EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025264 (Gene tree)
Gene ID: -
Gene Symbol: Trmt6
Alias: 3300001M20Rik
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 11798 bases
Position: chr2:133772885-133784682
Accession: 1914176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0056934	Gcd10p	PF04189.13	2.5e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0056932	-	2947	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0056933	-	4146	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0056936	-	641	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0056937	-	622	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0056934	-	2827	-	MGP_SPRETEiJ_P0056934	497 (aa)	-	-
MGP_SPRETEiJ_T0056935	-	458	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025264	Trmt6	100	85.542	ENSG00000089195	TRMT6	100	85.542	Homo_sapiens
MGP_SPRETEiJ_G0025264	Trmt6	96	58.193	ENSAPOG00000008036	trmt6	98	59.081	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025264	Trmt6	100	85.341	ENSAMEG00000010635	TRMT6	100	85.341	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025264	Trmt6	96	54.832	ENSACIG00000004608	trmt6	97	54.832	Amphilophus_citrinellus
MGP_SPRETEiJ_G0025264	Trmt6	96	57.143	ENSAOCG00000024322	trmt6	97	57.143	Amphiprion_ocellaris
MGP_SPRETEiJ_G0025264	Trmt6	96	58.824	ENSAPEG00000017334	trmt6	98	58.455	Amphiprion_percula
MGP_SPRETEiJ_G0025264	Trmt6	91	57.768	ENSATEG00000018498	trmt6	97	58.862	Anabas_testudineus
MGP_SPRETEiJ_G0025264	Trmt6	92	72.985	ENSAPLG00000007761	TRMT6	99	72.985	Anas_platyrhynchos
MGP_SPRETEiJ_G0025264	Trmt6	96	66.180	ENSACAG00000000575	TRMT6	98	66.180	Anolis_carolinensis
MGP_SPRETEiJ_G0025264	Trmt6	100	84.739	ENSANAG00000021260	TRMT6	100	84.739	Aotus_nancymaae
MGP_SPRETEiJ_G0025264	Trmt6	95	56.513	ENSACLG00000026034	trmt6	95	56.513	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025264	Trmt6	96	58.333	ENSAMXG00000017116	trmt6	96	58.714	Astyanax_mexicanus
MGP_SPRETEiJ_G0025264	Trmt6	99	85.657	ENSBTAG00000001314	TRMT6	99	85.657	Bos_taurus
MGP_SPRETEiJ_G0025264	Trmt6	100	84.538	ENSCJAG00000021296	TRMT6	100	84.538	Callithrix_jacchus
MGP_SPRETEiJ_G0025264	Trmt6	99	85.366	ENSCAFG00000005969	TRMT6	99	85.366	Canis_familiaris
MGP_SPRETEiJ_G0025264	Trmt6	99	85.366	ENSCAFG00020000777	TRMT6	99	85.366	Canis_lupus_dingo
MGP_SPRETEiJ_G0025264	Trmt6	99	85.253	ENSCHIG00000010338	TRMT6	99	85.253	Capra_hircus
MGP_SPRETEiJ_G0025264	Trmt6	99	85.425	ENSTSYG00000004286	TRMT6	99	85.425	Carlito_syrichta
MGP_SPRETEiJ_G0025264	Trmt6	83	85.507	ENSCAPG00000015467	TRMT6	93	85.507	Cavia_aperea
MGP_SPRETEiJ_G0025264	Trmt6	99	84.413	ENSCPOG00000013809	TRMT6	99	84.413	Cavia_porcellus
MGP_SPRETEiJ_G0025264	Trmt6	100	84.538	ENSCCAG00000026939	TRMT6	100	84.538	Cebus_capucinus
MGP_SPRETEiJ_G0025264	Trmt6	100	84.739	ENSCATG00000041111	TRMT6	100	84.739	Cercocebus_atys
MGP_SPRETEiJ_G0025264	Trmt6	100	85.141	ENSCLAG00000013978	TRMT6	100	85.141	Chinchilla_lanigera
MGP_SPRETEiJ_G0025264	Trmt6	100	84.739	ENSCSAG00000013461	TRMT6	100	84.739	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025264	Trmt6	83	74.659	ENSCHOG00000012537	TRMT6	74	74.659	Choloepus_hoffmanni
MGP_SPRETEiJ_G0025264	Trmt6	95	72.803	ENSCPBG00000023406	TRMT6	97	72.803	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025264	Trmt6	90	34.698	ENSCING00000002472	-	96	34.076	Ciona_intestinalis
MGP_SPRETEiJ_G0025264	Trmt6	87	39.503	ENSCSAVG00000001680	-	94	39.070	Ciona_savignyi
MGP_SPRETEiJ_G0025264	Trmt6	100	84.538	ENSCANG00000002381	TRMT6	100	84.538	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025264	Trmt6	100	91.751	ENSCGRG00001003385	Trmt6	100	91.751	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025264	Trmt6	100	91.751	ENSCGRG00000006540	Trmt6	100	91.751	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025264	Trmt6	96	58.455	ENSCSEG00000002228	trmt6	97	58.577	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0025264	Trmt6	96	56.173	ENSCVAG00000000341	trmt6	98	56.173	Cyprinodon_variegatus
MGP_SPRETEiJ_G0025264	Trmt6	97	57.676	ENSDARG00000042344	trmt6	97	57.676	Danio_rerio
MGP_SPRETEiJ_G0025264	Trmt6	100	78.895	ENSDNOG00000012785	TRMT6	100	78.895	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025264	Trmt6	98	86.708	ENSDORG00000006458	Trmt6	99	86.708	Dipodomys_ordii
MGP_SPRETEiJ_G0025264	Trmt6	60	91.667	ENSETEG00000003490	-	60	91.667	Echinops_telfairi
MGP_SPRETEiJ_G0025264	Trmt6	65	48.000	ENSETEG00000017282	-	95	48.000	Echinops_telfairi
MGP_SPRETEiJ_G0025264	Trmt6	97	86.279	ENSEASG00005001411	TRMT6	99	85.772	Equus_asinus_asinus
MGP_SPRETEiJ_G0025264	Trmt6	97	85.655	ENSECAG00000023914	TRMT6	99	84.818	Equus_caballus
MGP_SPRETEiJ_G0025264	Trmt6	99	83.232	ENSEEUG00000006635	TRMT6	99	83.232	Erinaceus_europaeus
MGP_SPRETEiJ_G0025264	Trmt6	95	57.971	ENSELUG00000013378	trmt6	78	59.780	Esox_lucius
MGP_SPRETEiJ_G0025264	Trmt6	99	85.801	ENSFCAG00000003102	TRMT6	99	85.801	Felis_catus
MGP_SPRETEiJ_G0025264	Trmt6	90	72.788	ENSFALG00000013575	TRMT6	97	72.566	Ficedula_albicollis
MGP_SPRETEiJ_G0025264	Trmt6	99	86.263	ENSFDAG00000015117	TRMT6	99	86.263	Fukomys_damarensis
MGP_SPRETEiJ_G0025264	Trmt6	95	56.356	ENSFHEG00000019957	trmt6	97	56.144	Fundulus_heteroclitus
MGP_SPRETEiJ_G0025264	Trmt6	81	64.173	ENSGMOG00000011059	trmt6	97	64.173	Gadus_morhua
MGP_SPRETEiJ_G0025264	Trmt6	95	70.947	ENSGALG00000009169	TRMT6	97	70.947	Gallus_gallus
MGP_SPRETEiJ_G0025264	Trmt6	96	55.925	ENSGAFG00000008618	trmt6	97	55.925	Gambusia_affinis
MGP_SPRETEiJ_G0025264	Trmt6	96	56.485	ENSGACG00000012471	trmt6	96	57.322	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0025264	Trmt6	95	72.594	ENSGAGG00000008464	TRMT6	98	72.747	Gopherus_agassizii
MGP_SPRETEiJ_G0025264	Trmt6	100	85.743	ENSGGOG00000008597	TRMT6	100	85.743	Gorilla_gorilla
MGP_SPRETEiJ_G0025264	Trmt6	95	56.513	ENSHBUG00000016631	trmt6	96	56.513	Haplochromis_burtoni
MGP_SPRETEiJ_G0025264	Trmt6	99	85.253	ENSHGLG00000015405	TRMT6	99	85.253	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025264	Trmt6	99	85.253	ENSHGLG00100004120	TRMT6	99	85.253	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025264	Trmt6	96	57.143	ENSHCOG00000000118	trmt6	97	57.143	Hippocampus_comes
MGP_SPRETEiJ_G0025264	Trmt6	95	59.916	ENSIPUG00000019365	trmt6	97	60.127	Ictalurus_punctatus
MGP_SPRETEiJ_G0025264	Trmt6	100	86.318	ENSSTOG00000006863	TRMT6	100	86.318	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025264	Trmt6	99	85.425	ENSJJAG00000007315	Trmt6	99	85.425	Jaculus_jaculus
MGP_SPRETEiJ_G0025264	Trmt6	95	55.882	ENSKMAG00000001295	trmt6	97	58.351	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0025264	Trmt6	96	57.023	ENSLBEG00000025654	trmt6	97	57.023	Labrus_bergylta
MGP_SPRETEiJ_G0025264	Trmt6	96	67.364	ENSLACG00000016478	TRMT6	96	67.364	Latimeria_chalumnae
MGP_SPRETEiJ_G0025264	Trmt6	96	63.333	ENSLOCG00000016451	trmt6	97	63.312	Lepisosteus_oculatus
MGP_SPRETEiJ_G0025264	Trmt6	99	83.903	ENSLAFG00000032216	TRMT6	99	83.903	Loxodonta_africana
MGP_SPRETEiJ_G0025264	Trmt6	100	84.940	ENSMFAG00000044360	TRMT6	100	84.940	Macaca_fascicularis
MGP_SPRETEiJ_G0025264	Trmt6	100	84.940	ENSMMUG00000013728	TRMT6	100	84.940	Macaca_mulatta
MGP_SPRETEiJ_G0025264	Trmt6	100	84.739	ENSMNEG00000041831	TRMT6	100	84.739	Macaca_nemestrina
MGP_SPRETEiJ_G0025264	Trmt6	100	84.940	ENSMLEG00000040762	TRMT6	100	84.940	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025264	Trmt6	96	56.073	ENSMAMG00000012101	trmt6	98	59.167	Mastacembelus_armatus
MGP_SPRETEiJ_G0025264	Trmt6	95	56.513	ENSMZEG00005010771	trmt6	95	56.513	Maylandia_zebra
MGP_SPRETEiJ_G0025264	Trmt6	95	70.947	ENSMGAG00000007678	TRMT6	96	70.947	Meleagris_gallopavo
MGP_SPRETEiJ_G0025264	Trmt6	100	91.751	ENSMAUG00000008719	Trmt6	100	91.751	Mesocricetus_auratus
MGP_SPRETEiJ_G0025264	Trmt6	96	86.458	ENSMICG00000011626	TRMT6	99	85.425	Microcebus_murinus
MGP_SPRETEiJ_G0025264	Trmt6	100	91.549	ENSMOCG00000022320	Trmt6	100	91.549	Microtus_ochrogaster
MGP_SPRETEiJ_G0025264	Trmt6	96	55.765	ENSMMOG00000004412	trmt6	97	55.765	Mola_mola
MGP_SPRETEiJ_G0025264	Trmt6	97	75.876	ENSMODG00000003784	TRMT6	97	75.876	Monodelphis_domestica
MGP_SPRETEiJ_G0025264	Trmt6	96	54.071	ENSMALG00000018140	trmt6	96	54.071	Monopterus_albus
MGP_SPRETEiJ_G0025264	Trmt6	100	96.982	MGP_CAROLIEiJ_G0024344	Trmt6	100	96.982	Mus_caroli
MGP_SPRETEiJ_G0025264	Trmt6	100	98.390	ENSMUSG00000037376	Trmt6	100	98.390	Mus_musculus
MGP_SPRETEiJ_G0025264	Trmt6	100	96.177	MGP_PahariEiJ_G0025789	Trmt6	100	96.177	Mus_pahari
MGP_SPRETEiJ_G0025264	Trmt6	87	85.747	ENSMPUG00000006317	TRMT6	93	85.747	Mustela_putorius_furo
MGP_SPRETEiJ_G0025264	Trmt6	97	85.655	ENSMLUG00000006491	TRMT6	100	84.538	Myotis_lucifugus
MGP_SPRETEiJ_G0025264	Trmt6	100	86.373	ENSNGAG00000015251	Trmt6	100	86.373	Nannospalax_galili
MGP_SPRETEiJ_G0025264	Trmt6	95	53.586	ENSNBRG00000020261	trmt6	96	53.586	Neolamprologus_brichardi
MGP_SPRETEiJ_G0025264	Trmt6	100	84.940	ENSNLEG00000013957	TRMT6	100	84.940	Nomascus_leucogenys
MGP_SPRETEiJ_G0025264	Trmt6	84	77.804	ENSMEUG00000009179	TRMT6	99	77.804	Notamacropus_eugenii
MGP_SPRETEiJ_G0025264	Trmt6	96	83.368	ENSOPRG00000008564	TRMT6	98	83.368	Ochotona_princeps
MGP_SPRETEiJ_G0025264	Trmt6	100	84.940	ENSODEG00000005657	TRMT6	100	84.940	Octodon_degus
MGP_SPRETEiJ_G0025264	Trmt6	95	56.842	ENSONIG00000000968	trmt6	96	56.842	Oreochromis_niloticus
MGP_SPRETEiJ_G0025264	Trmt6	91	76.484	ENSOANG00000008403	-	99	76.484	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0025264	Trmt6	99	85.020	ENSOCUG00000014669	TRMT6	99	85.020	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025264	Trmt6	95	55.115	ENSORLG00000009862	trmt6	97	52.818	Oryzias_latipes
MGP_SPRETEiJ_G0025264	Trmt6	95	55.115	ENSORLG00020001466	trmt6	97	52.818	Oryzias_latipes_hni
MGP_SPRETEiJ_G0025264	Trmt6	95	55.833	ENSORLG00015015552	trmt6	97	53.750	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0025264	Trmt6	96	54.792	ENSOMEG00000019874	trmt6	97	55.417	Oryzias_melastigma
MGP_SPRETEiJ_G0025264	Trmt6	97	85.062	ENSOGAG00000012950	TRMT6	98	84.178	Otolemur_garnettii
MGP_SPRETEiJ_G0025264	Trmt6	99	85.455	ENSOARG00000017993	TRMT6	99	85.455	Ovis_aries
MGP_SPRETEiJ_G0025264	Trmt6	100	84.970	ENSPPAG00000036809	TRMT6	100	84.970	Pan_paniscus
MGP_SPRETEiJ_G0025264	Trmt6	99	86.004	ENSPPRG00000000424	TRMT6	99	86.004	Panthera_pardus
MGP_SPRETEiJ_G0025264	Trmt6	99	86.004	ENSPTIG00000010629	TRMT6	99	86.004	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025264	Trmt6	100	85.542	ENSPTRG00000013231	TRMT6	100	85.542	Pan_troglodytes
MGP_SPRETEiJ_G0025264	Trmt6	100	84.940	ENSPANG00000009284	TRMT6	100	84.940	Papio_anubis
MGP_SPRETEiJ_G0025264	Trmt6	96	60.042	ENSPKIG00000003441	trmt6	97	58.159	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025264	Trmt6	98	71.255	ENSPSIG00000017048	TRMT6	99	71.255	Pelodiscus_sinensis
MGP_SPRETEiJ_G0025264	Trmt6	86	57.710	ENSPMGG00000021074	trmt6	96	57.642	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025264	Trmt6	97	92.516	ENSPEMG00000023268	Trmt6	100	91.365	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025264	Trmt6	100	74.704	ENSPCIG00000001546	TRMT6	99	74.704	Phascolarctos_cinereus
MGP_SPRETEiJ_G0025264	Trmt6	96	56.198	ENSPFOG00000003037	trmt6	97	56.198	Poecilia_formosa
MGP_SPRETEiJ_G0025264	Trmt6	96	56.576	ENSPLAG00000005143	trmt6	97	56.576	Poecilia_latipinna
MGP_SPRETEiJ_G0025264	Trmt6	96	56.576	ENSPMEG00000014875	trmt6	97	56.576	Poecilia_mexicana
MGP_SPRETEiJ_G0025264	Trmt6	96	54.622	ENSPREG00000016227	trmt6	96	54.622	Poecilia_reticulata
MGP_SPRETEiJ_G0025264	Trmt6	100	85.341	ENSPPYG00000010691	TRMT6	100	85.341	Pongo_abelii
MGP_SPRETEiJ_G0025264	Trmt6	99	82.892	ENSPCAG00000012098	TRMT6	99	82.892	Procavia_capensis
MGP_SPRETEiJ_G0025264	Trmt6	97	86.307	ENSPCOG00000020723	TRMT6	99	85.455	Propithecus_coquereli
MGP_SPRETEiJ_G0025264	Trmt6	99	81.452	ENSPVAG00000007539	TRMT6	99	81.452	Pteropus_vampyrus
MGP_SPRETEiJ_G0025264	Trmt6	95	55.814	ENSPNYG00000000918	trmt6	97	55.814	Pundamilia_nyererei
MGP_SPRETEiJ_G0025264	Trmt6	96	59.667	ENSPNAG00000019279	trmt6	96	59.667	Pygocentrus_nattereri
MGP_SPRETEiJ_G0025264	Trmt6	100	93.360	ENSRNOG00000021270	Trmt6	100	93.360	Rattus_norvegicus
MGP_SPRETEiJ_G0025264	Trmt6	100	83.735	ENSRBIG00000031132	TRMT6	100	83.735	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025264	Trmt6	100	84.940	ENSRROG00000045329	TRMT6	100	84.940	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025264	Trmt6	53	36.154	YNL062C	GCD10	55	36.154	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0025264	Trmt6	85	84.450	ENSSBOG00000019803	-	99	84.450	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025264	Trmt6	100	84.538	ENSSBOG00000033602	-	100	84.538	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025264	Trmt6	99	75.709	ENSSHAG00000010754	TRMT6	96	75.709	Sarcophilus_harrisii
MGP_SPRETEiJ_G0025264	Trmt6	96	62.680	ENSSFOG00015008429	trmt6	97	62.680	Scleropages_formosus
MGP_SPRETEiJ_G0025264	Trmt6	96	56.965	ENSSMAG00000005352	trmt6	97	57.380	Scophthalmus_maximus
MGP_SPRETEiJ_G0025264	Trmt6	96	58.750	ENSSDUG00000008294	trmt6	97	59.459	Seriola_dumerili
MGP_SPRETEiJ_G0025264	Trmt6	96	58.873	ENSSLDG00000002180	trmt6	97	59.583	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025264	Trmt6	97	80.042	ENSSARG00000005487	TRMT6	100	78.916	Sorex_araneus
MGP_SPRETEiJ_G0025264	Trmt6	96	58.910	ENSSPAG00000011628	trmt6	97	59.119	Stegastes_partitus
MGP_SPRETEiJ_G0025264	Trmt6	99	84.879	ENSSSCG00000007046	TRMT6	71	84.879	Sus_scrofa
MGP_SPRETEiJ_G0025264	Trmt6	95	72.000	ENSTGUG00000002195	TRMT6	97	73.166	Taeniopygia_guttata
MGP_SPRETEiJ_G0025264	Trmt6	95	55.158	ENSTRUG00000007153	trmt6	97	55.158	Takifugu_rubripes
MGP_SPRETEiJ_G0025264	Trmt6	95	57.708	ENSTNIG00000010726	TRMT6	96	57.708	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0025264	Trmt6	76	88.387	ENSTBEG00000016317	TRMT6	76	88.387	Tupaia_belangeri
MGP_SPRETEiJ_G0025264	Trmt6	100	85.341	ENSTTRG00000012889	TRMT6	100	85.341	Tursiops_truncatus
MGP_SPRETEiJ_G0025264	Trmt6	100	85.141	ENSUAMG00000008674	TRMT6	100	85.141	Ursus_americanus
MGP_SPRETEiJ_G0025264	Trmt6	100	85.141	ENSUMAG00000004999	TRMT6	100	85.141	Ursus_maritimus
MGP_SPRETEiJ_G0025264	Trmt6	100	84.493	ENSVPAG00000002371	TRMT6	100	84.493	Vicugna_pacos
MGP_SPRETEiJ_G0025264	Trmt6	100	84.970	ENSVVUG00000023370	TRMT6	100	84.970	Vulpes_vulpes
MGP_SPRETEiJ_G0025264	Trmt6	96	64.898	ENSXETG00000004501	trmt6	98	64.898	Xenopus_tropicalis
MGP_SPRETEiJ_G0025264	Trmt6	96	52.941	ENSXCOG00000007761	trmt6	97	52.941	Xiphophorus_couchianus
MGP_SPRETEiJ_G0025264	Trmt6	96	56.875	ENSXMAG00000008592	trmt6	97	56.875	Xiphophorus_maculatus