EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025196 (Gene tree)
Gene ID: -
Gene Symbol: Zc3h8
Alias: E130108N08Rik|Fliz1
Full Name: zinc finger CCCH type containing 8
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 17764 bases
Position: chr2:129679790-129697553
Accession: 1930128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0056626	zf-CCCH	PF00642.24	1.5e-10	1	2
MGP_SPRETEiJ_P0056626	zf-CCCH	PF00642.24	1.5e-10	2	2
MGP_SPRETEiJ_P0056626	zf-CCCH_2	PF14608.6	2.5e-05	1	3
MGP_SPRETEiJ_P0056626	zf-CCCH_2	PF14608.6	2.5e-05	2	3
MGP_SPRETEiJ_P0056626	zf-CCCH_2	PF14608.6	2.5e-05	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0056626	-	1629	-	MGP_SPRETEiJ_P0056626	305 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025196's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025196	Zc3h8	100	75.082	ENSG00000144161	ZC3H8	100	75.082	Homo_sapiens
MGP_SPRETEiJ_G0025196	Zc3h8	81	77.642	ENSAMEG00000016207	ZC3H8	99	77.642	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025196	Zc3h8	100	71.569	ENSANAG00000022151	ZC3H8	100	71.569	Aotus_nancymaae
MGP_SPRETEiJ_G0025196	Zc3h8	99	71.711	ENSBTAG00000015965	ZC3H8	99	71.711	Bos_taurus
MGP_SPRETEiJ_G0025196	Zc3h8	100	71.242	ENSCJAG00000040629	ZC3H8	100	71.242	Callithrix_jacchus
MGP_SPRETEiJ_G0025196	Zc3h8	99	76.316	ENSCAFG00000007155	ZC3H8	77	76.316	Canis_familiaris
MGP_SPRETEiJ_G0025196	Zc3h8	99	76.316	ENSCAFG00020017540	ZC3H8	92	76.316	Canis_lupus_dingo
MGP_SPRETEiJ_G0025196	Zc3h8	99	68.690	ENSCHIG00000012152	ZC3H8	99	68.690	Capra_hircus
MGP_SPRETEiJ_G0025196	Zc3h8	99	78.289	ENSTSYG00000006668	ZC3H8	99	78.289	Carlito_syrichta
MGP_SPRETEiJ_G0025196	Zc3h8	91	71.583	ENSCPOG00000008258	ZC3H8	99	71.583	Cavia_porcellus
MGP_SPRETEiJ_G0025196	Zc3h8	100	70.915	ENSCCAG00000019771	-	100	70.915	Cebus_capucinus
MGP_SPRETEiJ_G0025196	Zc3h8	100	68.852	ENSCCAG00000034286	-	100	68.852	Cebus_capucinus
MGP_SPRETEiJ_G0025196	Zc3h8	100	74.098	ENSCATG00000031295	ZC3H8	100	75.163	Cercocebus_atys
MGP_SPRETEiJ_G0025196	Zc3h8	100	71.753	ENSCLAG00000006848	ZC3H8	100	71.753	Chinchilla_lanigera
MGP_SPRETEiJ_G0025196	Zc3h8	85	72.587	ENSCSAG00000016801	ZC3H8	98	73.846	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025196	Zc3h8	90	62.681	ENSCHOG00000010391	ZC3H8	98	62.681	Choloepus_hoffmanni
MGP_SPRETEiJ_G0025196	Zc3h8	56	75.568	ENSCANG00000014691	ZC3H8	69	75.568	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025196	Zc3h8	100	89.216	ENSCGRG00001018353	Zc3h8	100	89.216	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025196	Zc3h8	100	89.216	ENSCGRG00000016191	Zc3h8	100	89.216	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025196	Zc3h8	100	73.203	ENSDORG00000029341	Zc3h8	100	73.203	Dipodomys_ordii
MGP_SPRETEiJ_G0025196	Zc3h8	79	72.193	ENSETEG00000016560	ZC3H8	81	72.193	Echinops_telfairi
MGP_SPRETEiJ_G0025196	Zc3h8	99	76.316	ENSEASG00005006490	ZC3H8	99	76.974	Equus_asinus_asinus
MGP_SPRETEiJ_G0025196	Zc3h8	99	75.658	ENSECAG00000022765	ZC3H8	99	76.645	Equus_caballus
MGP_SPRETEiJ_G0025196	Zc3h8	99	68.852	ENSEEUG00000006984	ZC3H8	99	68.852	Erinaceus_europaeus
MGP_SPRETEiJ_G0025196	Zc3h8	99	73.226	ENSFCAG00000008088	ZC3H8	99	74.194	Felis_catus
MGP_SPRETEiJ_G0025196	Zc3h8	100	73.377	ENSFDAG00000001021	ZC3H8	100	73.377	Fukomys_damarensis
MGP_SPRETEiJ_G0025196	Zc3h8	100	74.098	ENSGGOG00000009004	ZC3H8	100	74.098	Gorilla_gorilla
MGP_SPRETEiJ_G0025196	Zc3h8	100	70.927	ENSHGLG00000008367	ZC3H8	100	70.927	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025196	Zc3h8	55	78.698	ENSHGLG00100017277	-	100	78.698	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025196	Zc3h8	100	76.797	ENSSTOG00000006347	ZC3H8	100	76.797	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025196	Zc3h8	99	74.671	ENSLAFG00000004675	ZC3H8	99	74.671	Loxodonta_africana
MGP_SPRETEiJ_G0025196	Zc3h8	100	74.426	ENSMFAG00000031522	ZC3H8	100	75.490	Macaca_fascicularis
MGP_SPRETEiJ_G0025196	Zc3h8	100	74.754	ENSMMUG00000044163	ZC3H8	100	75.817	Macaca_mulatta
MGP_SPRETEiJ_G0025196	Zc3h8	100	74.426	ENSMNEG00000034502	ZC3H8	100	75.490	Macaca_nemestrina
MGP_SPRETEiJ_G0025196	Zc3h8	100	73.770	ENSMLEG00000029980	ZC3H8	100	74.837	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025196	Zc3h8	100	87.908	ENSMAUG00000012509	Zc3h8	100	87.908	Mesocricetus_auratus
MGP_SPRETEiJ_G0025196	Zc3h8	100	77.778	ENSMICG00000045551	ZC3H8	100	78.758	Microcebus_murinus
MGP_SPRETEiJ_G0025196	Zc3h8	100	87.541	ENSMOCG00000015035	Zc3h8	100	87.541	Microtus_ochrogaster
MGP_SPRETEiJ_G0025196	Zc3h8	100	97.705	MGP_CAROLIEiJ_G0024276	Zc3h8	100	97.705	Mus_caroli
MGP_SPRETEiJ_G0025196	Zc3h8	100	99.344	ENSMUSG00000027387	Zc3h8	100	99.344	Mus_musculus
MGP_SPRETEiJ_G0025196	Zc3h8	100	97.377	MGP_PahariEiJ_G0025721	Zc3h8	100	97.377	Mus_pahari
MGP_SPRETEiJ_G0025196	Zc3h8	99	75.484	ENSMPUG00000009562	ZC3H8	99	75.484	Mustela_putorius_furo
MGP_SPRETEiJ_G0025196	Zc3h8	90	68.929	ENSMLUG00000004890	ZC3H8	100	69.504	Myotis_lucifugus
MGP_SPRETEiJ_G0025196	Zc3h8	100	83.987	ENSNGAG00000010427	Zc3h8	100	83.987	Nannospalax_galili
MGP_SPRETEiJ_G0025196	Zc3h8	100	76.393	ENSNLEG00000001619	ZC3H8	100	76.393	Nomascus_leucogenys
MGP_SPRETEiJ_G0025196	Zc3h8	90	68.364	ENSOPRG00000011183	ZC3H8	99	68.364	Ochotona_princeps
MGP_SPRETEiJ_G0025196	Zc3h8	100	72.876	ENSODEG00000006594	ZC3H8	100	72.876	Octodon_degus
MGP_SPRETEiJ_G0025196	Zc3h8	99	73.927	ENSOCUG00000011253	ZC3H8	88	73.927	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025196	Zc3h8	100	73.077	ENSOGAG00000002554	ZC3H8	100	73.077	Otolemur_garnettii
MGP_SPRETEiJ_G0025196	Zc3h8	99	73.026	ENSOARG00000014475	ZC3H8	99	73.026	Ovis_aries
MGP_SPRETEiJ_G0025196	Zc3h8	100	74.754	ENSPPAG00000028071	ZC3H8	100	74.754	Pan_paniscus
MGP_SPRETEiJ_G0025196	Zc3h8	99	73.548	ENSPPRG00000005648	ZC3H8	99	74.516	Panthera_pardus
MGP_SPRETEiJ_G0025196	Zc3h8	99	73.548	ENSPTIG00000016697	ZC3H8	99	74.516	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025196	Zc3h8	100	74.754	ENSPTRG00000012362	ZC3H8	100	74.754	Pan_troglodytes
MGP_SPRETEiJ_G0025196	Zc3h8	100	74.098	ENSPANG00000016995	ZC3H8	100	75.163	Papio_anubis
MGP_SPRETEiJ_G0025196	Zc3h8	97	84.967	ENSPEMG00000011068	Zc3h8	97	84.967	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025196	Zc3h8	99	74.671	ENSPPYG00000012165	ZC3H8	99	74.671	Pongo_abelii
MGP_SPRETEiJ_G0025196	Zc3h8	100	56.863	ENSPCAG00000015426	ZC3H8	100	56.863	Procavia_capensis
MGP_SPRETEiJ_G0025196	Zc3h8	100	79.412	ENSPCOG00000021690	ZC3H8	100	79.412	Propithecus_coquereli
MGP_SPRETEiJ_G0025196	Zc3h8	74	77.515	ENSPVAG00000003510	ZC3H8	76	77.515	Pteropus_vampyrus
MGP_SPRETEiJ_G0025196	Zc3h8	100	90.492	ENSRNOG00000017647	Zc3h8	100	90.492	Rattus_norvegicus
MGP_SPRETEiJ_G0025196	Zc3h8	100	75.163	ENSRBIG00000027345	ZC3H8	100	75.163	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025196	Zc3h8	100	75.490	ENSRROG00000039459	ZC3H8	100	75.490	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025196	Zc3h8	100	68.269	ENSSBOG00000028167	ZC3H8	100	68.269	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025196	Zc3h8	91	67.742	ENSSARG00000012883	ZC3H8	99	67.742	Sorex_araneus
MGP_SPRETEiJ_G0025196	Zc3h8	85	72.137	ENSSSCG00000008099	ZC3H8	97	72.519	Sus_scrofa
MGP_SPRETEiJ_G0025196	Zc3h8	59	80.000	ENSTBEG00000015547	-	68	80.000	Tupaia_belangeri
MGP_SPRETEiJ_G0025196	Zc3h8	85	74.525	ENSTTRG00000013153	ZC3H8	85	74.525	Tursiops_truncatus
MGP_SPRETEiJ_G0025196	Zc3h8	99	76.645	ENSUAMG00000002411	ZC3H8	99	76.645	Ursus_americanus
MGP_SPRETEiJ_G0025196	Zc3h8	99	77.632	ENSUMAG00000008665	ZC3H8	99	77.632	Ursus_maritimus
MGP_SPRETEiJ_G0025196	Zc3h8	100	75.817	ENSVPAG00000005911	ZC3H8	100	76.797	Vicugna_pacos
MGP_SPRETEiJ_G0025196	Zc3h8	99	75.987	ENSVVUG00000028659	ZC3H8	99	75.987	Vulpes_vulpes