EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025171 (Gene tree)
Gene ID: -
Gene Symbol: Ciao1
Alias: Wdr39
Full Name: cytosolic iron-sulfur protein assembly 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 7354 bases
Position: chr2:127904216-127911569
Accession: 1346998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0056529	eIF2A	PF08662.11	0.0003	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0056527	-	3560	-	MGP_SPRETEiJ_P0056527	339 (aa)	-	UPI0000020D77
MGP_SPRETEiJ_T0056529	-	531	-	MGP_SPRETEiJ_P0056529	176 (aa)	-	UPI00021CF720
MGP_SPRETEiJ_T0056528	-	581	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0056530	-	409	-	MGP_SPRETEiJ_P0056530	51 (aa)	-	UPI00021CF721

Gene Model

Click here to download MGP_SPRETEiJ_G0025171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025171's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0025171	Ciao1	85	34.058	MGP_SPRETEiJ_G0021608	Wdr5b	85	34.058
MGP_SPRETEiJ_G0025171	Ciao1	91	36.735	MGP_SPRETEiJ_G0024260	Wdr5	90	36.735
MGP_SPRETEiJ_G0025171	Ciao1	84	32.331	MGP_SPRETEiJ_G0022110	Tbl3	55	30.714
MGP_SPRETEiJ_G0025171	Ciao1	85	35.354	MGP_SPRETEiJ_G0033763	Poc1a	80	35.354

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025171	Ciao1	96	62.874	ENSCING00000006781	-	99	62.874	Ciona_intestinalis
MGP_SPRETEiJ_G0025171	Ciao1	96	61.677	ENSCSAVG00000003355	-	99	61.677	Ciona_savignyi
MGP_SPRETEiJ_G0025171	Ciao1	99	96.571	ENSCGRG00001016622	Ciao1	99	96.571	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025171	Ciao1	94	79.518	ENSMZEG00005010812	ciao1	100	79.518	Maylandia_zebra
MGP_SPRETEiJ_G0025171	Ciao1	99	97.143	ENSMAUG00000021994	Ciao1	99	97.143	Mesocricetus_auratus
MGP_SPRETEiJ_G0025171	Ciao1	100	96.023	ENSMOCG00000009518	Ciao1	99	96.023	Microtus_ochrogaster
MGP_SPRETEiJ_G0025171	Ciao1	94	82.530	ENSMALG00000002097	ciao1	99	82.530	Monopterus_albus
MGP_SPRETEiJ_G0025171	Ciao1	100	99.432	MGP_CAROLIEiJ_G0024251	Ciao1	100	99.432	Mus_caroli
MGP_SPRETEiJ_G0025171	Ciao1	100	100.000	ENSMUSG00000003662	Ciao1	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0025171	Ciao1	100	97.159	MGP_PahariEiJ_G0025696	Ciao1	100	97.159	Mus_pahari
MGP_SPRETEiJ_G0025171	Ciao1	99	96.571	ENSPEMG00000015800	Ciao1	99	96.571	Peromyscus_maniculatus_bairdii