EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025441 (Gene tree)
Gene ID: -
Gene Symbol: Raly
Alias: Merc
Full Name: hnRNP-associated with lethal yellow
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Plus strand
Length: 76499 bases
Position: chr2:156500808-156577306
Accession: 97850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0057582	RRM_1	PF00076.22	1.9e-12	1	1
MGP_SPRETEiJ_P0057580	RRM_1	PF00076.22	3.8e-12	1	1
MGP_SPRETEiJ_P0057579	RRM_1	PF00076.22	7.3e-12	1	1
MGP_SPRETEiJ_P0057584	RRM_1	PF00076.22	7.3e-12	1	1
MGP_SPRETEiJ_P0057585	RRM_1	PF00076.22	7.7e-12	1	1
MGP_SPRETEiJ_P0057581	RRM_1	PF00076.22	8.2e-12	1	1
MGP_SPRETEiJ_P0057583	RRM_1	PF00076.22	8.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0057589	-	337	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0057584	-	1750	-	MGP_SPRETEiJ_P0057584	297 (aa)	-	-
MGP_SPRETEiJ_T0057580	-	851	-	MGP_SPRETEiJ_P0057580	211 (aa)	-	UPI0000D77989
MGP_SPRETEiJ_T0057581	-	1762	-	MGP_SPRETEiJ_P0057581	313 (aa)	-	-
MGP_SPRETEiJ_T0057582	-	546	-	MGP_SPRETEiJ_P0057582	141 (aa)	-	UPI0000D7798A
MGP_SPRETEiJ_T0057583	-	1805	-	MGP_SPRETEiJ_P0057583	313 (aa)	-	-
MGP_SPRETEiJ_T0057579	-	1712	-	MGP_SPRETEiJ_P0057579	297 (aa)	-	-
MGP_SPRETEiJ_T0057585	-	1103	-	MGP_SPRETEiJ_P0057585	299 (aa)	-	-
MGP_SPRETEiJ_T0057586	-	1584	-	-	- (aa)	-	-
MGP_SPRETEiJ_T0057587	-	410	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0025441	Raly	51	32.500	MGP_SPRETEiJ_G0034253	Rbmx	77	32.500
MGP_SPRETEiJ_G0025441	Raly	72	74.757	MGP_SPRETEiJ_G0020126	Hnrnpc	72	53.097
MGP_SPRETEiJ_G0025441	Raly	54	35.526	MGP_SPRETEiJ_G0025528	Srsf6	56	35.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025441	Raly	100	95.745	ENSG00000125970	RALY	100	95.506	Homo_sapiens
MGP_SPRETEiJ_G0025441	Raly	99	74.839	ENSAPOG00000001026	raly	72	75.472	Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025441	Raly	100	89.172	ENSAMEG00000009050	RALY	100	84.049	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025441	Raly	100	77.707	ENSACIG00000024288	raly	87	75.771	Amphilophus_citrinellus
MGP_SPRETEiJ_G0025441	Raly	99	75.484	ENSAOCG00000009883	raly	65	75.472	Amphiprion_ocellaris
MGP_SPRETEiJ_G0025441	Raly	99	76.129	ENSAPEG00000024106	raly	65	75.943	Amphiprion_percula
MGP_SPRETEiJ_G0025441	Raly	100	78.344	ENSATEG00000004870	raly	72	74.661	Anabas_testudineus
MGP_SPRETEiJ_G0025441	Raly	99	78.319	ENSAPLG00000012983	RALY	94	69.667	Anas_platyrhynchos
MGP_SPRETEiJ_G0025441	Raly	100	80.255	ENSACAG00000008983	RALY	88	67.302	Anolis_carolinensis
MGP_SPRETEiJ_G0025441	Raly	100	96.454	ENSANAG00000019376	RALY	100	86.532	Aotus_nancymaae
MGP_SPRETEiJ_G0025441	Raly	100	85.816	ENSACLG00000007561	raly	67	76.037	Astatotilapia_calliptera
MGP_SPRETEiJ_G0025441	Raly	100	98.582	ENSBTAG00000016524	RALY	100	87.879	Bos_taurus
MGP_SPRETEiJ_G0025441	Raly	100	95.035	ENSCJAG00000009449	-	100	86.532	Callithrix_jacchus
MGP_SPRETEiJ_G0025441	Raly	100	96.454	ENSCJAG00000018361	-	100	87.542	Callithrix_jacchus
MGP_SPRETEiJ_G0025441	Raly	100	91.189	ENSCAFG00000007490	RALY	100	87.220	Canis_familiaris
MGP_SPRETEiJ_G0025441	Raly	100	91.630	ENSCAFG00020005069	RALY	100	87.540	Canis_lupus_dingo
MGP_SPRETEiJ_G0025441	Raly	100	90.749	ENSCHIG00000026609	RALY	100	86.581	Capra_hircus
MGP_SPRETEiJ_G0025441	Raly	100	95.745	ENSTSYG00000002598	RALY	99	82.492	Carlito_syrichta
MGP_SPRETEiJ_G0025441	Raly	100	90.995	ENSCAPG00000008110	RALY	100	90.995	Cavia_aperea
MGP_SPRETEiJ_G0025441	Raly	100	98.582	ENSCPOG00000000309	RALY	100	97.630	Cavia_porcellus
MGP_SPRETEiJ_G0025441	Raly	100	96.454	ENSCCAG00000024548	RALY	100	87.879	Cebus_capucinus
MGP_SPRETEiJ_G0025441	Raly	100	95.745	ENSCATG00000031769	RALY	100	87.542	Cercocebus_atys
MGP_SPRETEiJ_G0025441	Raly	100	98.582	ENSCLAG00000016899	RALY	100	90.909	Chinchilla_lanigera
MGP_SPRETEiJ_G0025441	Raly	99	87.500	ENSCSAG00000012199	RALY	100	86.349	Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025441	Raly	96	83.562	ENSCHOG00000000266	RALY	96	87.500	Choloepus_hoffmanni
MGP_SPRETEiJ_G0025441	Raly	100	79.618	ENSCPBG00000019164	RALY	100	68.667	Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025441	Raly	100	95.745	ENSCANG00000037952	RALY	100	88.215	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025441	Raly	100	100.000	ENSCGRG00001014652	Raly	100	91.060	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025441	Raly	100	100.000	ENSCGRG00000011726	Raly	100	91.060	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025441	Raly	57	90.000	ENSCVAG00000003556	raly	70	90.000	Cyprinodon_variegatus
MGP_SPRETEiJ_G0025441	Raly	92	90.000	ENSDARG00000059972	raly	81	79.048	Danio_rerio
MGP_SPRETEiJ_G0025441	Raly	100	96.454	ENSDNOG00000046782	-	100	86.532	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025441	Raly	100	90.749	ENSDNOG00000003227	-	99	85.953	Dasypus_novemcinctus
MGP_SPRETEiJ_G0025441	Raly	100	99.291	ENSDORG00000013400	Raly	100	96.682	Dipodomys_ordii
MGP_SPRETEiJ_G0025441	Raly	100	73.885	ENSETEG00000001919	-	63	76.562	Echinops_telfairi
MGP_SPRETEiJ_G0025441	Raly	96	77.169	ENSETEG00000012464	-	100	82.648	Echinops_telfairi
MGP_SPRETEiJ_G0025441	Raly	100	99.291	ENSEASG00005008501	RALY	100	88.552	Equus_asinus_asinus
MGP_SPRETEiJ_G0025441	Raly	100	99.291	ENSECAG00000012357	RALY	100	88.179	Equus_caballus
MGP_SPRETEiJ_G0025441	Raly	100	99.291	ENSECAG00000030217	-	100	88.179	Equus_caballus
MGP_SPRETEiJ_G0025441	Raly	100	99.291	ENSECAG00000037642	-	100	88.179	Equus_caballus
MGP_SPRETEiJ_G0025441	Raly	99	78.761	ENSEEUG00000005356	RALY	100	71.885	Erinaceus_europaeus
MGP_SPRETEiJ_G0025441	Raly	94	81.407	ENSELUG00000011138	raly	78	73.707	Esox_lucius
MGP_SPRETEiJ_G0025441	Raly	100	99.291	ENSFCAG00000025252	RALY	100	86.901	Felis_catus
MGP_SPRETEiJ_G0025441	Raly	100	97.872	ENSFDAG00000010175	RALY	100	98.824	Fukomys_damarensis
MGP_SPRETEiJ_G0025441	Raly	100	76.433	ENSFHEG00000018618	raly	82	76.389	Fundulus_heteroclitus
MGP_SPRETEiJ_G0025441	Raly	100	62.420	ENSGMOG00000012589	raly	99	58.371	Gadus_morhua
MGP_SPRETEiJ_G0025441	Raly	100	80.255	ENSGALG00000033696	RALY	100	69.745	Gallus_gallus
MGP_SPRETEiJ_G0025441	Raly	100	72.611	ENSGACG00000003636	raly	81	69.333	Gasterosteus_aculeatus
MGP_SPRETEiJ_G0025441	Raly	100	78.981	ENSGAGG00000016266	RALY	83	68.667	Gopherus_agassizii
MGP_SPRETEiJ_G0025441	Raly	100	95.745	ENSGGOG00000022709	RALY	100	85.859	Gorilla_gorilla
MGP_SPRETEiJ_G0025441	Raly	100	86.525	ENSHBUG00000021321	raly	67	77.778	Haplochromis_burtoni
MGP_SPRETEiJ_G0025441	Raly	100	91.489	ENSHGLG00000021175	-	100	81.145	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025441	Raly	100	97.872	ENSHGLG00000017779	-	100	96.209	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025441	Raly	99	78.095	ENSHGLG00100000278	-	100	65.993	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025441	Raly	100	97.872	ENSHGLG00100003933	RALY	100	97.872	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025441	Raly	100	78.673	ENSHGLG00100003829	-	100	70.370	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025441	Raly	100	62.338	ENSHCOG00000012268	raly	91	54.299	Hippocampus_comes
MGP_SPRETEiJ_G0025441	Raly	100	99.291	ENSSTOG00000008810	RALY	100	88.818	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025441	Raly	100	97.872	ENSJJAG00000008473	Raly	100	97.872	Jaculus_jaculus
MGP_SPRETEiJ_G0025441	Raly	97	75.122	ENSKMAG00000015656	raly	83	75.122	Kryptolebias_marmoratus
MGP_SPRETEiJ_G0025441	Raly	100	77.070	ENSLBEG00000022656	raly	85	73.214	Labrus_bergylta
MGP_SPRETEiJ_G0025441	Raly	60	92.941	ENSLBEG00000028617	raly	93	92.941	Labrus_bergylta
MGP_SPRETEiJ_G0025441	Raly	100	75.796	ENSLACG00000008596	RALY	78	78.924	Latimeria_chalumnae
MGP_SPRETEiJ_G0025441	Raly	100	78.344	ENSLOCG00000007219	raly	79	80.717	Lepisosteus_oculatus
MGP_SPRETEiJ_G0025441	Raly	100	89.172	ENSLAFG00000000321	RALY	100	85.942	Loxodonta_africana
MGP_SPRETEiJ_G0025441	Raly	100	95.745	ENSMFAG00000033131	RALY	100	87.542	Macaca_fascicularis
MGP_SPRETEiJ_G0025441	Raly	100	85.987	ENSMMUG00000018093	RALY	100	85.623	Macaca_mulatta
MGP_SPRETEiJ_G0025441	Raly	100	95.745	ENSMNEG00000044988	RALY	100	86.195	Macaca_nemestrina
MGP_SPRETEiJ_G0025441	Raly	100	95.745	ENSMLEG00000028900	RALY	100	87.205	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025441	Raly	100	86.525	ENSMAMG00000012529	raly	62	78.049	Mastacembelus_armatus
MGP_SPRETEiJ_G0025441	Raly	100	85.816	ENSMZEG00005016550	raly	64	78.283	Maylandia_zebra
MGP_SPRETEiJ_G0025441	Raly	100	80.255	ENSMGAG00000002214	RALY	100	71.019	Meleagris_gallopavo
MGP_SPRETEiJ_G0025441	Raly	100	100.000	ENSMAUG00000005739	Raly	100	99.526	Mesocricetus_auratus
MGP_SPRETEiJ_G0025441	Raly	100	98.582	ENSMICG00000039074	RALY	100	85.522	Microcebus_murinus
MGP_SPRETEiJ_G0025441	Raly	100	100.000	ENSMOCG00000009450	Raly	100	95.033	Microtus_ochrogaster
MGP_SPRETEiJ_G0025441	Raly	100	76.433	ENSMMOG00000013788	raly	86	76.000	Mola_mola
MGP_SPRETEiJ_G0025441	Raly	100	75.904	ENSMODG00000002819	-	100	61.180	Monodelphis_domestica
MGP_SPRETEiJ_G0025441	Raly	100	77.707	ENSMALG00000007071	raly	55	77.315	Monopterus_albus
MGP_SPRETEiJ_G0025441	Raly	100	100.000	MGP_CAROLIEiJ_G0024519	Raly	100	100.000	Mus_caroli
MGP_SPRETEiJ_G0025441	Raly	100	100.000	ENSMUSG00000027593	Raly	100	100.000	Mus_musculus
MGP_SPRETEiJ_G0025441	Raly	100	100.000	MGP_PahariEiJ_G0025963	Raly	100	100.000	Mus_pahari
MGP_SPRETEiJ_G0025441	Raly	100	91.189	ENSMPUG00000017820	RALY	100	87.540	Mustela_putorius_furo
MGP_SPRETEiJ_G0025441	Raly	99	82.143	ENSMLUG00000027895	-	98	77.636	Myotis_lucifugus
MGP_SPRETEiJ_G0025441	Raly	100	99.291	ENSMLUG00000005330	-	100	86.869	Myotis_lucifugus
MGP_SPRETEiJ_G0025441	Raly	100	100.000	ENSNGAG00000001263	Raly	100	99.052	Nannospalax_galili
MGP_SPRETEiJ_G0025441	Raly	100	87.234	ENSNBRG00000014761	raly	67	78.283	Neolamprologus_brichardi
MGP_SPRETEiJ_G0025441	Raly	87	72.161	ENSNLEG00000010031	-	86	75.581	Nomascus_leucogenys
MGP_SPRETEiJ_G0025441	Raly	100	87.261	ENSOPRG00000008423	RALY	100	85.623	Ochotona_princeps
MGP_SPRETEiJ_G0025441	Raly	100	90.260	ENSODEG00000008369	-	100	80.831	Octodon_degus
MGP_SPRETEiJ_G0025441	Raly	84	81.461	ENSODEG00000011160	-	100	71.481	Octodon_degus
MGP_SPRETEiJ_G0025441	Raly	100	82.270	ENSODEG00000012831	-	100	84.772	Octodon_degus
MGP_SPRETEiJ_G0025441	Raly	100	77.070	ENSONIG00000004416	raly	75	76.037	Oreochromis_niloticus
MGP_SPRETEiJ_G0025441	Raly	100	87.898	ENSOCUG00000000477	RALY	86	88.050	Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025441	Raly	100	87.898	ENSOGAG00000032337	RALY	100	81.150	Otolemur_garnettii
MGP_SPRETEiJ_G0025441	Raly	100	90.749	ENSOARG00000008957	RALY	100	86.262	Ovis_aries
MGP_SPRETEiJ_G0025441	Raly	100	95.745	ENSPPAG00000034951	RALY	100	85.185	Pan_paniscus
MGP_SPRETEiJ_G0025441	Raly	100	99.291	ENSPPRG00000014593	RALY	100	88.215	Panthera_pardus
MGP_SPRETEiJ_G0025441	Raly	100	99.291	ENSPTIG00000021910	RALY	100	88.215	Panthera_tigris_altaica
MGP_SPRETEiJ_G0025441	Raly	100	95.745	ENSPTRG00000013410	RALY	100	85.859	Pan_troglodytes
MGP_SPRETEiJ_G0025441	Raly	100	95.745	ENSPANG00000018093	RALY	100	86.869	Papio_anubis
MGP_SPRETEiJ_G0025441	Raly	100	78.981	ENSPKIG00000004894	raly	77	79.358	Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025441	Raly	79	91.964	ENSPSIG00000017714	RALY	96	59.807	Pelodiscus_sinensis
MGP_SPRETEiJ_G0025441	Raly	72	83.333	ENSPMGG00000007007	raly	94	83.333	Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025441	Raly	100	100.000	ENSPEMG00000021466	Raly	100	91.579	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025441	Raly	63	69.663	ENSPCIG00000014019	-	100	69.663	Phascolarctos_cinereus
MGP_SPRETEiJ_G0025441	Raly	100	80.255	ENSPCIG00000011153	-	100	65.495	Phascolarctos_cinereus
MGP_SPRETEiJ_G0025441	Raly	100	86.624	ENSPPYG00000010932	RALY	100	85.623	Pongo_abelii
MGP_SPRETEiJ_G0025441	Raly	99	84.071	ENSPCAG00000016867	RALY	99	81.271	Procavia_capensis
MGP_SPRETEiJ_G0025441	Raly	100	97.872	ENSPCOG00000016363	RALY	100	86.195	Propithecus_coquereli
MGP_SPRETEiJ_G0025441	Raly	100	90.749	ENSPVAG00000015827	RALY	100	86.901	Pteropus_vampyrus
MGP_SPRETEiJ_G0025441	Raly	100	85.106	ENSPNYG00000011247	raly	64	78.283	Pundamilia_nyererei
MGP_SPRETEiJ_G0025441	Raly	100	77.707	ENSPNAG00000011812	raly	79	78.027	Pygocentrus_nattereri
MGP_SPRETEiJ_G0025441	Raly	100	100.000	ENSRNOG00000017405	Raly	100	92.013	Rattus_norvegicus
MGP_SPRETEiJ_G0025441	Raly	100	95.745	ENSRBIG00000030203	RALY	100	88.294	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025441	Raly	100	95.745	ENSRROG00000038781	RALY	100	87.960	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025441	Raly	100	96.454	ENSSBOG00000001418	RALY	100	88.889	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025441	Raly	100	88.652	ENSSHAG00000016830	RALY	100	65.993	Sarcophilus_harrisii
MGP_SPRETEiJ_G0025441	Raly	100	76.433	ENSSFOG00015012304	raly	81	79.817	Scleropages_formosus
MGP_SPRETEiJ_G0025441	Raly	100	74.522	ENSSMAG00000001107	raly	73	73.636	Scophthalmus_maximus
MGP_SPRETEiJ_G0025441	Raly	100	77.707	ENSSDUG00000002411	raly	73	76.959	Seriola_dumerili
MGP_SPRETEiJ_G0025441	Raly	55	93.506	ENSSLDG00000004903	RALY	77	93.506	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025441	Raly	100	77.707	ENSSLDG00000017872	raly	71	78.037	Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025441	Raly	96	77.626	ENSSARG00000002763	-	100	65.495	Sorex_araneus
MGP_SPRETEiJ_G0025441	Raly	100	80.255	ENSSPUG00000006251	RALY	84	86.239	Sphenodon_punctatus
MGP_SPRETEiJ_G0025441	Raly	81	77.692	ENSSPAG00000022480	-	76	74.872	Stegastes_partitus
MGP_SPRETEiJ_G0025441	Raly	100	98.582	ENSSSCG00000007275	RALY	100	87.460	Sus_scrofa
MGP_SPRETEiJ_G0025441	Raly	100	78.981	ENSTGUG00000003715	RALY	100	87.037	Taeniopygia_guttata
MGP_SPRETEiJ_G0025441	Raly	100	78.855	ENSTBEG00000009812	RALY	100	74.522	Tupaia_belangeri
MGP_SPRETEiJ_G0025441	Raly	100	89.474	ENSTTRG00000006590	RALY	100	85.669	Tursiops_truncatus
MGP_SPRETEiJ_G0025441	Raly	100	99.291	ENSUAMG00000006993	RALY	99	86.760	Ursus_americanus
MGP_SPRETEiJ_G0025441	Raly	100	99.291	ENSUMAG00000024106	RALY	100	87.540	Ursus_maritimus
MGP_SPRETEiJ_G0025441	Raly	100	87.261	ENSVPAG00000000373	RALY	76	94.340	Vicugna_pacos
MGP_SPRETEiJ_G0025441	Raly	100	91.630	ENSVVUG00000004546	RALY	100	87.540	Vulpes_vulpes
MGP_SPRETEiJ_G0025441	Raly	100	72.941	ENSXETG00000019514	raly	79	72.926	Xenopus_tropicalis