EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025318 (Gene tree)
Gene ID: -
Gene Symbol: Xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 67852 bases
Position: chr2:148305881-148373732
Accession: 894687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0057189	XRN_N	PF03159.18	1.6e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0057193	-	335	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0057192	-	575	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0057191	-	623	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0057190	-	987	-	MGP_SPRETEiJ_P0057190	272 (aa)	-	-
MGP_SPRETEiJ_T0057189	-	3424	-	MGP_SPRETEiJ_P0057189	951 (aa)	-	UPI00000283FC

Gene Model

Click here to download MGP_SPRETEiJ_G0025318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025318's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0025318	Xrn2	84	40.625	MGP_SPRETEiJ_G0033678	Xrn1	90	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025318	Xrn2	100	96.004	ENSG00000088930	XRN2	100	96.004	Homo_sapiens
MGP_SPRETEiJ_G0025318	Xrn2	97	72.115	ENSAPOG00000009818	xrn2	100	70.846	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025318	Xrn2	100	95.689	ENSAMEG00000012581	XRN2	100	95.689	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025318	Xrn2	94	82.727	ENSACIG00000015047	xrn2	95	75.048	Amphilophus_citrinellus
MGP_SPRETEiJ_G0025318	Xrn2	97	72.650	ENSAOCG00000023632	xrn2	100	71.458	Amphiprion_ocellaris
MGP_SPRETEiJ_G0025318	Xrn2	97	72.572	ENSAPEG00000014871	xrn2	100	71.283	Amphiprion_percula
MGP_SPRETEiJ_G0025318	Xrn2	95	72.048	ENSATEG00000001273	xrn2	98	71.398	Anabas_testudineus
MGP_SPRETEiJ_G0025318	Xrn2	97	82.974	ENSAPLG00000013869	XRN2	99	83.405	Anas_platyrhynchos
MGP_SPRETEiJ_G0025318	Xrn2	94	90.984	ENSACAG00000005565	XRN2	100	80.042	Anolis_carolinensis
MGP_SPRETEiJ_G0025318	Xrn2	100	95.373	ENSANAG00000020126	XRN2	100	95.373	Aotus_nancymaae
MGP_SPRETEiJ_G0025318	Xrn2	94	88.119	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025318	Xrn2	100	71.779	ENSAMXG00000018301	xrn2	100	71.779	Astyanax_mexicanus
MGP_SPRETEiJ_G0025318	Xrn2	100	93.487	ENSBTAG00000011304	XRN2	100	93.487	Bos_taurus
MGP_SPRETEiJ_G0025318	Xrn2	83	65.546	WBGene00006964	xrn-2	89	54.535	Caenorhabditis_elegans
MGP_SPRETEiJ_G0025318	Xrn2	100	95.478	ENSCJAG00000005611	XRN2	100	95.478	Callithrix_jacchus
MGP_SPRETEiJ_G0025318	Xrn2	100	95.689	ENSCAFG00000005185	XRN2	100	95.689	Canis_familiaris
MGP_SPRETEiJ_G0025318	Xrn2	100	95.689	ENSCAFG00020027479	XRN2	100	95.689	Canis_lupus_dingo
MGP_SPRETEiJ_G0025318	Xrn2	100	93.592	ENSCHIG00000006921	XRN2	100	93.592	Capra_hircus
MGP_SPRETEiJ_G0025318	Xrn2	100	94.953	ENSTSYG00000008315	XRN2	100	94.953	Carlito_syrichta
MGP_SPRETEiJ_G0025318	Xrn2	85	95.902	ENSCAPG00000010773	XRN2	99	80.927	Cavia_aperea
MGP_SPRETEiJ_G0025318	Xrn2	100	96.004	ENSCPOG00000009407	XRN2	100	96.004	Cavia_porcellus
MGP_SPRETEiJ_G0025318	Xrn2	100	96.109	ENSCATG00000040350	XRN2	100	96.109	Cercocebus_atys
MGP_SPRETEiJ_G0025318	Xrn2	100	96.109	ENSCLAG00000013419	XRN2	100	96.109	Chinchilla_lanigera
MGP_SPRETEiJ_G0025318	Xrn2	100	96.109	ENSCSAG00000011094	XRN2	100	96.109	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025318	Xrn2	76	100.000	ENSCHOG00000013404	XRN2	70	99.462	Choloepus_hoffmanni
MGP_SPRETEiJ_G0025318	Xrn2	94	91.071	ENSCPBG00000023533	XRN2	100	84.479	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025318	Xrn2	74	72.269	ENSCING00000022336	-	100	60.024	Ciona_intestinalis
MGP_SPRETEiJ_G0025318	Xrn2	94	65.517	ENSCSAVG00000011217	-	96	69.880	Ciona_savignyi
MGP_SPRETEiJ_G0025318	Xrn2	100	96.109	ENSCANG00000040240	XRN2	100	96.109	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025318	Xrn2	98	97.097	ENSCGRG00001010676	Xrn2	99	97.097	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025318	Xrn2	97	96.336	ENSCGRG00000006378	Xrn2	99	96.336	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025318	Xrn2	54	72.745	ENSCSEG00000005628	xrn2	100	72.745	Cynoglossus_semilaevis
MGP_SPRETEiJ_G0025318	Xrn2	94	77.391	ENSCVAG00000018999	xrn2	98	77.333	Cyprinodon_variegatus
MGP_SPRETEiJ_G0025318	Xrn2	94	85.149	ENSDARG00000101900	xrn2	96	78.394	Danio_rerio
MGP_SPRETEiJ_G0025318	Xrn2	100	95.058	ENSDNOG00000001895	XRN2	100	95.058	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025318	Xrn2	100	93.481	ENSDORG00000005434	Xrn2	100	93.481	Dipodomys_ordii
MGP_SPRETEiJ_G0025318	Xrn2	93	69.919	FBgn0031868	Rat1	87	56.364	Drosophila_melanogaster
MGP_SPRETEiJ_G0025318	Xrn2	94	92.562	ENSETEG00000001740	XRN2	100	82.229	Echinops_telfairi
MGP_SPRETEiJ_G0025318	Xrn2	94	79.832	ENSEBUG00000016136	xrn2	100	71.739	Eptatretus_burgeri
MGP_SPRETEiJ_G0025318	Xrn2	100	95.268	ENSEASG00005002484	XRN2	100	95.268	Equus_asinus_asinus
MGP_SPRETEiJ_G0025318	Xrn2	99	95.359	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
MGP_SPRETEiJ_G0025318	Xrn2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
MGP_SPRETEiJ_G0025318	Xrn2	94	75.652	ENSELUG00000000552	xrn2	100	70.389	Esox_lucius
MGP_SPRETEiJ_G0025318	Xrn2	100	95.478	ENSFCAG00000007970	XRN2	100	95.478	Felis_catus
MGP_SPRETEiJ_G0025318	Xrn2	100	82.267	ENSFALG00000004508	XRN2	100	82.686	Ficedula_albicollis
MGP_SPRETEiJ_G0025318	Xrn2	100	95.689	ENSFDAG00000016311	XRN2	100	95.689	Fukomys_damarensis
MGP_SPRETEiJ_G0025318	Xrn2	54	69.962	ENSFHEG00000013039	xrn2	98	69.962	Fundulus_heteroclitus
MGP_SPRETEiJ_G0025318	Xrn2	94	80.645	ENSGMOG00000013436	xrn2	100	73.390	Gadus_morhua
MGP_SPRETEiJ_G0025318	Xrn2	94	89.744	ENSGALG00000008372	XRN2	100	82.704	Gallus_gallus
MGP_SPRETEiJ_G0025318	Xrn2	94	84.034	ENSGAFG00000014284	xrn2	98	74.302	Gambusia_affinis
MGP_SPRETEiJ_G0025318	Xrn2	94	79.787	ENSGACG00000011870	xrn2	96	78.571	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0025318	Xrn2	94	90.179	ENSGAGG00000004884	XRN2	100	84.271	Gopherus_agassizii
MGP_SPRETEiJ_G0025318	Xrn2	100	96.215	ENSGGOG00000013738	XRN2	100	96.215	Gorilla_gorilla
MGP_SPRETEiJ_G0025318	Xrn2	54	74.664	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
MGP_SPRETEiJ_G0025318	Xrn2	100	94.637	ENSHGLG00000014831	XRN2	100	94.427	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025318	Xrn2	100	94.637	ENSHGLG00100013130	XRN2	100	94.427	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025318	Xrn2	94	82.353	ENSHCOG00000011994	xrn2	99	69.270	Hippocampus_comes
MGP_SPRETEiJ_G0025318	Xrn2	94	83.495	ENSIPUG00000006639	xrn2	100	69.929	Ictalurus_punctatus
MGP_SPRETEiJ_G0025318	Xrn2	100	95.794	ENSSTOG00000000589	XRN2	100	95.794	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025318	Xrn2	100	95.794	ENSJJAG00000022128	Xrn2	100	95.794	Jaculus_jaculus
MGP_SPRETEiJ_G0025318	Xrn2	54	80.273	ENSLBEG00000010041	xrn2	100	80.273	Labrus_bergylta
MGP_SPRETEiJ_G0025318	Xrn2	88	84.426	ENSLACG00000008307	XRN2	99	79.141	Latimeria_chalumnae
MGP_SPRETEiJ_G0025318	Xrn2	99	72.490	ENSLOCG00000016874	xrn2	100	72.490	Lepisosteus_oculatus
MGP_SPRETEiJ_G0025318	Xrn2	100	94.427	ENSLAFG00000014624	XRN2	100	94.427	Loxodonta_africana
MGP_SPRETEiJ_G0025318	Xrn2	100	96.109	ENSMFAG00000038122	XRN2	100	96.109	Macaca_fascicularis
MGP_SPRETEiJ_G0025318	Xrn2	100	96.109	ENSMMUG00000011405	XRN2	100	96.109	Macaca_mulatta
MGP_SPRETEiJ_G0025318	Xrn2	100	96.004	ENSMNEG00000040626	XRN2	100	96.004	Macaca_nemestrina
MGP_SPRETEiJ_G0025318	Xrn2	100	96.004	ENSMLEG00000041897	XRN2	100	96.004	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025318	Xrn2	94	85.149	ENSMAMG00000008633	xrn2	97	72.825	Mastacembelus_armatus
MGP_SPRETEiJ_G0025318	Xrn2	94	88.119	ENSMZEG00005022362	xrn2	97	75.982	Maylandia_zebra
MGP_SPRETEiJ_G0025318	Xrn2	94	89.744	ENSMGAG00000003196	XRN2	99	81.335	Meleagris_gallopavo
MGP_SPRETEiJ_G0025318	Xrn2	100	96.951	ENSMAUG00000021842	Xrn2	100	96.951	Mesocricetus_auratus
MGP_SPRETEiJ_G0025318	Xrn2	100	95.058	ENSMICG00000008126	XRN2	100	95.058	Microcebus_murinus
MGP_SPRETEiJ_G0025318	Xrn2	100	96.740	ENSMOCG00000012588	Xrn2	100	96.740	Microtus_ochrogaster
MGP_SPRETEiJ_G0025318	Xrn2	94	70.229	ENSMMOG00000017576	xrn2	96	75.000	Mola_mola
MGP_SPRETEiJ_G0025318	Xrn2	100	89.695	ENSMODG00000006163	XRN2	100	89.695	Monodelphis_domestica
MGP_SPRETEiJ_G0025318	Xrn2	94	85.149	ENSMALG00000011355	xrn2	95	76.482	Monopterus_albus
MGP_SPRETEiJ_G0025318	Xrn2	100	99.685	MGP_CAROLIEiJ_G0024400	Xrn2	100	99.685	Mus_caroli
MGP_SPRETEiJ_G0025318	Xrn2	100	100.000	ENSMUSG00000027433	Xrn2	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0025318	Xrn2	100	99.685	MGP_PahariEiJ_G0025843	Xrn2	100	99.685	Mus_pahari
MGP_SPRETEiJ_G0025318	Xrn2	100	93.905	ENSMPUG00000001198	XRN2	93	93.905	Mustela_putorius_furo
MGP_SPRETEiJ_G0025318	Xrn2	100	95.373	ENSMLUG00000001536	XRN2	100	95.373	Myotis_lucifugus
MGP_SPRETEiJ_G0025318	Xrn2	100	96.845	ENSNGAG00000018138	Xrn2	100	96.845	Nannospalax_galili
MGP_SPRETEiJ_G0025318	Xrn2	94	88.119	ENSNBRG00000008062	xrn2	97	76.185	Neolamprologus_brichardi
MGP_SPRETEiJ_G0025318	Xrn2	100	96.109	ENSNLEG00000009991	XRN2	100	96.109	Nomascus_leucogenys
MGP_SPRETEiJ_G0025318	Xrn2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
MGP_SPRETEiJ_G0025318	Xrn2	79	100.000	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
MGP_SPRETEiJ_G0025318	Xrn2	100	95.584	ENSODEG00000010745	-	100	95.584	Octodon_degus
MGP_SPRETEiJ_G0025318	Xrn2	98	86.530	ENSODEG00000000860	-	99	86.961	Octodon_degus
MGP_SPRETEiJ_G0025318	Xrn2	94	84.545	ENSONIG00000018720	xrn2	100	71.930	Oreochromis_niloticus
MGP_SPRETEiJ_G0025318	Xrn2	100	89.927	ENSOANG00000015673	XRN2	100	89.927	Ornithorhynchus_anatinus
MGP_SPRETEiJ_G0025318	Xrn2	100	96.215	ENSOCUG00000013468	XRN2	100	96.215	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025318	Xrn2	94	83.838	ENSORLG00000017213	xrn2	97	75.289	Oryzias_latipes
MGP_SPRETEiJ_G0025318	Xrn2	94	83.838	ENSORLG00020001824	xrn2	100	70.612	Oryzias_latipes_hni
MGP_SPRETEiJ_G0025318	Xrn2	94	83.838	ENSORLG00015019747	xrn2	100	70.397	Oryzias_latipes_hsok
MGP_SPRETEiJ_G0025318	Xrn2	94	84.848	ENSOMEG00000019820	xrn2	100	69.402	Oryzias_melastigma
MGP_SPRETEiJ_G0025318	Xrn2	100	95.273	ENSOGAG00000001068	XRN2	100	95.273	Otolemur_garnettii
MGP_SPRETEiJ_G0025318	Xrn2	97	93.420	ENSOARG00000004443	XRN2	100	93.420	Ovis_aries
MGP_SPRETEiJ_G0025318	Xrn2	100	96.215	ENSPPAG00000033549	XRN2	100	96.215	Pan_paniscus
MGP_SPRETEiJ_G0025318	Xrn2	100	95.478	ENSPPRG00000008732	XRN2	100	95.478	Panthera_pardus
MGP_SPRETEiJ_G0025318	Xrn2	97	95.356	ENSPTIG00000015683	XRN2	97	95.356	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025318	Xrn2	100	96.215	ENSPTRG00000013308	XRN2	100	96.215	Pan_troglodytes
MGP_SPRETEiJ_G0025318	Xrn2	100	96.109	ENSPANG00000018088	XRN2	100	96.109	Papio_anubis
MGP_SPRETEiJ_G0025318	Xrn2	100	71.136	ENSPKIG00000016889	xrn2	100	71.209	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025318	Xrn2	80	87.109	ENSPSIG00000014666	XRN2	100	87.109	Pelodiscus_sinensis
MGP_SPRETEiJ_G0025318	Xrn2	100	96.635	ENSPEMG00000000111	Xrn2	100	96.635	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025318	Xrn2	94	84.034	ENSPFOG00000004182	xrn2	99	70.497	Poecilia_formosa
MGP_SPRETEiJ_G0025318	Xrn2	94	84.034	ENSPLAG00000007351	xrn2	96	74.709	Poecilia_latipinna
MGP_SPRETEiJ_G0025318	Xrn2	94	68.634	ENSPMEG00000011798	xrn2	99	69.097	Poecilia_mexicana
MGP_SPRETEiJ_G0025318	Xrn2	94	84.034	ENSPREG00000012452	xrn2	99	73.034	Poecilia_reticulata
MGP_SPRETEiJ_G0025318	Xrn2	100	95.689	ENSPPYG00000010755	XRN2	100	95.689	Pongo_abelii
MGP_SPRETEiJ_G0025318	Xrn2	100	89.087	ENSPCAG00000011191	XRN2	100	89.087	Procavia_capensis
MGP_SPRETEiJ_G0025318	Xrn2	100	88.223	ENSPCOG00000016468	XRN2	100	88.223	Propithecus_coquereli
MGP_SPRETEiJ_G0025318	Xrn2	93	90.909	ENSPVAG00000004596	XRN2	93	90.909	Pteropus_vampyrus
MGP_SPRETEiJ_G0025318	Xrn2	94	88.119	ENSPNYG00000001765	xrn2	97	74.018	Pundamilia_nyererei
MGP_SPRETEiJ_G0025318	Xrn2	94	84.874	ENSPNAG00000010956	xrn2	99	71.792	Pygocentrus_nattereri
MGP_SPRETEiJ_G0025318	Xrn2	100	97.687	ENSRNOG00000011785	Xrn2	100	97.687	Rattus_norvegicus
MGP_SPRETEiJ_G0025318	Xrn2	94	94.400	ENSRBIG00000036193	XRN2	100	97.311	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025318	Xrn2	100	96.109	ENSRROG00000044400	XRN2	90	96.109	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025318	Xrn2	75	56.557	YOR048C	RAT1	63	53.846	Saccharomyces_cerevisiae
MGP_SPRETEiJ_G0025318	Xrn2	100	95.584	ENSSBOG00000021014	XRN2	100	95.584	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025318	Xrn2	100	72.033	ENSSFOG00015001091	xrn2	100	72.033	Scleropages_formosus
MGP_SPRETEiJ_G0025318	Xrn2	94	82.178	ENSSMAG00000007834	xrn2	100	68.927	Scophthalmus_maximus
MGP_SPRETEiJ_G0025318	Xrn2	94	83.168	ENSSDUG00000012802	xrn2	99	72.964	Seriola_dumerili
MGP_SPRETEiJ_G0025318	Xrn2	94	85.149	ENSSLDG00000021273	xrn2	100	74.237	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025318	Xrn2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
MGP_SPRETEiJ_G0025318	Xrn2	94	90.164	ENSSPUG00000005485	XRN2	96	79.060	Sphenodon_punctatus
MGP_SPRETEiJ_G0025318	Xrn2	100	70.642	ENSSPAG00000016027	xrn2	99	70.727	Stegastes_partitus
MGP_SPRETEiJ_G0025318	Xrn2	100	93.796	ENSSSCG00000007109	XRN2	100	93.796	Sus_scrofa
MGP_SPRETEiJ_G0025318	Xrn2	100	80.982	ENSTGUG00000007535	XRN2	100	81.400	Taeniopygia_guttata
MGP_SPRETEiJ_G0025318	Xrn2	94	77.391	ENSTRUG00000015489	xrn2	100	69.130	Takifugu_rubripes
MGP_SPRETEiJ_G0025318	Xrn2	94	89.109	ENSTNIG00000010712	xrn2	100	71.904	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0025318	Xrn2	100	94.953	ENSTBEG00000004119	XRN2	100	94.953	Tupaia_belangeri
MGP_SPRETEiJ_G0025318	Xrn2	93	96.937	ENSTTRG00000009087	XRN2	93	96.937	Tursiops_truncatus
MGP_SPRETEiJ_G0025318	Xrn2	100	95.794	ENSUAMG00000024634	XRN2	100	95.794	Ursus_americanus
MGP_SPRETEiJ_G0025318	Xrn2	97	95.464	ENSUMAG00000004012	XRN2	95	95.464	Ursus_maritimus
MGP_SPRETEiJ_G0025318	Xrn2	89	87.825	ENSVPAG00000010694	XRN2	91	87.825	Vicugna_pacos
MGP_SPRETEiJ_G0025318	Xrn2	100	95.584	ENSVVUG00000012178	XRN2	100	95.584	Vulpes_vulpes
MGP_SPRETEiJ_G0025318	Xrn2	94	85.714	ENSXETG00000023501	xrn2	100	74.220	Xenopus_tropicalis
MGP_SPRETEiJ_G0025318	Xrn2	94	84.034	ENSXMAG00000000242	xrn2	92	79.319	Xiphophorus_maculatus