EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025375 (Gene tree)
Gene ID: -
Gene Symbol: Zcchc3
Alias: 2810406K24Rik
Full Name: zinc finger%2C CCHC domain containing 3
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 3627 bases
Position: chr2:153804835-153808461
Accession: 1915167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0057374	zf-CCHC	PF00098.23	4.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0057374	-	3060	-	MGP_SPRETEiJ_P0057374	400 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025375's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025375's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025375	Zcchc3	100	84.691	ENSG00000247315	ZCCHC3	100	86.453	Homo_sapiens
MGP_SPRETEiJ_G0025375	Zcchc3	75	84.818	ENSAMEG00000013999	ZCCHC3	97	84.818	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025375	Zcchc3	100	85.608	ENSANAG00000013484	ZCCHC3	100	84.864	Aotus_nancymaae
MGP_SPRETEiJ_G0025375	Zcchc3	64	32.472	ENSACLG00000024271	-	73	31.783	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025375	Zcchc3	60	32.917	ENSACLG00000026211	-	50	32.780	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025375	Zcchc3	59	30.638	ENSAMXG00000035044	-	65	30.638	Astyanax_mexicanus
MGP_SPRETEiJ_G0025375	Zcchc3	52	30.806	ENSAMXG00000033087	-	63	30.806	Astyanax_mexicanus
MGP_SPRETEiJ_G0025375	Zcchc3	60	30.579	ENSAMXG00000029829	-	58	30.579	Astyanax_mexicanus
MGP_SPRETEiJ_G0025375	Zcchc3	70	32.624	ENSAMXG00000037658	-	82	32.624	Astyanax_mexicanus
MGP_SPRETEiJ_G0025375	Zcchc3	100	85.784	ENSBTAG00000002116	ZCCHC3	100	85.784	Bos_taurus
MGP_SPRETEiJ_G0025375	Zcchc3	100	84.119	ENSCJAG00000020839	ZCCHC3	100	85.961	Callithrix_jacchus
MGP_SPRETEiJ_G0025375	Zcchc3	61	96.327	ENSCAFG00000025206	ZCCHC3	99	87.857	Canis_familiaris
MGP_SPRETEiJ_G0025375	Zcchc3	100	84.069	ENSCAFG00020004076	ZCCHC3	100	86.765	Canis_lupus_dingo
MGP_SPRETEiJ_G0025375	Zcchc3	100	83.578	ENSCHIG00000009882	ZCCHC3	100	86.275	Capra_hircus
MGP_SPRETEiJ_G0025375	Zcchc3	100	79.551	ENSCPOG00000023974	ZCCHC3	100	80.549	Cavia_porcellus
MGP_SPRETEiJ_G0025375	Zcchc3	100	82.801	ENSCCAG00000016869	ZCCHC3	100	85.258	Cebus_capucinus
MGP_SPRETEiJ_G0025375	Zcchc3	100	85.891	ENSCATG00000022200	ZCCHC3	100	85.926	Cercocebus_atys
MGP_SPRETEiJ_G0025375	Zcchc3	100	84.653	ENSCLAG00000000269	ZCCHC3	100	85.644	Chinchilla_lanigera
MGP_SPRETEiJ_G0025375	Zcchc3	100	86.139	ENSCSAG00000018761	ZCCHC3	100	86.173	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025375	Zcchc3	66	94.297	ENSCANG00000010812	ZCCHC3	95	94.297	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025375	Zcchc3	100	90.842	ENSCGRG00001009163	-	100	91.089	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025375	Zcchc3	88	82.857	ENSCGRG00001011895	-	95	82.857	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025375	Zcchc3	88	82.857	ENSCGRG00000008273	-	95	82.857	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025375	Zcchc3	100	84.069	ENSDNOG00000047357	ZCCHC3	100	85.049	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025375	Zcchc3	100	83.005	ENSEASG00005003629	ZCCHC3	100	86.207	Equus_asinus_asinus
MGP_SPRETEiJ_G0025375	Zcchc3	100	82.759	ENSECAG00000001035	ZCCHC3	100	85.961	Equus_caballus
MGP_SPRETEiJ_G0025375	Zcchc3	63	35.115	ENSELUG00000017799	-	81	35.115	Esox_lucius
MGP_SPRETEiJ_G0025375	Zcchc3	100	82.968	ENSFCAG00000026760	ZCCHC3	100	85.158	Felis_catus
MGP_SPRETEiJ_G0025375	Zcchc3	82	96.970	ENSGGOG00000044213	ZCCHC3	100	96.970	Gorilla_gorilla
MGP_SPRETEiJ_G0025375	Zcchc3	59	32.377	ENSHBUG00000005879	-	88	32.510	Haplochromis_burtoni
MGP_SPRETEiJ_G0025375	Zcchc3	100	82.921	ENSHGLG00000019351	ZCCHC3	100	83.416	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025375	Zcchc3	65	85.768	ENSHGLG00100009699	ZCCHC3	83	81.250	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025375	Zcchc3	52	37.799	ENSIPUG00000000506	-	54	37.799	Ictalurus_punctatus
MGP_SPRETEiJ_G0025375	Zcchc3	100	82.927	ENSJJAG00000020375	Zcchc3	100	83.415	Jaculus_jaculus
MGP_SPRETEiJ_G0025375	Zcchc3	59	35.593	ENSLACG00000003445	-	58	35.593	Latimeria_chalumnae
MGP_SPRETEiJ_G0025375	Zcchc3	59	38.034	ENSLACG00000002300	-	70	38.034	Latimeria_chalumnae
MGP_SPRETEiJ_G0025375	Zcchc3	57	40.708	ENSLACG00000022202	-	56	40.708	Latimeria_chalumnae
MGP_SPRETEiJ_G0025375	Zcchc3	59	37.607	ENSLACG00000002864	-	78	37.607	Latimeria_chalumnae
MGP_SPRETEiJ_G0025375	Zcchc3	53	36.667	ENSLACG00000000032	-	59	36.667	Latimeria_chalumnae
MGP_SPRETEiJ_G0025375	Zcchc3	53	38.389	ENSLACG00000003328	-	75	38.389	Latimeria_chalumnae
MGP_SPRETEiJ_G0025375	Zcchc3	58	37.826	ENSLACG00000002973	-	60	37.826	Latimeria_chalumnae
MGP_SPRETEiJ_G0025375	Zcchc3	53	38.571	ENSLACG00000022551	-	54	38.571	Latimeria_chalumnae
MGP_SPRETEiJ_G0025375	Zcchc3	55	39.726	ENSLACG00000012216	-	91	33.569	Latimeria_chalumnae
MGP_SPRETEiJ_G0025375	Zcchc3	58	37.931	ENSLACG00000012103	-	68	37.931	Latimeria_chalumnae
MGP_SPRETEiJ_G0025375	Zcchc3	66	30.403	ENSLOCG00000000227	-	85	30.403	Lepisosteus_oculatus
MGP_SPRETEiJ_G0025375	Zcchc3	56	33.186	ENSLOCG00000017623	-	90	33.186	Lepisosteus_oculatus
MGP_SPRETEiJ_G0025375	Zcchc3	67	91.176	ENSLAFG00000030593	ZCCHC3	100	92.647	Loxodonta_africana
MGP_SPRETEiJ_G0025375	Zcchc3	100	86.139	ENSMFAG00000044780	ZCCHC3	100	86.420	Macaca_fascicularis
MGP_SPRETEiJ_G0025375	Zcchc3	100	86.139	ENSMMUG00000038935	ZCCHC3	100	86.420	Macaca_mulatta
MGP_SPRETEiJ_G0025375	Zcchc3	100	86.139	ENSMNEG00000000405	ZCCHC3	100	86.420	Macaca_nemestrina
MGP_SPRETEiJ_G0025375	Zcchc3	50	31.707	ENSMZEG00005025869	-	51	31.163	Maylandia_zebra
MGP_SPRETEiJ_G0025375	Zcchc3	50	31.707	ENSMZEG00005025868	-	51	31.163	Maylandia_zebra
MGP_SPRETEiJ_G0025375	Zcchc3	50	31.707	ENSMZEG00005025871	-	51	31.163	Maylandia_zebra
MGP_SPRETEiJ_G0025375	Zcchc3	57	31.169	ENSMZEG00005000211	-	56	31.169	Maylandia_zebra
MGP_SPRETEiJ_G0025375	Zcchc3	64	32.171	ENSMZEG00005000499	-	73	32.171	Maylandia_zebra
MGP_SPRETEiJ_G0025375	Zcchc3	58	32.906	ENSMZEG00005021211	-	59	32.906	Maylandia_zebra
MGP_SPRETEiJ_G0025375	Zcchc3	54	31.532	ENSMZEG00005008237	-	62	31.532	Maylandia_zebra
MGP_SPRETEiJ_G0025375	Zcchc3	100	85.891	ENSMICG00000031267	ZCCHC3	100	85.891	Microcebus_murinus
MGP_SPRETEiJ_G0025375	Zcchc3	100	92.750	ENSMOCG00000002870	Zcchc3	100	92.750	Microtus_ochrogaster
MGP_SPRETEiJ_G0025375	Zcchc3	59	32.911	ENSMMOG00000004516	-	71	33.333	Mola_mola
MGP_SPRETEiJ_G0025375	Zcchc3	100	98.500	MGP_CAROLIEiJ_G0024454	Zcchc3	100	98.500	Mus_caroli
MGP_SPRETEiJ_G0025375	Zcchc3	100	99.250	ENSMUSG00000074682	Zcchc3	100	99.250	Mus_musculus
MGP_SPRETEiJ_G0025375	Zcchc3	100	98.250	MGP_PahariEiJ_G0025898	Zcchc3	100	98.250	Mus_pahari
MGP_SPRETEiJ_G0025375	Zcchc3	100	85.500	ENSNGAG00000006074	Zcchc3	100	84.750	Nannospalax_galili
MGP_SPRETEiJ_G0025375	Zcchc3	50	33.171	ENSNBRG00000024091	-	56	33.171	Neolamprologus_brichardi
MGP_SPRETEiJ_G0025375	Zcchc3	100	80.693	ENSNLEG00000009533	ZCCHC3	100	82.469	Nomascus_leucogenys
MGP_SPRETEiJ_G0025375	Zcchc3	100	81.553	ENSOPRG00000005081	ZCCHC3	100	80.825	Ochotona_princeps
MGP_SPRETEiJ_G0025375	Zcchc3	100	84.483	ENSODEG00000010730	ZCCHC3	100	83.990	Octodon_degus
MGP_SPRETEiJ_G0025375	Zcchc3	100	80.446	ENSOCUG00000017024	ZCCHC3	100	80.446	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025375	Zcchc3	100	82.885	ENSOGAG00000025208	ZCCHC3	100	83.374	Otolemur_garnettii
MGP_SPRETEiJ_G0025375	Zcchc3	65	93.585	ENSOARG00000019161	ZCCHC3	100	89.726	Ovis_aries
MGP_SPRETEiJ_G0025375	Zcchc3	65	94.340	ENSPPAG00000010453	-	100	94.340	Pan_paniscus
MGP_SPRETEiJ_G0025375	Zcchc3	100	82.108	ENSPPRG00000014724	ZCCHC3	100	86.029	Panthera_pardus
MGP_SPRETEiJ_G0025375	Zcchc3	61	88.980	ENSPTIG00000009393	ZCCHC3	100	88.980	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025375	Zcchc3	100	83.824	ENSPTRG00000047645	ZCCHC3	100	85.575	Pan_troglodytes
MGP_SPRETEiJ_G0025375	Zcchc3	100	86.139	ENSPANG00000013450	ZCCHC3	100	86.173	Papio_anubis
MGP_SPRETEiJ_G0025375	Zcchc3	100	84.444	ENSPEMG00000009059	Zcchc3	100	85.679	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025375	Zcchc3	90	82.065	ENSPCAG00000008034	ZCCHC3	100	82.385	Procavia_capensis
MGP_SPRETEiJ_G0025375	Zcchc3	100	85.396	ENSPCOG00000012289	ZCCHC3	100	85.396	Propithecus_coquereli
MGP_SPRETEiJ_G0025375	Zcchc3	100	85.012	ENSPVAG00000000182	ZCCHC3	100	85.012	Pteropus_vampyrus
MGP_SPRETEiJ_G0025375	Zcchc3	100	94.750	ENSRNOG00000007520	Zcchc3	100	94.750	Rattus_norvegicus
MGP_SPRETEiJ_G0025375	Zcchc3	100	86.386	ENSRBIG00000029757	ZCCHC3	100	86.173	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025375	Zcchc3	100	86.386	ENSRROG00000005210	ZCCHC3	100	86.173	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025375	Zcchc3	100	85.961	ENSSSCG00000007211	ZCCHC3	100	84.069	Sus_scrofa
MGP_SPRETEiJ_G0025375	Zcchc3	100	84.804	ENSTTRG00000008511	ZCCHC3	100	86.029	Tursiops_truncatus
MGP_SPRETEiJ_G0025375	Zcchc3	99	79.657	ENSUAMG00000023407	ZCCHC3	99	79.657	Ursus_americanus
MGP_SPRETEiJ_G0025375	Zcchc3	62	93.089	ENSVPAG00000011267	-	100	93.089	Vicugna_pacos
MGP_SPRETEiJ_G0025375	Zcchc3	76	35.082	ENSXETG00000033341	-	94	44.295	Xenopus_tropicalis
MGP_SPRETEiJ_G0025375	Zcchc3	75	34.551	ENSXETG00000005590	-	100	34.884	Xenopus_tropicalis
MGP_SPRETEiJ_G0025375	Zcchc3	54	35.321	ENSXCOG00000010666	-	57	35.321	Xiphophorus_couchianus