EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_SPRETEiJ_G0025528 (Gene tree)
Gene ID
-
Gene Symbol
Srsf6
Alias
1210001E11Rik|Sfrs6
Full Name
serine/arginine-rich splicing factor 6
Gene Type
protein_coding
Species
Mus_spretus
Status
putative
Strand
Plus strand
Length
7370 bases
Position
chr2:164976791-164984160
Accession
1915246
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_SPRETEiJ_P0058088RRM_1PF00076.228.4e-3212
MGP_SPRETEiJ_P0058088RRM_1PF00076.228.4e-3222
MGP_SPRETEiJ_P0058090RRM_1PF00076.222e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_SPRETEiJ_T0058088-3530-MGP_SPRETEiJ_P0058088339 (aa)-UPI0000192A3C
MGP_SPRETEiJ_T0058089-1666-MGP_SPRETEiJ_P0058089135 (aa)-UPI00001CF3B4
MGP_SPRETEiJ_T0058090-515-MGP_SPRETEiJ_P0058090135 (aa)-UPI00001CF3B4
MGP_SPRETEiJ_T0058087-2887--- (aa)--
Gene Model
Click here to download MGP_SPRETEiJ_G0025528's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_SPRETEiJ_G0025528's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_SPRETEiJ_G0025528Srsf65147.297MGP_SPRETEiJ_G0028620Srsf97038.674
MGP_SPRETEiJ_G0025528Srsf65840.670MGP_SPRETEiJ_G0017790Srsf18242.857
MGP_SPRETEiJ_G0025528Srsf65335.443MGP_SPRETEiJ_G0034253Rbmx7735.443
MGP_SPRETEiJ_G0025528Srsf66131.868MGP_SPRETEiJ_G0016386Cirbp8431.868
MGP_SPRETEiJ_G0025528Srsf65635.526MGP_SPRETEiJ_G0025441Raly5435.526
MGP_SPRETEiJ_G0025528Srsf65640.506MGP_SPRETEiJ_G0020726-5040.506
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_SPRETEiJ_G0025528Srsf610098.519ENSG00000124193SRSF610098.519Homo_sapiens
MGP_SPRETEiJ_G0025528Srsf65893.590ENSAPOG00000016635-8481.618Acanthochromis_polyacanthus
MGP_SPRETEiJ_G0025528Srsf69585.231ENSAMEG00000003710SRSF69484.877Ailuropoda_melanoleuca
MGP_SPRETEiJ_G0025528Srsf68768.581ENSACIG00000023658-5687.778Amphilophus_citrinellus
MGP_SPRETEiJ_G0025528Srsf66387.059ENSACIG00000020091-9580.315Amphilophus_citrinellus
MGP_SPRETEiJ_G0025528Srsf69267.939ENSAOCG00000019438-9867.939Amphiprion_ocellaris
MGP_SPRETEiJ_G0025528Srsf66582.955ENSAOCG00000004309-5783.152Amphiprion_ocellaris
MGP_SPRETEiJ_G0025528Srsf69861.871ENSAPEG00000013086-5388.172Amphiprion_percula
MGP_SPRETEiJ_G0025528Srsf66384.706ENSAPEG00000020746-6679.787Amphiprion_percula
MGP_SPRETEiJ_G0025528Srsf66683.146ENSATEG00000007255-5480.978Anabas_testudineus
MGP_SPRETEiJ_G0025528Srsf610082.029ENSACAG00000002061SRSF69883.188Anolis_carolinensis
MGP_SPRETEiJ_G0025528Srsf610098.519ENSANAG00000024080SRSF610098.519Aotus_nancymaae
MGP_SPRETEiJ_G0025528Srsf65489.041ENSACLG00000024373-9679.570Astatotilapia_calliptera
MGP_SPRETEiJ_G0025528Srsf65590.541ENSAMXG00000003101-5184.737Astyanax_mexicanus
MGP_SPRETEiJ_G0025528Srsf65591.892ENSAMXG00000042692-9678.519Astyanax_mexicanus
MGP_SPRETEiJ_G0025528Srsf610099.259ENSBTAG00000008527SRSF610099.259Bos_taurus
MGP_SPRETEiJ_G0025528Srsf610098.519ENSCJAG00000048403SRSF610098.519Callithrix_jacchus
MGP_SPRETEiJ_G0025528Srsf610099.259ENSCAFG00000009289SRSF610099.259Canis_familiaris
MGP_SPRETEiJ_G0025528Srsf610099.259ENSCAFG00020013559SRSF610099.259Canis_lupus_dingo
MGP_SPRETEiJ_G0025528Srsf69596.296ENSCHIG00000009148-9496.296Capra_hircus
MGP_SPRETEiJ_G0025528Srsf610099.259ENSCHIG00000015890-10099.259Capra_hircus
MGP_SPRETEiJ_G0025528Srsf69480.435ENSTSYG00000026476SRSF69378.086Carlito_syrichta
MGP_SPRETEiJ_G0025528Srsf610098.519ENSCPOG00000011761SRSF610098.519Cavia_porcellus
MGP_SPRETEiJ_G0025528Srsf610098.519ENSCCAG00000026018-10098.519Cebus_capucinus
MGP_SPRETEiJ_G0025528Srsf69566.967ENSCCAG00000018540-6287.234Cebus_capucinus
MGP_SPRETEiJ_G0025528Srsf610098.519ENSCATG00000030794SRSF610098.519Cercocebus_atys
MGP_SPRETEiJ_G0025528Srsf610098.519ENSCLAG00000010247SRSF610098.519Chinchilla_lanigera
MGP_SPRETEiJ_G0025528Srsf69997.041ENSCSAG00000014022SRSF69997.041Chlorocebus_sabaeus
MGP_SPRETEiJ_G0025528Srsf67997.222ENSCHOG00000000561SRSF67797.222Choloepus_hoffmanni
MGP_SPRETEiJ_G0025528Srsf65894.872ENSCPBG00000018200SRSF69484.404Chrysemys_picta_bellii
MGP_SPRETEiJ_G0025528Srsf69982.544ENSCANG00000042529-9882.544Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025528Srsf69996.746ENSCANG00000037774-9996.746Colobus_angolensis_palliatus
MGP_SPRETEiJ_G0025528Srsf6100100.000ENSCGRG00001022339Srsf6100100.000Cricetulus_griseus_chok1gshd
MGP_SPRETEiJ_G0025528Srsf66299.048ENSCGRG00000006618Srsf610099.048Cricetulus_griseus_crigri
MGP_SPRETEiJ_G0025528Srsf65893.590ENSCSEG00000019778SRSF69084.252Cynoglossus_semilaevis
MGP_SPRETEiJ_G0025528Srsf65892.308ENSCVAG00000001863SRSF69585.039Cyprinodon_variegatus
MGP_SPRETEiJ_G0025528Srsf65590.541ENSDARG00000016783srsf6b8789.157Danio_rerio
MGP_SPRETEiJ_G0025528Srsf69595.679ENSDNOG00000008410SRSF69495.679Dasypus_novemcinctus
MGP_SPRETEiJ_G0025528Srsf610098.519ENSDORG00000028378Srsf610098.519Dipodomys_ordii
MGP_SPRETEiJ_G0025528Srsf69491.875ENSETEG00000006221SRSF69489.506Echinops_telfairi
MGP_SPRETEiJ_G0025528Srsf69595.062ENSEASG00005023429SRSF69495.988Equus_asinus_asinus
MGP_SPRETEiJ_G0025528Srsf69595.062ENSECAG00000023932SRSF69495.988Equus_caballus
MGP_SPRETEiJ_G0025528Srsf65792.821ENSEEUG00000002324SRSF69093.401Erinaceus_europaeus
MGP_SPRETEiJ_G0025528Srsf69859.286ENSELUG00000024182SRSF68587.356Esox_lucius
MGP_SPRETEiJ_G0025528Srsf67377.778ENSELUG00000013506SRSF68877.778Esox_lucius
MGP_SPRETEiJ_G0025528Srsf69596.605ENSFCAG00000032814SRSF69496.285Felis_catus
MGP_SPRETEiJ_G0025528Srsf69580.556ENSFDAG00000012191SRSF69378.086Fukomys_damarensis
MGP_SPRETEiJ_G0025528Srsf68871.287ENSFHEG00000023065srsf6a5587.500Fundulus_heteroclitus
MGP_SPRETEiJ_G0025528Srsf66176.829ENSGMOG00000006105srsf6a6270.391Gadus_morhua
MGP_SPRETEiJ_G0025528Srsf65688.158ENSGMOG00000014458srsf6a5277.604Gadus_morhua
MGP_SPRETEiJ_G0025528Srsf610095.556ENSGALG00000000990SRSF610095.556Gallus_gallus
MGP_SPRETEiJ_G0025528Srsf65892.308ENSGAFG00000019088-7282.400Gambusia_affinis
MGP_SPRETEiJ_G0025528Srsf69861.194ENSGACG00000006084srsf6a5383.871Gasterosteus_aculeatus
MGP_SPRETEiJ_G0025528Srsf65894.872ENSGAGG00000003238SRSF69484.404Gopherus_agassizii
MGP_SPRETEiJ_G0025528Srsf610098.519ENSGGOG00000009808SRSF610098.519Gorilla_gorilla
MGP_SPRETEiJ_G0025528Srsf610059.538ENSHBUG00000006386-5883.696Haplochromis_burtoni
MGP_SPRETEiJ_G0025528Srsf610098.519ENSHGLG00000007348SRSF610098.519Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025528Srsf69175.728ENSHGLG00000007701-5878.610Heterocephalus_glaber_female
MGP_SPRETEiJ_G0025528Srsf69580.864ENSHGLG00100005043SRSF69378.395Heterocephalus_glaber_male
MGP_SPRETEiJ_G0025528Srsf65887.179ENSHCOG00000002740srsf6a5782.065Hippocampus_comes
MGP_SPRETEiJ_G0025528Srsf65892.308ENSIPUG00000004776-7272.103Ictalurus_punctatus
MGP_SPRETEiJ_G0025528Srsf610098.519ENSSTOG00000010866SRSF610098.519Ictidomys_tridecemlineatus
MGP_SPRETEiJ_G0025528Srsf65696.335ENSJJAG00000020690Srsf69196.373Jaculus_jaculus
MGP_SPRETEiJ_G0025528Srsf65493.151ENSKMAG00000011934srsf6a5985.870Kryptolebias_marmoratus
MGP_SPRETEiJ_G0025528Srsf65892.308ENSLBEG00000007356srsf6a5285.484Labrus_bergylta
MGP_SPRETEiJ_G0025528Srsf610078.409ENSLACG00000005466SRSF610074.269Latimeria_chalumnae
MGP_SPRETEiJ_G0025528Srsf67093.724ENSLAFG00000006682SRSF68993.886Loxodonta_africana
MGP_SPRETEiJ_G0025528Srsf610098.519ENSMFAG00000036925SRSF610098.519Macaca_fascicularis
MGP_SPRETEiJ_G0025528Srsf610098.519ENSMMUG00000006742SRSF610098.519Macaca_mulatta
MGP_SPRETEiJ_G0025528Srsf69496.250ENSMNEG00000038270-9496.273Macaca_nemestrina
MGP_SPRETEiJ_G0025528Srsf610097.037ENSMNEG00000027392-10097.037Macaca_nemestrina
MGP_SPRETEiJ_G0025528Srsf65796.891ENSMLEG00000031524SRSF69096.891Mandrillus_leucophaeus
MGP_SPRETEiJ_G0025528Srsf69861.871ENSMAMG00000017161srsf6a5387.634Mastacembelus_armatus
MGP_SPRETEiJ_G0025528Srsf66387.059ENSMAMG00000023477-8987.059Mastacembelus_armatus
MGP_SPRETEiJ_G0025528Srsf69858.333ENSMZEG00005020658-6082.873Maylandia_zebra
MGP_SPRETEiJ_G0025528Srsf65689.474ENSMZEG00005008032-5783.696Maylandia_zebra
MGP_SPRETEiJ_G0025528Srsf6100100.000ENSMAUG00000019086-100100.000Mesocricetus_auratus
MGP_SPRETEiJ_G0025528Srsf610098.519ENSMICG00000008537SRSF610098.519Microcebus_murinus
MGP_SPRETEiJ_G0025528Srsf66299.048ENSMOCG00000018738Srsf610099.048Microtus_ochrogaster
MGP_SPRETEiJ_G0025528Srsf65892.308ENSMMOG00000015241-7890.361Mola_mola
MGP_SPRETEiJ_G0025528Srsf65894.872ENSMODG00000003107SRSF69586.997Monodelphis_domestica
MGP_SPRETEiJ_G0025528Srsf6100100.000MGP_CAROLIEiJ_G0024606Srsf6100100.000Mus_caroli
MGP_SPRETEiJ_G0025528Srsf6100100.000ENSMUSG00000016921Srsf6100100.000Mus_musculus
MGP_SPRETEiJ_G0025528Srsf6100100.000MGP_PahariEiJ_G0026050Srsf6100100.000Mus_pahari
MGP_SPRETEiJ_G0025528Srsf68496.516ENSMPUG00000017692SRSF69996.516Mustela_putorius_furo
MGP_SPRETEiJ_G0025528Srsf69480.435ENSMLUG00000016618SRSF69480.556Myotis_lucifugus
MGP_SPRETEiJ_G0025528Srsf610098.519ENSNGAG00000017560Srsf610098.519Nannospalax_galili
MGP_SPRETEiJ_G0025528Srsf69861.871ENSNBRG00000001846-5287.634Neolamprologus_brichardi
MGP_SPRETEiJ_G0025528Srsf65689.474ENSNBRG00000014709-5883.696Neolamprologus_brichardi
MGP_SPRETEiJ_G0025528Srsf610098.519ENSNLEG00000006524SRSF610098.519Nomascus_leucogenys
MGP_SPRETEiJ_G0025528Srsf65894.872ENSMEUG00000014615SRSF66295.745Notamacropus_eugenii
MGP_SPRETEiJ_G0025528Srsf67094.979ENSOPRG00000002017-8995.197Ochotona_princeps
MGP_SPRETEiJ_G0025528Srsf610098.519ENSODEG00000016510-10098.519Octodon_degus
MGP_SPRETEiJ_G0025528Srsf65893.590ENSONIG00000001925-6672.766Oreochromis_niloticus
MGP_SPRETEiJ_G0025528Srsf66186.585ENSONIG00000020247-5384.239Oreochromis_niloticus
MGP_SPRETEiJ_G0025528Srsf67557.874ENSOCUG00000023999-7063.128Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025528Srsf69839.865ENSOCUG00000009785-6476.804Oryctolagus_cuniculus
MGP_SPRETEiJ_G0025528Srsf65892.308ENSORLG00020017506srsf6a9069.032Oryzias_latipes_hni
MGP_SPRETEiJ_G0025528Srsf69595.077ENSOGAG00000014468SRSF69495.370Otolemur_garnettii
MGP_SPRETEiJ_G0025528Srsf69493.168ENSOARG00000003117SRSF69493.210Ovis_aries
MGP_SPRETEiJ_G0025528Srsf610095.930ENSPPAG00000034327-10095.930Pan_paniscus
MGP_SPRETEiJ_G0025528Srsf69184.466ENSPPAG00000043131-10086.731Pan_paniscus
MGP_SPRETEiJ_G0025528Srsf69596.605ENSPPRG00000008917SRSF69496.285Panthera_pardus
MGP_SPRETEiJ_G0025528Srsf65795.385ENSPTIG00000019153SRSF69094.845Panthera_tigris_altaica
MGP_SPRETEiJ_G0025528Srsf610098.519ENSPTRG00000044686-10098.519Pan_troglodytes
MGP_SPRETEiJ_G0025528Srsf69184.466ENSPTRG00000046274-10086.731Pan_troglodytes
MGP_SPRETEiJ_G0025528Srsf610098.519ENSPANG00000035224SRSF610098.519Papio_anubis
MGP_SPRETEiJ_G0025528Srsf69862.121ENSPKIG00000018463-8389.286Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025528Srsf65975.000ENSPKIG00000015703-9560.403Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025528Srsf65893.590ENSPKIG00000015603-8884.252Paramormyrops_kingsleyae
MGP_SPRETEiJ_G0025528Srsf69072.078ENSPMGG00000014963srsf6a5589.130Periophthalmus_magnuspinnatus
MGP_SPRETEiJ_G0025528Srsf68588.793ENSPEMG00000022405-9688.793Peromyscus_maniculatus_bairdii
MGP_SPRETEiJ_G0025528Srsf610097.037ENSPCIG00000003820SRSF610097.037Phascolarctos_cinereus
MGP_SPRETEiJ_G0025528Srsf65892.308ENSPFOG00000006437srsf6a5083.158Poecilia_formosa
MGP_SPRETEiJ_G0025528Srsf65892.308ENSPLAG00000009243srsf6a8082.677Poecilia_latipinna
MGP_SPRETEiJ_G0025528Srsf65892.308ENSPMEG00000006042SRSF65487.027Poecilia_mexicana
MGP_SPRETEiJ_G0025528Srsf65892.308ENSPREG00000001040srsf6a8783.846Poecilia_reticulata
MGP_SPRETEiJ_G0025528Srsf610096.221ENSPPYG00000011019SRSF610096.221Pongo_abelii
MGP_SPRETEiJ_G0025528Srsf65896.154ENSPCAG00000010954SRSF69691.615Procavia_capensis
MGP_SPRETEiJ_G0025528Srsf610098.519ENSPCOG00000026364SRSF610098.519Propithecus_coquereli
MGP_SPRETEiJ_G0025528Srsf69595.031ENSPVAG00000015232SRSF69495.031Pteropus_vampyrus
MGP_SPRETEiJ_G0025528Srsf65689.474ENSPNYG00000004944-5883.696Pundamilia_nyererei
MGP_SPRETEiJ_G0025528Srsf65893.590ENSPNYG00000011272-5187.634Pundamilia_nyererei
MGP_SPRETEiJ_G0025528Srsf66091.358ENSPNAG00000023179-9482.677Pygocentrus_nattereri
MGP_SPRETEiJ_G0025528Srsf6100100.000ENSRNOG00000006380Srsf6100100.000Rattus_norvegicus
MGP_SPRETEiJ_G0025528Srsf610094.815ENSRBIG00000041414SRSF610094.815Rhinopithecus_bieti
MGP_SPRETEiJ_G0025528Srsf610098.519ENSRROG00000029989SRSF610098.519Rhinopithecus_roxellana
MGP_SPRETEiJ_G0025528Srsf610098.519ENSSBOG00000033708-10098.519Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025528Srsf69470.219ENSSBOG00000034078-5476.796Saimiri_boliviensis_boliviensis
MGP_SPRETEiJ_G0025528Srsf65894.872ENSSHAG00000012805SRSF69586.997Sarcophilus_harrisii
MGP_SPRETEiJ_G0025528Srsf65593.243ENSSFOG00015015169SRSF66089.130Scleropages_formosus
MGP_SPRETEiJ_G0025528Srsf65990.000ENSSMAG00000014861-9566.406Scophthalmus_maximus
MGP_SPRETEiJ_G0025528Srsf65688.158ENSSMAG00000017447-5579.891Scophthalmus_maximus
MGP_SPRETEiJ_G0025528Srsf66387.059ENSSDUG00000011036-9087.059Seriola_dumerili
MGP_SPRETEiJ_G0025528Srsf69861.151ENSSDUG00000016097srsf6a5387.634Seriola_dumerili
MGP_SPRETEiJ_G0025528Srsf69861.871ENSSLDG00000022841srsf6a5487.634Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025528Srsf66387.059ENSSLDG00000014858-9087.059Seriola_lalandi_dorsalis
MGP_SPRETEiJ_G0025528Srsf610095.556ENSSPUG00000004967SRSF610095.556Sphenodon_punctatus
MGP_SPRETEiJ_G0025528Srsf69861.871ENSSPAG00000002362srsf6a6786.243Stegastes_partitus
MGP_SPRETEiJ_G0025528Srsf66384.706ENSSPAG00000021913-8684.706Stegastes_partitus
MGP_SPRETEiJ_G0025528Srsf69996.176ENSSSCG00000007362SRSF69996.176Sus_scrofa
MGP_SPRETEiJ_G0025528Srsf69483.282ENSTGUG00000003455SRSF69484.098Taeniopygia_guttata
MGP_SPRETEiJ_G0025528Srsf65992.500ENSTRUG00000021397-8792.500Takifugu_rubripes
MGP_SPRETEiJ_G0025528Srsf68871.096ENSTNIG00000001692srsf6a5786.022Tetraodon_nigroviridis
MGP_SPRETEiJ_G0025528Srsf68692.069ENSTBEG00000013448SRSF69292.388Tupaia_belangeri
MGP_SPRETEiJ_G0025528Srsf66995.745ENSTTRG00000015410SRSF68895.633Tursiops_truncatus
MGP_SPRETEiJ_G0025528Srsf610099.259ENSUAMG00000003559SRSF610099.259Ursus_americanus
MGP_SPRETEiJ_G0025528Srsf65795.385ENSUMAG00000001154SRSF69094.845Ursus_maritimus
MGP_SPRETEiJ_G0025528Srsf676100.000ENSVPAG00000003016SRSF674100.000Vicugna_pacos
MGP_SPRETEiJ_G0025528Srsf610079.259ENSVVUG00000019276-10079.259Vulpes_vulpes
MGP_SPRETEiJ_G0025528Srsf65892.308ENSXMAG00000021849srsf6a5586.413Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us