EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025327 (Gene tree)
Gene ID: -
Gene Symbol: Gzf1
Alias: 8430437G08Rik|Zfp336
Full Name: GDNF-inducible zinc finger protein 1
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 15238 bases
Position: chr2:150017290-150032527
Accession: 1921783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0057213	zf-C2H2	PF00096.26	3.2e-34	1	6
MGP_SPRETEiJ_P0057213	zf-C2H2	PF00096.26	3.2e-34	2	6
MGP_SPRETEiJ_P0057213	zf-C2H2	PF00096.26	3.2e-34	3	6
MGP_SPRETEiJ_P0057213	zf-C2H2	PF00096.26	3.2e-34	4	6
MGP_SPRETEiJ_P0057213	zf-C2H2	PF00096.26	3.2e-34	5	6
MGP_SPRETEiJ_P0057213	zf-C2H2	PF00096.26	3.2e-34	6	6
MGP_SPRETEiJ_P0057213	zf-met	PF12874.7	6.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0057213	-	4232	-	MGP_SPRETEiJ_P0057213	706 (aa)	-	-
MGP_SPRETEiJ_T0057214	-	702	-	MGP_SPRETEiJ_P0057214	146 (aa)	-	-
MGP_SPRETEiJ_T0057215	-	734	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0025327	Gzf1	84	34.286	MGP_SPRETEiJ_G0015474	Zbtb41	52	34.304
MGP_SPRETEiJ_G0025327	Gzf1	73	46.193	MGP_SPRETEiJ_G0025835	Mynn	58	46.193
MGP_SPRETEiJ_G0025327	Gzf1	64	37.349	MGP_SPRETEiJ_G0033978	Zfp651	51	37.349
MGP_SPRETEiJ_G0025327	Gzf1	77	44.103	MGP_SPRETEiJ_G0028173	Zbtb49	62	46.479
MGP_SPRETEiJ_G0025327	Gzf1	61	36.400	MGP_SPRETEiJ_G0033309	Zbtb16	61	36.481
MGP_SPRETEiJ_G0025327	Gzf1	83	37.118	MGP_SPRETEiJ_G0027723	Zbtb17	78	39.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025327	Gzf1	100	82.022	ENSG00000125812	GZF1	100	87.500	Homo_sapiens
MGP_SPRETEiJ_G0025327	Gzf1	85	49.835	ENSAPOG00000012930	GZF1	94	49.507	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025327	Gzf1	100	74.860	ENSAMEG00000009853	GZF1	100	74.860	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025327	Gzf1	89	46.584	ENSACIG00000004753	-	76	46.739	Amphilophus_citrinellus
MGP_SPRETEiJ_G0025327	Gzf1	84	49.236	ENSAOCG00000024275	GZF1	93	49.236	Amphiprion_ocellaris
MGP_SPRETEiJ_G0025327	Gzf1	97	42.954	ENSAPEG00000017195	GZF1	85	43.225	Amphiprion_percula
MGP_SPRETEiJ_G0025327	Gzf1	100	39.919	ENSATEG00000018374	GZF1	88	77.596	Anabas_testudineus
MGP_SPRETEiJ_G0025327	Gzf1	100	80.309	ENSANAG00000028240	GZF1	100	80.591	Aotus_nancymaae
MGP_SPRETEiJ_G0025327	Gzf1	87	47.161	ENSAMXG00000017178	GZF1	81	47.326	Astyanax_mexicanus
MGP_SPRETEiJ_G0025327	Gzf1	100	80.028	ENSCJAG00000000733	GZF1	100	80.169	Callithrix_jacchus
MGP_SPRETEiJ_G0025327	Gzf1	100	78.420	ENSCAFG00000005142	GZF1	100	78.420	Canis_familiaris
MGP_SPRETEiJ_G0025327	Gzf1	56	82.273	ENSCAFG00020027463	-	100	82.273	Canis_lupus_dingo
MGP_SPRETEiJ_G0025327	Gzf1	100	76.224	ENSTSYG00000028054	GZF1	100	75.035	Carlito_syrichta
MGP_SPRETEiJ_G0025327	Gzf1	100	74.721	ENSCAPG00000002173	GZF1	100	74.581	Cavia_aperea
MGP_SPRETEiJ_G0025327	Gzf1	100	74.581	ENSCPOG00000010790	GZF1	100	74.441	Cavia_porcellus
MGP_SPRETEiJ_G0025327	Gzf1	100	80.028	ENSCCAG00000035601	GZF1	100	80.169	Cebus_capucinus
MGP_SPRETEiJ_G0025327	Gzf1	100	81.627	ENSCATG00000039279	GZF1	100	81.627	Cercocebus_atys
MGP_SPRETEiJ_G0025327	Gzf1	100	73.907	ENSCLAG00000014714	GZF1	100	73.634	Chinchilla_lanigera
MGP_SPRETEiJ_G0025327	Gzf1	100	81.601	ENSCSAG00000011054	GZF1	100	81.601	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025327	Gzf1	100	72.346	ENSCPBG00000023415	GZF1	100	72.067	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025327	Gzf1	100	81.575	ENSCANG00000041260	GZF1	100	81.575	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025327	Gzf1	100	88.244	ENSCGRG00001003944	Gzf1	100	87.960	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025327	Gzf1	100	88.244	ENSCGRG00000012721	Gzf1	100	87.960	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025327	Gzf1	80	77.178	ENSDNOG00000014290	GZF1	100	77.352	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025327	Gzf1	100	81.767	ENSDORG00000011855	Gzf1	100	81.907	Dipodomys_ordii
MGP_SPRETEiJ_G0025327	Gzf1	64	75.093	ENSEBUG00000004858	GZF1	58	75.093	Eptatretus_burgeri
MGP_SPRETEiJ_G0025327	Gzf1	56	86.818	ENSECAG00000040045	-	100	86.818	Equus_caballus
MGP_SPRETEiJ_G0025327	Gzf1	83	47.455	ENSELUG00000013581	GZF1	86	48.333	Esox_lucius
MGP_SPRETEiJ_G0025327	Gzf1	100	79.021	ENSFCAG00000006484	GZF1	100	79.021	Felis_catus
MGP_SPRETEiJ_G0025327	Gzf1	93	75.735	ENSFDAG00000019468	GZF1	96	75.147	Fukomys_damarensis
MGP_SPRETEiJ_G0025327	Gzf1	89	45.482	ENSFHEG00000020498	GZF1	76	46.262	Fundulus_heteroclitus
MGP_SPRETEiJ_G0025327	Gzf1	87	47.826	ENSGMOG00000011017	GZF1	100	48.148	Gadus_morhua
MGP_SPRETEiJ_G0025327	Gzf1	100	73.184	ENSGALG00000053640	GZF1	100	72.905	Gallus_gallus
MGP_SPRETEiJ_G0025327	Gzf1	89	46.512	ENSGAFG00000008725	GZF1	73	46.154	Gambusia_affinis
MGP_SPRETEiJ_G0025327	Gzf1	87	47.702	ENSGACG00000012415	GZF1	99	70.408	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0025327	Gzf1	100	81.907	ENSGGOG00000023248	GZF1	100	81.882	Gorilla_gorilla
MGP_SPRETEiJ_G0025327	Gzf1	99	42.536	ENSHBUG00000016502	-	88	42.373	Haplochromis_burtoni
MGP_SPRETEiJ_G0025327	Gzf1	100	74.185	ENSHGLG00000008891	GZF1	100	74.216	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025327	Gzf1	100	74.185	ENSHGLG00100015117	GZF1	100	74.216	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025327	Gzf1	99	41.725	ENSHCOG00000004326	GZF1	57	52.970	Hippocampus_comes
MGP_SPRETEiJ_G0025327	Gzf1	100	82.048	ENSSTOG00000009820	GZF1	100	82.048	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025327	Gzf1	100	83.966	ENSJJAG00000008172	Gzf1	100	83.916	Jaculus_jaculus
MGP_SPRETEiJ_G0025327	Gzf1	50	71.579	ENSKMAG00000001453	-	60	71.579	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0025327	Gzf1	86	49.038	ENSLBEG00000025803	-	81	45.634	Labrus_bergylta
MGP_SPRETEiJ_G0025327	Gzf1	100	81.382	ENSLAFG00000002458	GZF1	100	81.382	Loxodonta_africana
MGP_SPRETEiJ_G0025327	Gzf1	100	81.627	ENSMFAG00000042408	GZF1	100	81.627	Macaca_fascicularis
MGP_SPRETEiJ_G0025327	Gzf1	100	81.627	ENSMMUG00000022387	GZF1	100	81.627	Macaca_mulatta
MGP_SPRETEiJ_G0025327	Gzf1	100	81.742	ENSMNEG00000033117	GZF1	100	81.742	Macaca_nemestrina
MGP_SPRETEiJ_G0025327	Gzf1	100	81.742	ENSMLEG00000036831	GZF1	100	81.742	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025327	Gzf1	99	44.648	ENSMAMG00000011931	-	87	44.789	Mastacembelus_armatus
MGP_SPRETEiJ_G0025327	Gzf1	99	41.940	ENSMZEG00005010711	-	88	41.915	Maylandia_zebra
MGP_SPRETEiJ_G0025327	Gzf1	85	90.556	ENSMAUG00000019656	Gzf1	100	90.894	Mesocricetus_auratus
MGP_SPRETEiJ_G0025327	Gzf1	100	81.716	ENSMICG00000046070	GZF1	100	81.997	Microcebus_murinus
MGP_SPRETEiJ_G0025327	Gzf1	100	88.260	ENSMOCG00000017816	Gzf1	100	88.119	Microtus_ochrogaster
MGP_SPRETEiJ_G0025327	Gzf1	87	48.773	ENSMMOG00000004395	-	75	48.450	Mola_mola
MGP_SPRETEiJ_G0025327	Gzf1	100	74.581	ENSMODG00000006238	GZF1	100	80.769	Monodelphis_domestica
MGP_SPRETEiJ_G0025327	Gzf1	100	97.740	MGP_CAROLIEiJ_G0024409	Gzf1	100	97.740	Mus_caroli
MGP_SPRETEiJ_G0025327	Gzf1	100	99.292	ENSMUSG00000027439	Gzf1	100	99.292	Mus_musculus
MGP_SPRETEiJ_G0025327	Gzf1	100	98.020	MGP_PahariEiJ_G0025852	Gzf1	100	98.020	Mus_pahari
MGP_SPRETEiJ_G0025327	Gzf1	100	78.352	ENSMPUG00000001160	GZF1	89	78.042	Mustela_putorius_furo
MGP_SPRETEiJ_G0025327	Gzf1	98	77.286	ENSMLUG00000002194	GZF1	100	77.143	Myotis_lucifugus
MGP_SPRETEiJ_G0025327	Gzf1	100	86.178	ENSNGAG00000024012	Gzf1	100	85.896	Nannospalax_galili
MGP_SPRETEiJ_G0025327	Gzf1	85	42.523	ENSNBRG00000019987	GZF1	98	44.788	Neolamprologus_brichardi
MGP_SPRETEiJ_G0025327	Gzf1	100	81.294	ENSNLEG00000011565	GZF1	100	81.294	Nomascus_leucogenys
MGP_SPRETEiJ_G0025327	Gzf1	100	74.412	ENSOPRG00000004697	GZF1	100	75.586	Ochotona_princeps
MGP_SPRETEiJ_G0025327	Gzf1	100	71.932	ENSODEG00000013020	GZF1	100	72.254	Octodon_degus
MGP_SPRETEiJ_G0025327	Gzf1	87	48.298	ENSONIG00000000989	GZF1	100	48.298	Oreochromis_niloticus
MGP_SPRETEiJ_G0025327	Gzf1	100	78.451	ENSOCUG00000025214	GZF1	100	78.310	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025327	Gzf1	100	80.423	ENSOGAG00000028389	GZF1	100	80.704	Otolemur_garnettii
MGP_SPRETEiJ_G0025327	Gzf1	100	81.857	ENSPPAG00000028487	GZF1	100	81.690	Pan_paniscus
MGP_SPRETEiJ_G0025327	Gzf1	100	79.021	ENSPPRG00000010040	GZF1	100	79.021	Panthera_pardus
MGP_SPRETEiJ_G0025327	Gzf1	100	79.161	ENSPTIG00000019328	GZF1	100	79.161	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025327	Gzf1	100	81.601	ENSPTRG00000013320	GZF1	100	81.575	Pan_troglodytes
MGP_SPRETEiJ_G0025327	Gzf1	100	81.601	ENSPANG00000017419	GZF1	100	81.601	Papio_anubis
MGP_SPRETEiJ_G0025327	Gzf1	89	50.077	ENSPKIG00000003781	GZF1	79	49.385	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025327	Gzf1	100	72.574	ENSPSIG00000014455	GZF1	100	72.626	Pelodiscus_sinensis
MGP_SPRETEiJ_G0025327	Gzf1	61	53.409	ENSPMGG00000003778	-	66	54.733	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025327	Gzf1	100	90.227	ENSPEMG00000011285	Gzf1	100	90.227	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025327	Gzf1	100	75.000	ENSPCIG00000013803	GZF1	100	74.581	Phascolarctos_cinereus
MGP_SPRETEiJ_G0025327	Gzf1	87	48.529	ENSPFOG00000002393	GZF1	100	47.549	Poecilia_formosa
MGP_SPRETEiJ_G0025327	Gzf1	87	46.338	ENSPLAG00000005232	GZF1	93	46.178	Poecilia_latipinna
MGP_SPRETEiJ_G0025327	Gzf1	88	41.206	ENSPMEG00000020017	-	70	41.206	Poecilia_mexicana
MGP_SPRETEiJ_G0025327	Gzf1	89	36.349	ENSPREG00000016398	GZF1	72	42.698	Poecilia_reticulata
MGP_SPRETEiJ_G0025327	Gzf1	100	80.303	ENSPPYG00000010766	GZF1	72	81.637	Pongo_abelii
MGP_SPRETEiJ_G0025327	Gzf1	82	82.161	ENSPCAG00000007544	GZF1	100	81.475	Procavia_capensis
MGP_SPRETEiJ_G0025327	Gzf1	100	82.394	ENSPCOG00000024180	GZF1	100	82.676	Propithecus_coquereli
MGP_SPRETEiJ_G0025327	Gzf1	100	79.831	ENSPVAG00000014056	GZF1	100	79.831	Pteropus_vampyrus
MGP_SPRETEiJ_G0025327	Gzf1	55	45.817	ENSPNYG00000000788	-	63	45.817	Pundamilia_nyererei
MGP_SPRETEiJ_G0025327	Gzf1	100	96.888	ENSRNOG00000004735	Gzf1	100	96.888	Rattus_norvegicus
MGP_SPRETEiJ_G0025327	Gzf1	100	81.678	ENSRBIG00000028715	GZF1	100	81.678	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025327	Gzf1	100	81.907	ENSRROG00000030533	GZF1	100	81.907	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025327	Gzf1	100	79.859	ENSSBOG00000018893	GZF1	100	80.000	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025327	Gzf1	100	74.507	ENSSHAG00000009367	GZF1	100	74.406	Sarcophilus_harrisii
MGP_SPRETEiJ_G0025327	Gzf1	97	46.685	ENSSFOG00015008631	gzf1	81	46.069	Scleropages_formosus
MGP_SPRETEiJ_G0025327	Gzf1	96	45.125	ENSSDUG00000008186	GZF1	81	44.568	Seriola_dumerili
MGP_SPRETEiJ_G0025327	Gzf1	96	45.455	ENSSLDG00000002382	GZF1	81	44.993	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025327	Gzf1	81	85.827	ENSSARG00000010285	GZF1	79	85.827	Sorex_araneus
MGP_SPRETEiJ_G0025327	Gzf1	99	64.363	ENSSPUG00000004147	GZF1	100	67.263	Sphenodon_punctatus
MGP_SPRETEiJ_G0025327	Gzf1	85	46.715	ENSSPAG00000011759	GZF1	75	46.239	Stegastes_partitus
MGP_SPRETEiJ_G0025327	Gzf1	85	74.225	ENSSSCG00000007117	GZF1	100	73.736	Sus_scrofa
MGP_SPRETEiJ_G0025327	Gzf1	87	45.425	ENSTNIG00000010722	GZF1	73	67.559	Tetraodon_nigroviridis
MGP_SPRETEiJ_G0025327	Gzf1	100	75.522	ENSTTRG00000011345	GZF1	100	75.382	Tursiops_truncatus
MGP_SPRETEiJ_G0025327	Gzf1	56	82.727	ENSUAMG00000021858	-	100	82.727	Ursus_americanus
MGP_SPRETEiJ_G0025327	Gzf1	100	78.212	ENSUMAG00000004065	GZF1	100	78.042	Ursus_maritimus
MGP_SPRETEiJ_G0025327	Gzf1	100	78.561	ENSVVUG00000012086	GZF1	100	78.561	Vulpes_vulpes
MGP_SPRETEiJ_G0025327	Gzf1	99	59.007	ENSXETG00000004510	gzf1	99	59.007	Xenopus_tropicalis
MGP_SPRETEiJ_G0025327	Gzf1	88	46.812	ENSXMAG00000023249	GZF1	75	45.904	Xiphophorus_maculatus