiprion_ocellaris
MGP_SPRETEiJ_G0025142	-	91	62.583	ENSAPEG00000024834	myef2	68	62.951	Amphiprion_percula
MGP_SPRETEiJ_G0025142	-	89	64.041	ENSATEG00000017892	myef2	66	64.041	Anabas_testudineus
MGP_SPRETEiJ_G0025142	-	84	72.887	ENSAPLG00000008935	MYEF2	72	72.887	Anas_platyrhynchos
MGP_SPRETEiJ_G0025142	-	99	64.848	ENSACAG00000004806	MYEF2	64	64.848	Anolis_carolinensis
MGP_SPRETEiJ_G0025142	-	99	78.116	ENSANAG00000036558	MYEF2	69	82.500	Aotus_nancymaae
MGP_SPRETEiJ_G0025142	-	82	67.293	ENSACLG00000017421	myef2	65	66.071	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025142	-	87	63.415	ENSAMXG00000038244	myef2	64	62.671	Astyanax_mexicanus
MGP_SPRETEiJ_G0025142	-	99	79.635	ENSBTAG00000008771	MYEF2	76	79.635	Bos_taurus
MGP_SPRETEiJ_G0025142	-	99	78.419	ENSCJAG00000001875	MYEF2	71	78.419	Callithrix_jacchus
MGP_SPRETEiJ_G0025142	-	85	82.734	ENSCAFG00000014008	MYEF2	73	82.734	Canis_familiaris
MGP_SPRETEiJ_G0025142	-	99	78.144	ENSCHIG00000022164	MYEF2	74	78.144	Capra_hircus
MGP_SPRETEiJ_G0025142	-	99	79.573	ENSTSYG00000010575	MYEF2	69	82.143	Carlito_syrichta
MGP_SPRETEiJ_G0025142	-	89	77.027	ENSCAPG00000017762	MYEF2	63	79.643	Cavia_aperea
MGP_SPRETEiJ_G0025142	-	99	75.153	ENSCPOG00000010584	MYEF2	63	77.143	Cavia_porcellus
MGP_SPRETEiJ_G0025142	-	99	78.723	ENSCCAG00000033878	MYEF2	69	82.500	Cebus_capucinus
MGP_SPRETEiJ_G0025142	-	99	78.116	ENSCATG00000039268	MYEF2	69	81.786	Cercocebus_atys
MGP_SPRETEiJ_G0025142	-	99	80.675	ENSCLAG00000008328	MYEF2	72	80.675	Chinchilla_lanigera
MGP_SPRETEiJ_G0025142	-	99	78.116	ENSCSAG00000010366	MYEF2	68	78.116	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025142	-	99	67.552	ENSCPBG00000024789	MYEF2	75	67.552	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025142	-	99	78.419	ENSCANG00000022275	MYEF2	71	78.419	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025142	-	99	88.438	ENSCGRG00001024080	-	71	88.438	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025142	-	84	87.636	ENSCGRG00000012257	-	68	87.636	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025142	-	82	65.441	ENSCSEG00000005597	myef2	62	65.441	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0025142	-	61	51.020	ENSCVAG00000010801	myef2	54	51.020	Cyprinodon_variegatus
MGP_SPRETEiJ_G0025142	-	83	63.004	ENSDARG00000059398	myef2	62	63.004	Danio_rerio
MGP_SPRETEiJ_G0025142	-	99	79.268	ENSDNOG00000038711	MYEF2	71	79.268	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025142	-	82	84.962	ENSDORG00000015835	-	65	84.962	Dipodomys_ordii
MGP_SPRETEiJ_G0025142	-	54	71.429	ENSETEG00000005360	MYEF2	53	71.429	Echinops_telfairi
MGP_SPRETEiJ_G0025142	-	68	54.237	ENSEBUG00000016563	myef2	59	48.582	Eptatretus_burgeri
MGP_SPRETEiJ_G0025142	-	99	76.647	ENSEASG00005017818	MYEF2	75	78.743	Equus_asinus_asinus
MGP_SPRETEiJ_G0025142	-	99	77.812	ENSECAG00000034546	-	68	79.939	Equus_caballus
MGP_SPRETEiJ_G0025142	-	99	77.812	ENSECAG00000005741	MYEF2	71	79.939	Equus_caballus
MGP_SPRETEiJ_G0025142	-	82	63.504	ENSELUG00000003712	myef2	56	65.693	Esox_lucius
MGP_SPRETEiJ_G0025142	-	99	77.246	ENSFCAG00000027198	MYEF2	71	79.939	Felis_catus
MGP_SPRETEiJ_G0025142	-	84	72.340	ENSFALG00000011565	MYEF2	66	72.535	Ficedula_albicollis
MGP_SPRETEiJ_G0025142	-	84	84.364	ENSFDAG00000007098	MYEF2	68	84.364	Fukomys_damarensis
MGP_SPRETEiJ_G0025142	-	99	57.321	ENSFHEG00000002386	myef2	69	57.321	Fundulus_heteroclitus
MGP_SPRETEiJ_G0025142	-	80	63.774	ENSGMOG00000008489	myef2	62	63.774	Gadus_morhua
MGP_SPRETEiJ_G0025142	-	86	74.138	ENSGALG00000032546	MYEF2	63	70.701	Gallus_gallus
MGP_SPRETEiJ_G0025142	-	89	61.168	ENSGAFG00000005838	myef2	67	61.168	Gambusia_affinis
MGP_SPRETEiJ_G0025142	-	89	63.668	ENSGACG00000016759	myef2	65	66.418	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0025142	-	99	66.765	ENSGAGG00000015265	MYEF2	76	66.765	Gopherus_agassizii
MGP_SPRETEiJ_G0025142	-	99	78.419	ENSGGOG00000014968	MYEF2	69	82.143	Gorilla_gorilla
MGP_SPRETEiJ_G0025142	-	89	64.483	ENSHBUG00000015847	myef2	66	64.483	Haplochromis_burtoni
MGP_SPRETEiJ_G0025142	-	99	79.448	ENSHGLG00000018166	MYEF2	71	79.448	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025142	-	82	85.338	ENSHGLG00100014102	MYEF2	65	85.338	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025142	-	84	63.082	ENSHCOG00000001652	myef2	63	64.158	Hippocampus_comes
MGP_SPRETEiJ_G0025142	-	90	63.287	ENSIPUG00000018589	myef2	66	63.287	Ictalurus_punctatus
MGP_SPRETEiJ_G0025142	-	84	84.000	ENSSTOG00000007740	MYEF2	68	84.000	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025142	-	82	85.283	ENSJJAG00000015428	-	65	85.283	Jaculus_jaculus
MGP_SPRETEiJ_G0025142	-	89	64.261	ENSKMAG00000002383	myef2	71	64.261	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0025142	-	84	63.100	ENSLBEG00000005649	myef2	65	61.672	Labrus_bergylta
MGP_SPRETEiJ_G0025142	-	86	72.954	ENSLACG00000006382	MYEF2	58	73.260	Latimeria_chalumnae
MGP_SPRETEiJ_G0025142	-	93	68.771	ENSLOCG00000013241	myef2	67	68.771	Lepisosteus_oculatus
MGP_SPRETEiJ_G0025142	-	99	80.488	ENSLAFG00000012990	MYEF2	68	80.488	Loxodonta_africana
MGP_SPRETEiJ_G0025142	-	99	78.116	ENSMFAG00000046361	MYEF2	71	81.786	Macaca_fascicularis
MGP_SPRETEiJ_G0025142	-	99	78.419	ENSMMUG00000018834	MYEF2	76	77.246	Macaca_mulatta
MGP_SPRETEiJ_G0025142	-	99	78.116	ENSMNEG00000028845	MYEF2	71	81.786	Macaca_nemestrina
MGP_SPRETEiJ_G0025142	-	99	78.116	ENSMLEG00000038724	MYEF2	71	81.786	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025142	-	86	65.603	ENSMAMG00000011476	myef2	66	64.041	Mastacembelus_armatus
MGP_SPRETEiJ_G0025142	-	89	64.483	ENSMZEG00005011832	myef2	63	64.483	Maylandia_zebra
MGP_SPRETEiJ_G0025142	-	84	73.145	ENSMGAG00000006915	MYEF2	66	73.145	Meleagris_gallopavo
MGP_SPRETEiJ_G0025142	-	99	87.500	ENSMAUG00000019642	-	71	87.500	Mesocricetus_auratus
MGP_SPRETEiJ_G0025142	-	99	79.091	ENSMICG00000014513	MYEF2	70	82.857	Microcebus_murinus
MGP_SPRETEiJ_G0025142	-	99	86.875	ENSMOCG00000006917	-	70	86.875	Microtus_ochrogaster
MGP_SPRETEiJ_G0025142	-	80	66.288	ENSMMOG00000021557	myef2	69	62.500	Mola_mola
MGP_SPRETEiJ_G0025142	-	74	66.518	ENSMALG00000012193	myef2	60	66.518	Monopterus_albus
MGP_SPRETEiJ_G0025142	-	99	89.062	MGP_CAROLIEiJ_G0024222	Myef2	73	89.062	Mus_caroli
MGP_SPRETEiJ_G0025142	-	99	89.375	ENSMUSG00000049230	Gm9833	64	89.375	Mus_musculus
MGP_SPRETEiJ_G0025142	-	99	89.375	ENSMUSG00000027201	Myef2	73	89.375	Mus_musculus
MGP_SPRETEiJ_G0025142	-	99	99.650	MGP_PahariEiJ_G0025668	-	80	99.650	Mus_pahari
MGP_SPRETEiJ_G0025142	-	99	89.062	MGP_PahariEiJ_G0025667	Myef2	73	89.062	Mus_pahari
MGP_SPRETEiJ_G0025142	-	85	82.734	ENSMPUG00000011254	MYEF2	51	82.734	Mustela_putorius_furo
MGP_SPRETEiJ_G0025142	-	84	83.094	ENSMLUG00000006781	MYEF2	60	83.094	Myotis_lucifugus
MGP_SPRETEiJ_G0025142	-	99	83.801	ENSNGAG00000010756	-	71	83.801	Nannospalax_galili
MGP_SPRETEiJ_G0025142	-	82	67.293	ENSNBRG00000023602	myef2	65	66.071	Neolamprologus_brichardi
MGP_SPRETEiJ_G0025142	-	99	77.508	ENSNLEG00000005951	MYEF2	69	81.786	Nomascus_leucogenys
MGP_SPRETEiJ_G0025142	-	89	73.103	ENSMEUG00000015210	-	71	70.347	Notamacropus_eugenii
MGP_SPRETEiJ_G0025142	-	99	71.257	ENSOPRG00000003919	MYEF2	55	73.252	Ochotona_princeps
MGP_SPRETEiJ_G0025142	-	99	79.448	ENSODEG00000007463	MYEF2	71	79.448	Octodon_degus
MGP_SPRETEiJ_G0025142	-	89	64.483	ENSONIG00000013374	myef2	54	64.483	Oreochromis_niloticus
MGP_SPRETEiJ_G0025142	-	84	74.182	ENSOANG00000007375	MYEF2	55	74.182	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0025142	-	94	78.864	ENSOCUG00000013043	MYEF2	66	81.410	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025142	-	89	62.543	ENSORLG00000002730	myef2	64	62.543	Oryzias_latipes
MGP_SPRETEiJ_G0025142	-	89	62.543	ENSORLG00020021524	myef2	68	62.543	Oryzias_latipes_hni
MGP_SPRETEiJ_G0025142	-	89	62.887	ENSORLG00015020877	myef2	64	62.887	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0025142	-	91	61.824	ENSOMEG00000010072	myef2	76	62.373	Oryzias_melastigma
MGP_SPRETEiJ_G0025142	-	99	79.394	ENSOGAG00000010907	MYEF2	68	79.394	Otolemur_garnettii
MGP_SPRETEiJ_G0025142	-	85	83.094	ENSOARG00000021027	MYEF2	65	83.094	Ovis_aries
MGP_SPRETEiJ_G0025142	-	93	79.000	ENSPPAG00000041556	MYEF2	71	81.786	Pan_paniscus
MGP_SPRETEiJ_G0025142	-	99	77.246	ENSPPRG00000011446	MYEF2	71	79.939	Panthera_pardus
MGP_SPRETEiJ_G0025142	-	84	84.926	ENSPTIG00000018122	MYEF2	65	84.926	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025142	-	99	78.116	ENSPTRG00000007042	MYEF2	71	78.116	Pan_troglodytes
MGP_SPRETEiJ_G0025142	-	99	78.116	ENSPANG00000017757	MYEF2	71	81.786	Papio_anubis
MGP_SPRETEiJ_G0025142	-	57	61.905	ENSPKIG00000020643	myef2	50	61.905	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025142	-	83	66.667	ENSPKIG00000018344	MYEF2	74	66.667	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025142	-	86	74.570	ENSPSIG00000016637	MYEF2	65	74.315	Pelodiscus_sinensis
MGP_SPRETEiJ_G0025142	-	85	60.650	ENSPMGG00000001513	myef2	58	60.650	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025142	-	82	85.818	ENSPEMG00000006286	-	67	85.818	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025142	-	99	75.375	ENSPCIG00000022902	MYEF2	72	75.676	Phascolarctos_cinereus
MGP_SPRETEiJ_G0025142	-	89	61.168	ENSPFOG00000001754	myef2	61	61.168	Poecilia_formosa
MGP_SPRETEiJ_G0025142	-	82	63.433	ENSPLAG00000001814	MYEF2	63	63.806	Poecilia_latipinna
MGP_SPRETEiJ_G0025142	-	89	60.825	ENSPLAG00000001538	myef2	65	61.168	Poecilia_latipinna
MGP_SPRETEiJ_G0025142	-	89	60.825	ENSPMEG00000014953	MYEF2	65	61.168	Poecilia_mexicana
MGP_SPRETEiJ_G0025142	-	89	60.825	ENSPMEG00000014250	myef2	65	61.168	Poecilia_mexicana
MGP_SPRETEiJ_G0025142	-	89	61.672	ENSPREG00000010801	myef2	70	61.592	Poecilia_reticulata
MGP_SPRETEiJ_G0025142	-	99	78.116	ENSPPYG00000006452	MYEF2	68	78.116	Pongo_abelii
MGP_SPRETEiJ_G0025142	-	99	78.354	ENSPCAG00000016660	MYEF2	69	78.354	Procavia_capensis
MGP_SPRETEiJ_G0025142	-	99	79.394	ENSPCOG00000024570	MYEF2	69	82.857	Propithecus_coquereli
MGP_SPRETEiJ_G0025142	-	99	79.939	ENSPVAG00000004102	MYEF2	60	79.939	Pteropus_vampyrus
MGP_SPRETEiJ_G0025142	-	82	66.917	ENSPNYG00000010879	myef2	64	66.917	Pundamilia_nyererei
MGP_SPRETEiJ_G0025142	-	99	59.568	ENSPNAG00000026387	myef2	61	63.823	Pygocentrus_nattereri
MGP_SPRETEiJ_G0025142	-	99	87.812	ENSRNOG00000005258	Myef2	68	87.812	Rattus_norvegicus
MGP_SPRETEiJ_G0025142	-	99	78.419	ENSRBIG00000037503	MYEF2	71	78.419	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025142	-	99	78.419	ENSRROG00000042861	MYEF2	71	78.419	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025142	-	84	84.000	ENSSBOG00000029634	MYEF2	68	84.000	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025142	-	84	82.909	ENSSHAG00000011695	MYEF2	65	82.909	Sarcophilus_harrisii
MGP_SPRETEiJ_G0025142	-	86	65.614	ENSSFOG00015012981	myef2	68	65.614	Scleropages_formosus
MGP_SPRETEiJ_G0025142	-	82	67.293	ENSSMAG00000021279	myef2	75	67.293	Scophthalmus_maximus
MGP_SPRETEiJ_G0025142	-	92	62.829	ENSSDUG00000015983	myef2	76	62.829	Seriola_dumerili
MGP_SPRETEiJ_G0025142	-	60	77.561	ENSSARG00000003264	MYEF2	60	77.561	Sorex_araneus
MGP_SPRETEiJ_G0025142	-	86	74.394	ENSSPUG00000011966	MYEF2	56	69.969	Sphenodon_punctatus
MGP_SPRETEiJ_G0025142	-	89	63.481	ENSSPAG00000021514	myef2	68	64.460	Stegastes_partitus
MGP_SPRETEiJ_G0025142	-	99	79.635	ENSSSCG00000004661	MYEF2	71	79.635	Sus_scrofa
MGP_SPRETEiJ_G0025142	-	84	71.986	ENSTGUG00000007130	MYEF2	66	72.183	Taeniopygia_guttata
MGP_SPRETEiJ_G0025142	-	81	67.803	ENSTRUG00000016967	myef2	58	67.803	Takifugu_rubripes
MGP_SPRETEiJ_G0025142	-	89	63.918	ENSTNIG00000009526	myef2	72	63.918	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0025142	-	97	80.189	ENSTTRG00000008076	MYEF2	67	80.189	Tursiops_truncatus
MGP_SPRETEiJ_G0025142	-	99	76.106	ENSUAMG00000020099	MYEF2	75	78.743	Ursus_americanus
MGP_SPRETEiJ_G0025142	-	97	75.079	ENSUMAG00000009804	MYEF2	69	84.274	Ursus_maritimus
MGP_SPRETEiJ_G0025142	-	84	84.000	ENSVPAG00000004721	MYEF2	65	84.000	Vicugna_pacos
MGP_SPRETEiJ_G0025142	-	84	82.206	ENSVVUG00000014591	MYEF2	65	82.206	Vulpes_vulpes
MGP_SPRETEiJ_G0025142	-	86	67.820	ENSXETG00000018412	myef2	58	68.750	Xenopus_tropicalis
MGP_SPRETEiJ_G0025142	-	89	61.458	ENSXMAG00000016686	myef2	66	61.806	Xiphophorus_maculatus