EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025285 (Gene tree)
Gene ID: -
Gene Symbol: Esf1
Alias: 2610101J03Rik
Full Name: ESF1 nucleolar pre-rRNA processing protein homolog
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 47762 bases
Position: chr2:141234290-141282051
Accession: 1913830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0057026	NUC153	PF08159.12	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0057030	-	532	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0057029	-	614	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0057028	-	645	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0057027	-	2222	-	MGP_SPRETEiJ_P0057027	696 (aa)	-	-
MGP_SPRETEiJ_T0057026	-	3381	-	MGP_SPRETEiJ_P0057026	840 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025285's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025285	Esf1	100	80.070	ENSG00000089048	ESF1	99	85.651	Homo_sapiens
MGP_SPRETEiJ_G0025285	Esf1	59	54.476	ENSAPOG00000003004	esf1	99	54.614	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025285	Esf1	100	77.778	ENSAMEG00000008830	ESF1	100	77.076	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025285	Esf1	76	72.000	ENSACIG00000018305	esf1	90	72.222	Amphilophus_citrinellus
MGP_SPRETEiJ_G0025285	Esf1	75	75.325	ENSAOCG00000006033	esf1	88	75.000	Amphiprion_ocellaris
MGP_SPRETEiJ_G0025285	Esf1	75	75.325	ENSAPEG00000022385	esf1	88	75.000	Amphiprion_percula
MGP_SPRETEiJ_G0025285	Esf1	76	74.324	ENSATEG00000016321	esf1	85	75.000	Anabas_testudineus
MGP_SPRETEiJ_G0025285	Esf1	100	61.502	ENSAPLG00000012113	ESF1	92	70.748	Anas_platyrhynchos
MGP_SPRETEiJ_G0025285	Esf1	98	76.667	ENSACAG00000000963	ESF1	67	79.167	Anolis_carolinensis
MGP_SPRETEiJ_G0025285	Esf1	100	78.848	ENSANAG00000036778	ESF1	100	79.201	Aotus_nancymaae
MGP_SPRETEiJ_G0025285	Esf1	80	71.429	ENSACLG00000002972	esf1	87	70.833	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025285	Esf1	75	65.385	ENSAMXG00000001172	esf1	89	66.667	Astyanax_mexicanus
MGP_SPRETEiJ_G0025285	Esf1	100	77.907	ENSBTAG00000007130	ESF1	100	77.791	Bos_taurus
MGP_SPRETEiJ_G0025285	Esf1	100	79.009	ENSCJAG00000004640	ESF1	100	78.774	Callithrix_jacchus
MGP_SPRETEiJ_G0025285	Esf1	100	78.169	ENSCAFG00000005587	ESF1	100	77.230	Canis_familiaris
MGP_SPRETEiJ_G0025285	Esf1	100	78.169	ENSCAFG00020027530	ESF1	100	77.230	Canis_lupus_dingo
MGP_SPRETEiJ_G0025285	Esf1	100	79.715	ENSCHIG00000021188	ESF1	100	79.715	Capra_hircus
MGP_SPRETEiJ_G0025285	Esf1	98	83.221	ENSTSYG00000009956	ESF1	100	79.339	Carlito_syrichta
MGP_SPRETEiJ_G0025285	Esf1	80	80.797	ENSCAPG00000010333	-	89	94.444	Cavia_aperea
MGP_SPRETEiJ_G0025285	Esf1	100	68.452	ENSCAPG00000010466	-	100	68.371	Cavia_aperea
MGP_SPRETEiJ_G0025285	Esf1	100	79.762	ENSCPOG00000014027	-	100	79.167	Cavia_porcellus
MGP_SPRETEiJ_G0025285	Esf1	100	79.270	ENSCCAG00000024521	ESF1	100	79.270	Cebus_capucinus
MGP_SPRETEiJ_G0025285	Esf1	98	83.221	ENSCATG00000042792	ESF1	100	80.422	Cercocebus_atys
MGP_SPRETEiJ_G0025285	Esf1	98	84.564	ENSCLAG00000013266	-	100	80.618	Chinchilla_lanigera
MGP_SPRETEiJ_G0025285	Esf1	100	79.671	ENSCSAG00000011777	ESF1	100	79.553	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025285	Esf1	67	50.000	ENSCSAVG00000009015	-	87	49.206	Ciona_savignyi
MGP_SPRETEiJ_G0025285	Esf1	100	80.000	ENSCANG00000030674	ESF1	100	79.649	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025285	Esf1	98	93.289	ENSCGRG00001018257	Esf1	100	86.190	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025285	Esf1	74	64.615	ENSCSEG00000001159	esf1	85	65.079	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0025285	Esf1	73	75.758	ENSCVAG00000007894	esf1	91	69.444	Cyprinodon_variegatus
MGP_SPRETEiJ_G0025285	Esf1	75	68.919	ENSDARG00000008740	esf1	86	69.444	Danio_rerio
MGP_SPRETEiJ_G0025285	Esf1	98	81.879	ENSDNOG00000019409	ESF1	100	77.686	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025285	Esf1	100	81.807	ENSDORG00000016313	Esf1	100	81.429	Dipodomys_ordii
MGP_SPRETEiJ_G0025285	Esf1	70	49.412	FBgn0024364	CG11417	80	54.286	Drosophila_melanogaster
MGP_SPRETEiJ_G0025285	Esf1	81	78.667	ENSETEG00000004471	ESF1	78	79.531	Echinops_telfairi
MGP_SPRETEiJ_G0025285	Esf1	98	47.403	ENSEBUG00000015161	esf1	87	50.000	Eptatretus_burgeri
MGP_SPRETEiJ_G0025285	Esf1	100	80.353	ENSEASG00005001777	ESF1	100	78.706	Equus_asinus_asinus
MGP_SPRETEiJ_G0025285	Esf1	100	80.235	ENSECAG00000019188	ESF1	100	78.824	Equus_caballus
MGP_SPRETEiJ_G0025285	Esf1	58	83.562	ENSEEUG00000015837	-	100	56.182	Erinaceus_europaeus
MGP_SPRETEiJ_G0025285	Esf1	75	69.231	ENSELUG00000000408	esf1	82	69.444	Esox_lucius
MGP_SPRETEiJ_G0025285	Esf1	98	82.550	ENSFCAG00000000919	ESF1	100	77.442	Felis_catus
MGP_SPRETEiJ_G0025285	Esf1	99	61.854	ENSFALG00000010914	ESF1	91	72.297	Ficedula_albicollis
MGP_SPRETEiJ_G0025285	Esf1	98	81.879	ENSFDAG00000014777	ESF1	100	78.333	Fukomys_damarensis
MGP_SPRETEiJ_G0025285	Esf1	59	60.396	ENSFHEG00000014984	esf1	99	60.990	Fundulus_heteroclitus
MGP_SPRETEiJ_G0025285	Esf1	100	60.685	ENSGALG00000034768	ESF1	92	71.918	Gallus_gallus
MGP_SPRETEiJ_G0025285	Esf1	75	68.919	ENSGAFG00000000540	esf1	90	69.444	Gambusia_affinis
MGP_SPRETEiJ_G0025285	Esf1	100	79.371	ENSGGOG00000006692	ESF1	100	78.671	Gorilla_gorilla
MGP_SPRETEiJ_G0025285	Esf1	80	72.727	ENSHBUG00000001890	esf1	87	72.222	Haplochromis_burtoni
MGP_SPRETEiJ_G0025285	Esf1	100	80.143	ENSHGLG00000011505	ESF1	100	79.310	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025285	Esf1	100	80.143	ENSHGLG00100015045	ESF1	100	79.310	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025285	Esf1	75	69.231	ENSIPUG00000006507	esf1	85	69.444	Ictalurus_punctatus
MGP_SPRETEiJ_G0025285	Esf1	100	81.213	ENSSTOG00000009846	ESF1	100	80.024	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025285	Esf1	100	79.623	ENSJJAG00000012570	Esf1	100	79.741	Jaculus_jaculus
MGP_SPRETEiJ_G0025285	Esf1	58	82.353	ENSLACG00000016439	ESF1	66	67.725	Latimeria_chalumnae
MGP_SPRETEiJ_G0025285	Esf1	75	67.949	ENSLOCG00000015979	esf1	72	69.444	Lepisosteus_oculatus
MGP_SPRETEiJ_G0025285	Esf1	100	78.081	ENSLAFG00000005479	ESF1	100	77.370	Loxodonta_africana
MGP_SPRETEiJ_G0025285	Esf1	100	80.305	ENSMFAG00000036841	ESF1	100	80.188	Macaca_fascicularis
MGP_SPRETEiJ_G0025285	Esf1	100	80.188	ENSMNEG00000044042	ESF1	100	80.070	Macaca_nemestrina
MGP_SPRETEiJ_G0025285	Esf1	100	80.188	ENSMLEG00000037121	ESF1	100	80.070	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025285	Esf1	76	74.324	ENSMAMG00000018648	esf1	88	75.000	Mastacembelus_armatus
MGP_SPRETEiJ_G0025285	Esf1	59	60.714	ENSMZEG00005013912	esf1	99	60.119	Maylandia_zebra
MGP_SPRETEiJ_G0025285	Esf1	100	61.430	ENSMGAG00000004291	ESF1	82	69.863	Meleagris_gallopavo
MGP_SPRETEiJ_G0025285	Esf1	98	93.960	ENSMAUG00000015975	Esf1	100	86.905	Mesocricetus_auratus
MGP_SPRETEiJ_G0025285	Esf1	98	85.235	ENSMICG00000010711	ESF1	100	81.434	Microcebus_murinus
MGP_SPRETEiJ_G0025285	Esf1	100	85.714	ENSMOCG00000005902	Esf1	92	93.836	Microtus_ochrogaster
MGP_SPRETEiJ_G0025285	Esf1	59	59.195	ENSMMOG00000018693	esf1	99	59.316	Mola_mola
MGP_SPRETEiJ_G0025285	Esf1	100	67.090	ENSMODG00000005066	ESF1	92	75.342	Monodelphis_domestica
MGP_SPRETEiJ_G0025285	Esf1	69	70.270	ENSMALG00000007338	esf1	86	70.833	Monopterus_albus
MGP_SPRETEiJ_G0025285	Esf1	100	97.743	MGP_CAROLIEiJ_G0024365	Esf1	100	97.743	Mus_caroli
MGP_SPRETEiJ_G0025285	Esf1	100	98.658	ENSMUSG00000045624	Esf1	100	98.343	Mus_musculus
MGP_SPRETEiJ_G0025285	Esf1	98	98.658	MGP_PahariEiJ_G0025810	Esf1	100	94.668	Mus_pahari
MGP_SPRETEiJ_G0025285	Esf1	100	79.274	ENSMPUG00000001450	ESF1	100	79.132	Mustela_putorius_furo
MGP_SPRETEiJ_G0025285	Esf1	98	83.221	ENSMLUG00000013080	ESF1	100	78.378	Myotis_lucifugus
MGP_SPRETEiJ_G0025285	Esf1	100	77.389	ENSNLEG00000014563	ESF1	100	76.690	Nomascus_leucogenys
MGP_SPRETEiJ_G0025285	Esf1	60	80.830	ENSOPRG00000004862	ESF1	100	80.830	Ochotona_princeps
MGP_SPRETEiJ_G0025285	Esf1	98	83.221	ENSODEG00000006824	ESF1	100	78.954	Octodon_degus
MGP_SPRETEiJ_G0025285	Esf1	79	72.727	ENSONIG00000006804	esf1	95	72.222	Oreochromis_niloticus
MGP_SPRETEiJ_G0025285	Esf1	100	75.168	ENSOANG00000008432	-	92	75.342	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0025285	Esf1	95	92.896	ENSOCUG00000005414	ESF1	100	77.412	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025285	Esf1	59	55.513	ENSORLG00000018625	esf1	99	54.183	Oryzias_latipes
MGP_SPRETEiJ_G0025285	Esf1	66	55.631	ENSORLG00015022826	esf1	89	53.005	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0025285	Esf1	59	54.080	ENSOMEG00000009311	esf1	99	54.962	Oryzias_melastigma
MGP_SPRETEiJ_G0025285	Esf1	98	83.444	ENSOGAG00000016912	ESF1	100	76.750	Otolemur_garnettii
MGP_SPRETEiJ_G0025285	Esf1	100	76.617	ENSOARG00000011158	ESF1	100	76.504	Ovis_aries
MGP_SPRETEiJ_G0025285	Esf1	100	79.695	ENSPPAG00000024379	ESF1	100	78.756	Pan_paniscus
MGP_SPRETEiJ_G0025285	Esf1	98	82.550	ENSPPRG00000012007	ESF1	100	77.713	Panthera_pardus
MGP_SPRETEiJ_G0025285	Esf1	98	82.550	ENSPTIG00000020063	ESF1	100	77.687	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025285	Esf1	100	79.511	ENSPTRG00000013258	ESF1	100	78.463	Pan_troglodytes
MGP_SPRETEiJ_G0025285	Esf1	76	68.605	ENSPKIG00000024448	esf1	83	72.222	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025285	Esf1	80	64.935	ENSPMGG00000016911	esf1	81	65.278	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025285	Esf1	98	75.168	ENSPCIG00000019331	ESF1	100	67.681	Phascolarctos_cinereus
MGP_SPRETEiJ_G0025285	Esf1	77	64.865	ENSPFOG00000010101	esf1	71	66.667	Poecilia_formosa
MGP_SPRETEiJ_G0025285	Esf1	59	56.867	ENSPLAG00000006452	esf1	99	56.673	Poecilia_latipinna
MGP_SPRETEiJ_G0025285	Esf1	75	66.216	ENSPMEG00000000713	esf1	88	66.667	Poecilia_mexicana
MGP_SPRETEiJ_G0025285	Esf1	75	67.568	ENSPREG00000004431	esf1	86	68.056	Poecilia_reticulata
MGP_SPRETEiJ_G0025285	Esf1	100	80.000	ENSPPYG00000010715	ESF1	100	78.713	Pongo_abelii
MGP_SPRETEiJ_G0025285	Esf1	98	78.000	ENSPCAG00000006881	ESF1	100	71.226	Procavia_capensis
MGP_SPRETEiJ_G0025285	Esf1	83	90.278	ENSPVAG00000001295	ESF1	83	90.278	Pteropus_vampyrus
MGP_SPRETEiJ_G0025285	Esf1	81	70.130	ENSPNYG00000015735	esf1	88	70.833	Pundamilia_nyererei
MGP_SPRETEiJ_G0025285	Esf1	75	66.216	ENSPNAG00000014721	esf1	75	61.368	Pygocentrus_nattereri
MGP_SPRETEiJ_G0025285	Esf1	98	97.987	ENSRNOG00000004777	Esf1	92	97.945	Rattus_norvegicus
MGP_SPRETEiJ_G0025285	Esf1	100	79.695	ENSRBIG00000035763	ESF1	100	79.577	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025285	Esf1	100	79.859	ENSRROG00000032022	ESF1	100	79.742	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025285	Esf1	55	33.200	YDR365C	-	73	33.333	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0025285	Esf1	100	78.546	ENSSBOG00000030387	ESF1	100	78.261	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025285	Esf1	99	77.181	ENSSHAG00000000449	ESF1	84	79.167	Sarcophilus_harrisii
MGP_SPRETEiJ_G0025285	Esf1	68	71.622	ENSSDUG00000019460	esf1	91	72.222	Seriola_dumerili
MGP_SPRETEiJ_G0025285	Esf1	98	72.848	ENSSPUG00000012635	ESF1	70	75.000	Sphenodon_punctatus
MGP_SPRETEiJ_G0025285	Esf1	76	74.026	ENSSPAG00000019077	esf1	87	73.611	Stegastes_partitus
MGP_SPRETEiJ_G0025285	Esf1	98	83.221	ENSSSCG00000007077	ESF1	100	78.074	Sus_scrofa
MGP_SPRETEiJ_G0025285	Esf1	100	59.429	ENSTGUG00000002450	ESF1	65	73.611	Taeniopygia_guttata
MGP_SPRETEiJ_G0025285	Esf1	81	58.491	ENSTRUG00000009445	esf1	86	73.016	Takifugu_rubripes
MGP_SPRETEiJ_G0025285	Esf1	72	86.131	ENSTBEG00000008552	ESF1	76	86.131	Tupaia_belangeri
MGP_SPRETEiJ_G0025285	Esf1	100	76.923	ENSTTRG00000005335	ESF1	100	77.453	Tursiops_truncatus
MGP_SPRETEiJ_G0025285	Esf1	98	81.208	ENSUMAG00000008579	ESF1	100	78.546	Ursus_maritimus
MGP_SPRETEiJ_G0025285	Esf1	92	82.716	ENSVPAG00000005291	ESF1	84	96.000	Vicugna_pacos
MGP_SPRETEiJ_G0025285	Esf1	100	77.347	ENSVVUG00000014318	ESF1	93	77.230	Vulpes_vulpes
MGP_SPRETEiJ_G0025285	Esf1	69	75.676	ENSXETG00000008079	esf1	69	75.000	Xenopus_tropicalis
MGP_SPRETEiJ_G0025285	Esf1	79	57.726	ENSXMAG00000017651	esf1	87	70.833	Xiphophorus_maculatus