EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_SPRETEiJ_G0025473 (Gene tree)
Gene ID: -
Gene Symbol: Rbm12
Alias: 5730420G12Rik|9430070C08Rik|SWAN
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Mus_spretus
Status: putative
Strand: Minus strand
Length: 19740 bases
Position: chr2:157873353-157893092
Accession: 1922960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_SPRETEiJ_P0057781	RRM_1	PF00076.22	5.8e-29	1	3
MGP_SPRETEiJ_P0057781	RRM_1	PF00076.22	5.8e-29	2	3
MGP_SPRETEiJ_P0057781	RRM_1	PF00076.22	5.8e-29	3	3
MGP_SPRETEiJ_P0057782	RRM_1	PF00076.22	5.8e-29	1	3
MGP_SPRETEiJ_P0057782	RRM_1	PF00076.22	5.8e-29	2	3
MGP_SPRETEiJ_P0057782	RRM_1	PF00076.22	5.8e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_SPRETEiJ_T0057782	-	6687	-	MGP_SPRETEiJ_P0057782	1002 (aa)	-	-
MGP_SPRETEiJ_T0057783	-	1058	-	MGP_SPRETEiJ_P0057783	288 (aa)	-	-
MGP_SPRETEiJ_T0057781	-	6655	-	MGP_SPRETEiJ_P0057781	1002 (aa)	-	-
MGP_SPRETEiJ_T0057784	-	574	-	MGP_SPRETEiJ_P0057784	143 (aa)	-	-
MGP_SPRETEiJ_T0057785	-	560	-	MGP_SPRETEiJ_P0057785	133 (aa)	-	-

Gene Model

Click here to download MGP_SPRETEiJ_G0025473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_SPRETEiJ_G0025473	Rbm12	56	71.264	MGP_SPRETEiJ_G0026766	-	68	71.264
MGP_SPRETEiJ_G0025473	Rbm12	56	71.264	MGP_SPRETEiJ_G0026765	-	56	71.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_SPRETEiJ_G0025473	Rbm12	99	93.010	ENSG00000244462	RBM12	100	98.601	Homo_sapiens
MGP_SPRETEiJ_G0025473	Rbm12	96	95.075	ENSAMEG00000019189	RBM12	100	86.355	Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025473	Rbm12	90	81.707	ENSACAG00000006330	RBM12	72	81.707	Anolis_carolinensis
MGP_SPRETEiJ_G0025473	Rbm12	100	91.983	ENSANAG00000032596	RBM12	71	94.265	Aotus_nancymaae
MGP_SPRETEiJ_G0025473	Rbm12	100	86.853	ENSBTAG00000044015	RBM12	100	86.454	Bos_taurus
MGP_SPRETEiJ_G0025473	Rbm12	89	96.018	ENSCAFG00000008256	RBM12	98	96.018	Canis_familiaris
MGP_SPRETEiJ_G0025473	Rbm12	88	95.751	ENSCAFG00020005650	RBM12	74	95.000	Canis_lupus_dingo
MGP_SPRETEiJ_G0025473	Rbm12	100	83.964	ENSCHIG00000024592	RBM12	74	93.695	Capra_hircus
MGP_SPRETEiJ_G0025473	Rbm12	95	93.440	ENSTSYG00000030563	RBM12	73	94.083	Carlito_syrichta
MGP_SPRETEiJ_G0025473	Rbm12	86	88.331	ENSCAPG00000006176	RBM12	96	86.590	Cavia_aperea
MGP_SPRETEiJ_G0025473	Rbm12	100	88.294	ENSCPOG00000035170	RBM12	100	87.033	Cavia_porcellus
MGP_SPRETEiJ_G0025473	Rbm12	96	89.568	ENSCCAG00000036056	-	71	92.031	Cebus_capucinus
MGP_SPRETEiJ_G0025473	Rbm12	87	89.362	ENSCCAG00000035899	-	100	89.617	Cebus_capucinus
MGP_SPRETEiJ_G0025473	Rbm12	99	92.582	ENSCATG00000030934	RBM12	71	93.971	Cercocebus_atys
MGP_SPRETEiJ_G0025473	Rbm12	100	88.922	ENSCLAG00000017230	RBM12	100	86.759	Chinchilla_lanigera
MGP_SPRETEiJ_G0025473	Rbm12	99	92.582	ENSCANG00000030552	RBM12	71	93.971	Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025473	Rbm12	100	95.010	ENSCGRG00001021144	Rbm12	100	94.012	Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025473	Rbm12	100	95.010	ENSCGRG00000012719	Rbm12	100	94.012	Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025473	Rbm12	100	82.635	ENSDORG00000000606	-	100	81.954	Dipodomys_ordii
MGP_SPRETEiJ_G0025473	Rbm12	100	88.147	ENSDORG00000028509	-	100	88.259	Dipodomys_ordii
MGP_SPRETEiJ_G0025473	Rbm12	100	84.179	ENSECAG00000021997	RBM12	73	94.412	Equus_caballus
MGP_SPRETEiJ_G0025473	Rbm12	59	95.699	ENSEEUG00000008858	-	51	95.699	Erinaceus_europaeus
MGP_SPRETEiJ_G0025473	Rbm12	99	93.153	ENSFDAG00000014663	RBM12	73	94.265	Fukomys_damarensis
MGP_SPRETEiJ_G0025473	Rbm12	88	84.485	ENSGALG00000030253	RBM12	100	85.407	Gallus_gallus
MGP_SPRETEiJ_G0025473	Rbm12	99	92.725	ENSGGOG00000028500	RBM12	71	94.118	Gorilla_gorilla
MGP_SPRETEiJ_G0025473	Rbm12	100	88.147	ENSHGLG00000013208	RBM12	100	87.649	Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025473	Rbm12	83	96.238	ENSHGLG00100019158	RBM12	90	96.238	Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025473	Rbm12	100	84.148	ENSSTOG00000019739	RBM12	100	85.130	Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025473	Rbm12	100	77.037	ENSJJAG00000009879	-	54	87.245	Jaculus_jaculus
MGP_SPRETEiJ_G0025473	Rbm12	100	83.765	ENSLAFG00000010341	RBM12	100	85.259	Loxodonta_africana
MGP_SPRETEiJ_G0025473	Rbm12	99	92.582	ENSMFAG00000032583	RBM12	71	94.118	Macaca_fascicularis
MGP_SPRETEiJ_G0025473	Rbm12	99	92.725	ENSMMUG00000020960	CPNE1	74	93.411	Macaca_mulatta
MGP_SPRETEiJ_G0025473	Rbm12	99	92.725	ENSMNEG00000045365	RBM12	71	94.118	Macaca_nemestrina
MGP_SPRETEiJ_G0025473	Rbm12	99	92.725	ENSMLEG00000032492	RBM12	71	94.118	Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025473	Rbm12	96	78.689	ENSMGAG00000001502	RBM12	100	85.714	Meleagris_gallopavo
MGP_SPRETEiJ_G0025473	Rbm12	100	95.709	ENSMAUG00000012800	Rbm12	100	94.340	Mesocricetus_auratus
MGP_SPRETEiJ_G0025473	Rbm12	92	94.689	ENSMICG00000032761	-	73	93.824	Microcebus_murinus
MGP_SPRETEiJ_G0025473	Rbm12	98	82.686	ENSMICG00000029540	-	73	75.130	Microcebus_murinus
MGP_SPRETEiJ_G0025473	Rbm12	100	95.110	ENSMOCG00000012950	Rbm12	100	93.613	Microtus_ochrogaster
MGP_SPRETEiJ_G0025473	Rbm12	97	84.050	ENSMODG00000001591	RBM12	98	89.634	Monodelphis_domestica
MGP_SPRETEiJ_G0025473	Rbm12	100	98.411	MGP_CAROLIEiJ_G0024551	Rbm12	100	98.411	Mus_caroli
MGP_SPRETEiJ_G0025473	Rbm12	100	98.303	ENSMUSG00000089824	Rbm12	100	98.303	Mus_musculus
MGP_SPRETEiJ_G0025473	Rbm12	100	97.716	MGP_PahariEiJ_G0025996	Rbm12	100	97.716	Mus_pahari
MGP_SPRETEiJ_G0025473	Rbm12	97	93.741	ENSMPUG00000017789	-	74	94.265	Mustela_putorius_furo
MGP_SPRETEiJ_G0025473	Rbm12	100	83.964	ENSMLUG00000011217	RBM12	72	94.412	Myotis_lucifugus
MGP_SPRETEiJ_G0025473	Rbm12	100	93.413	ENSNGAG00000015846	Rbm12	100	91.502	Nannospalax_galili
MGP_SPRETEiJ_G0025473	Rbm12	100	84.623	ENSNLEG00000010268	RBM12	71	94.559	Nomascus_leucogenys
MGP_SPRETEiJ_G0025473	Rbm12	91	86.787	ENSMEUG00000007621	RBM12	74	87.204	Notamacropus_eugenii
MGP_SPRETEiJ_G0025473	Rbm12	100	82.968	ENSOPRG00000005687	RBM12	100	84.462	Ochotona_princeps
MGP_SPRETEiJ_G0025473	Rbm12	100	85.630	ENSODEG00000013870	RBM12	100	84.848	Octodon_degus
MGP_SPRETEiJ_G0025473	Rbm12	99	93.010	ENSPPAG00000040719	RBM12	71	94.412	Pan_paniscus
MGP_SPRETEiJ_G0025473	Rbm12	99	93.010	ENSPTRG00000013446	RBM12	71	94.412	Pan_troglodytes
MGP_SPRETEiJ_G0025473	Rbm12	99	93.010	ENSPTRG00000040708	-	71	94.412	Pan_troglodytes
MGP_SPRETEiJ_G0025473	Rbm12	99	92.725	ENSPANG00000020003	CPNE1	71	94.118	Papio_anubis
MGP_SPRETEiJ_G0025473	Rbm12	82	84.923	ENSPSIG00000007369	RBM12	98	84.923	Pelodiscus_sinensis
MGP_SPRETEiJ_G0025473	Rbm12	100	96.407	ENSPEMG00000017769	Rbm12	100	96.407	Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025473	Rbm12	55	82.609	ENSPFOG00000023551	rbm12	92	78.873	Poecilia_formosa
MGP_SPRETEiJ_G0025473	Rbm12	99	92.867	ENSPPYG00000010960	RBM12	73	94.265	Pongo_abelii
MGP_SPRETEiJ_G0025473	Rbm12	95	92.052	ENSPCAG00000008653	RBM12	100	83.932	Procavia_capensis
MGP_SPRETEiJ_G0025473	Rbm12	98	93.391	ENSPCOG00000023724	RBM12	72	93.824	Propithecus_coquereli
MGP_SPRETEiJ_G0025473	Rbm12	84	83.057	ENSPVAG00000014937	RBM12	73	93.971	Pteropus_vampyrus
MGP_SPRETEiJ_G0025473	Rbm12	100	94.283	ENSRNOG00000049913	LOC100910990	100	89.639	Rattus_norvegicus
MGP_SPRETEiJ_G0025473	Rbm12	100	94.283	ENSRNOG00000019723	Rbm12	100	89.639	Rattus_norvegicus
MGP_SPRETEiJ_G0025473	Rbm12	99	92.582	ENSRBIG00000042965	RBM12	71	93.971	Rhinopithecus_bieti
MGP_SPRETEiJ_G0025473	Rbm12	99	92.582	ENSRROG00000037485	RBM12	71	93.971	Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025473	Rbm12	100	83.300	ENSSBOG00000027633	RBM12	71	94.118	Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025473	Rbm12	92	88.589	ENSSHAG00000018585	RBM12	100	89.634	Sarcophilus_harrisii
MGP_SPRETEiJ_G0025473	Rbm12	100	84.960	ENSSSCG00000036156	RBM12	100	86.653	Sus_scrofa
MGP_SPRETEiJ_G0025473	Rbm12	90	85.692	ENSTGUG00000003002	RBM12	100	85.213	Taeniopygia_guttata
MGP_SPRETEiJ_G0025473	Rbm12	100	84.179	ENSTTRG00000017035	RBM12	73	94.412	Tursiops_truncatus
MGP_SPRETEiJ_G0025473	Rbm12	97	94.651	ENSUAMG00000010430	RBM12	100	86.155	Ursus_americanus
MGP_SPRETEiJ_G0025473	Rbm12	88	100.000	ENSVPAG00000003812	RBM12	91	100.000	Vicugna_pacos
MGP_SPRETEiJ_G0025473	Rbm12	90	63.716	ENSXETG00000033541	RBM12	72	62.530	Xenopus_tropicalis